Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_M19
         (585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...   178   9e-47
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           89   1e-19
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.           84   3e-18
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    28   0.19 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   1.8  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   2.4  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       23   7.3  
L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       23   9.6  
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       23   9.6  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   9.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.6  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score =  178 bits (434), Expect = 9e-47
 Identities = 81/153 (52%), Positives = 105/153 (68%), Gaps = 2/153 (1%)
 Frame = -2

Query: 476 PSRAIAVLS-TETIRGNITFTQVQDGK-VHVQGGITGLPPGEYGFHVHEKGDLSGGCVST 303
           P +AI  L  T  + GN+T +Q    + V +   + GL PG++GFH+HEKGDL+ GC ST
Sbjct: 20  PRKAIVYLQGTSGVSGNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTDGCAST 79

Query: 302 GSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLH 123
           G H+NP+   HG PND  RHVGDLGN+  DEN  ++    D  +SL G   +IGRA+V+H
Sbjct: 80  GGHYNPDKVSHGAPNDQVRHVGDLGNIAADENGIAKTSYSDTVVSLYGARSVIGRAIVIH 139

Query: 122 EKADDYGKSDHPDSRKTGNAGGRVACGVIGMRE 24
            + DD GK++HPDS KTGNAGGRVACGVIG+ E
Sbjct: 140 AEVDDLGKTNHPDSLKTGNAGGRVACGVIGILE 172


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 88.6 bits (210), Expect = 1e-19
 Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 4/100 (4%)
 Frame = -2

Query: 293 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 114
           +NP+  DHG P+D N HVGDLGN+V      ++I + + +++L G   IIGR + + E  
Sbjct: 1   YNPDGNDHGAPDDANCHVGDLGNIVAYSTGLAKIQIANKKLTLVGDRSIIGRTLSISEYE 60

Query: 113 DDYGKSDHPDSRKTGNAGGRVACGVIGM-RE---XDKLHM 6
           DD G+  H  S+ TGN+G  +AC +IG+ RE    ++LH+
Sbjct: 61  DDLGRGKHDYSKTTGNSGNCIACAIIGVAREEYFAERLHL 100


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score = 84.2 bits (199), Expect = 3e-18
 Identities = 36/72 (50%), Positives = 51/72 (70%)
 Frame = -2

Query: 245 HVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRKTGN 66
           H GD+GN+V DEN  +++DL   QI+LSG   ++GR++V+H   DD G   H  S+ TG+
Sbjct: 1   HAGDMGNIVADENGEAKVDLTATQIALSGALNVVGRSLVVHADPDDLGVGGHELSKTTGD 60

Query: 65  AGGRVACGVIGM 30
           AG R+ACGVIG+
Sbjct: 61  AGARLACGVIGL 72


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 28.3 bits (60), Expect = 0.19
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
 Frame = -2

Query: 488 GFTTPSRAIAVLSTET-IRGNIT-FTQVQDGKVHVQGGIT---GLPP----GEYGFHVHE 336
           G  TPS   A+ +T+    GN T F Q++     + G  T    +P     G+Y  +  +
Sbjct: 402 GSNTPSNHGALGNTQNNAGGNQTPFGQIKSESNPLGGASTTPTSVPSSNGYGDYMNNCLQ 461

Query: 335 KGDLSGGCVSTGSHFNPEHKDHGHPNDVN 249
            G  SGG  S  SH +P H   G  + VN
Sbjct: 462 SGYFSGGFSSLHSHHSPHHVSPGMGSTVN 490


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 570  SDGSQRENKNAASTNIPGRDRSGDGS 493
            SDGSQR +++ + +    R RS  GS
Sbjct: 1058 SDGSQRRSRSRSRSGSGSRSRSRSGS 1083


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = -2

Query: 299 SHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGP 156
           +H N       HP  +N +  D+ N++   N  S  +  D    LS P
Sbjct: 409 AHLNHLRHKSKHPIPINMNADDMNNILAPGNMGSLNESGDSDAHLSHP 456


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 461 QWRETAW*SRDEPSPERSRPGMLVEAAFLFSRW 559
           +WR T   +  E  P  +RPG  +    +FSR+
Sbjct: 398 KWRPTVNIADYENRPTSTRPGNNLNDVLIFSRF 430


>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 467 RETAW*SRDEPSPERSR 517
           + + W  RDEP+P+R +
Sbjct: 48  QSSEWTGRDEPAPKRRK 64


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 467 RETAW*SRDEPSPERSR 517
           + + W  RDEP+P+R +
Sbjct: 48  QSSEWTGRDEPAPKRRK 64


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
 Frame = -2

Query: 164 SGPHG--IIGRAVVLHEKADDYGKSDHPDSRKTGNAGGR 54
           +GP G  ++GRA      A  +    H     +G  GGR
Sbjct: 41  TGPGGAIVVGRAETPDHLASQHHALSHHAGEPSGGGGGR 79



 Score = 22.6 bits (46), Expect = 9.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 68  CRSSWSPDGHSCHNHQ 115
           CR  +SP    CH H+
Sbjct: 260 CRGLFSPQKFVCHQHE 275


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +1

Query: 133 TALPMMPCGPDSEIWSSTRSILL*WFSSKTTFPRSP 240
           + LP++ CG ++    ++R+    W S+    P  P
Sbjct: 855 STLPILACGQNNVCNYASRNDRTFWLSTSAPIPMMP 890


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,417
Number of Sequences: 2352
Number of extensions: 14047
Number of successful extensions: 49
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)