Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_M16
(734 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1209 + 34948899-34948938,34949086-34949222,34949854-349499... 331 4e-91
11_01_0689 - 5678227-5678343,5678475-5678636,5678751-5678846,567... 259 2e-69
11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 254 4e-68
11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179,566... 247 8e-66
02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 215 3e-56
07_03_1306 - 25643469-25643609,25644008-25644169,25644496-256446... 200 7e-52
03_01_0633 - 4649267-4649383,4649480-4649641,4649735-4649895,465... 191 6e-49
10_01_0343 - 3773274-3773390,3773476-3773637,3773758-3773853,377... 118 5e-27
03_01_0636 - 4664472-4664588,4664695-4664856,4664984-4665061,466... 116 3e-26
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 90 1e-18
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 69 3e-12
08_02_1462 + 27308792-27308924,27309711-27309778,27309854-273101... 39 0.005
05_03_0648 + 16563147-16565557,16565655-16565850 29 2.9
10_08_0353 - 17101261-17102244 29 5.1
01_06_0903 + 32862551-32864752,32865341-32865535,32866219-328665... 28 6.7
>02_05_1209 +
34948899-34948938,34949086-34949222,34949854-34949900,
34949990-34950315,34950640-34950722,34950801-34950876,
34951499-34951656,34951979-34952140,34952235-34952351
Length = 381
Score = 331 bits (813), Expect = 4e-91
Identities = 153/236 (64%), Positives = 184/236 (77%)
Frame = -2
Query: 727 GQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGS 548
G+ +YHFMG STFSQYTVV ++S+ K+ APLDKVCLLGCGV TG GA NTAKVE GS
Sbjct: 139 GKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGS 198
Query: 547 NCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKPIQQV 368
AIF A+RIIG+DI+ KF+VAK FGV EFVNPKD+DKPIQQV
Sbjct: 199 IVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQV 258
Query: 367 LVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRT 188
+VDLTDGG++Y+FECIGNV MR+ALE CHKGWG SVI+GVAA+G+EISTRPFQLVTGR
Sbjct: 259 IVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRV 318
Query: 187 WKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKAXR 20
WKGTAFGG+KSR VP LV++YL K++ +DE+VTH++ L +IN+AF L+H G R
Sbjct: 319 WKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLR 374
>11_01_0689 -
5678227-5678343,5678475-5678636,5678751-5678846,
5679345-5679406,5679648-5679723,5679847-5679929,
5680525-5680853,5681402-5681448,5681707-5681843,
5682093-5682126
Length = 380
Score = 259 bits (634), Expect = 2e-69
Identities = 119/242 (49%), Positives = 160/242 (66%)
Frame = -2
Query: 727 GQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGS 548
GQ +YHF+G STFS+YTVV + K+ AAPLDKVC+L CG+ TG+GA +N AK G
Sbjct: 138 GQPVYHFLGTSTFSEYTVVHVGCVAKIHPAAPLDKVCVLSCGISTGFGATVNVAKPPKGC 197
Query: 547 NCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKPIQQV 368
AIF A+RIIGVD+NP KFE+AKKFG +FVNPKDYDKP+QQV
Sbjct: 198 TVAIFGLGAVGLAAMEGARISGASRIIGVDLNPAKFELAKKFGCTDFVNPKDYDKPVQQV 257
Query: 367 LVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRT 188
++++T+GG++ + EC GN M +A E H GWGV+V++GVA T P + RT
Sbjct: 258 IIEMTNGGVDRSVECTGNAAAMISAFECVHDGWGVAVLVGVAGKDAAFKTHPTNFLNERT 317
Query: 187 WKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKAXRAGVD 8
+GT FG YK R +P +V+ Y+ K+L L++F+TH+VP EIN AF LM +G++ R +
Sbjct: 318 LRGTFFGNYKPRTDLPGVVEMYMNKELELEKFITHSVPFSEINTAFDLMLSGESLRCIIR 377
Query: 7 ME 2
ME
Sbjct: 378 ME 379
>11_01_0686 -
5635207-5635323,5635483-5635644,5635727-5635822,
5635903-5635964,5636046-5636121,5636201-5636283,
5636369-5636694,5637524-5637570,5637668-5637804,
5638064-5638097
Length = 379
Score = 254 bits (623), Expect = 4e-68
Identities = 116/242 (47%), Positives = 158/242 (65%)
Frame = -2
Query: 727 GQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGS 548
G+ +YHF+G STFS+YTV+ + K+ AAPLDKVC+L CG+ TG GA +N AK GS
Sbjct: 137 GKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGS 196
Query: 547 NCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKPIQQV 368
AIF A+RIIG+D+N ++FE A+KFG EFVNPKD+DKP+QQV
Sbjct: 197 TVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQV 256
Query: 367 LVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRT 188
L ++T+GG++ + EC GN+ M A E H GWGV+V++GV E T P + RT
Sbjct: 257 LAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERT 316
Query: 187 WKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKAXRAGVD 8
KGT FG YK R +P +V+ Y++K+L +++F+TH+VP EIN AF LMH G+ R +
Sbjct: 317 LKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIR 376
Query: 7 ME 2
ME
Sbjct: 377 ME 378
>11_01_0688 -
5667539-5667655,5667792-5667953,5668084-5668179,
5668278-5668339,5668434-5668509,5668612-5668694,
5668807-5669132,5669741-5669787,5669900-5670036,
5670135-5670168
Length = 379
Score = 247 bits (604), Expect = 8e-66
Identities = 112/243 (46%), Positives = 156/243 (64%)
Frame = -2
Query: 730 KGQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPG 551
KG+ ++HF+G STFS+YTV+ L K+ APLDKVC+L CG TG+GA +N AK + G
Sbjct: 136 KGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFSTGFGATVNVAKPKKG 195
Query: 550 SNCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKPIQQ 371
AIF A+RIIGVD+NP KFE AKKFG +FVNPKD+ KP+ +
Sbjct: 196 QTVAIFGLGAVGLAAMEGARLSGASRIIGVDLNPAKFEQAKKFGCTDFVNPKDHSKPVHE 255
Query: 370 VLVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGR 191
VL+++T+GGL+ EC GN+ M + E H GWGV+V++GV + T P + +
Sbjct: 256 VLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFLNEK 315
Query: 190 TWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKAXRAGV 11
T KGT FG YK R +P +V+ Y++K+L L++F+TH+VP EIN AF LM G++ R +
Sbjct: 316 TLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVM 375
Query: 10 DME 2
M+
Sbjct: 376 RMD 378
>02_05_0070 - 25584690-25584806,25585151-25585312,25585396-25585491,
25585894-25585955,25586035-25586110,25586195-25586277,
25586456-25586778,25586882-25586928,25587014-25587150,
25587250-25587322,25588159-25588251,25588543-25588632,
25588684-25588786,25588869-25588981,25589181-25589778,
25589888-25590065,25590277-25590296,25590713-25590882,
25591245-25591485,25592997-25593199
Length = 994
Score = 215 bits (525), Expect = 3e-56
Identities = 99/242 (40%), Positives = 148/242 (61%)
Frame = -2
Query: 730 KGQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPG 551
+G+ +YH+ S+FS+YTVV KV P+D++CLL CGV G GAA A + G
Sbjct: 751 RGKPVYHYCAVSSFSEYTVVHSGCAVKVGPTVPMDRICLLSCGVSAGLGAAWKVADISKG 810
Query: 550 SNCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKPIQQ 371
S+ IF A+ IIGVD NP+K E K FGV +F+NP++ ++P+QQ
Sbjct: 811 SSVVIFGLGTVGLSVAQGAKLRGASIIIGVDTNPEKQEKGKAFGVTDFINPEELNEPVQQ 870
Query: 370 VLVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGR 191
V+ LT+GG +Y+FEC+G+ G + AL++C GWG++V +GV A E+S L++GR
Sbjct: 871 VVKRLTNGGADYSFECVGDTGVVSTALQSCSDGWGLTVTLGVPKAKPEVSAHYALLLSGR 930
Query: 190 TWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKAXRAGV 11
T KG+ FGG++ + +P LVD+Y K++ +D+ VTH++ IN+A LM K R +
Sbjct: 931 TLKGSLFGGWRPKSDLPLLVDKYANKEIQVDDLVTHDLSFDYINKALELMLENKCLRCVI 990
Query: 10 DM 5
M
Sbjct: 991 HM 992
>07_03_1306 -
25643469-25643609,25644008-25644169,25644496-25644659,
25645117-25645192,25645569-25645651,25646393-25646669
Length = 300
Score = 200 bits (489), Expect = 7e-52
Identities = 96/244 (39%), Positives = 145/244 (59%), Gaps = 2/244 (0%)
Frame = -2
Query: 727 GQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGS 548
G+ + HF+ S+F++YTVV + K+ P CLL CG+ TG GAA A VEPGS
Sbjct: 48 GEPIRHFLSVSSFAEYTVVDITHIVKLDVGFPPAMACLLSCGISTGVGAAWKVAAVEPGS 107
Query: 547 NCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYD-KPIQQ 371
+ A+F A RIIGVD+NPDKF+V K+ G+ +F+NP D K + +
Sbjct: 108 SVAVFGLGAVGLAVAQGARMRGAKRIIGVDLNPDKFDVGKRLGMTDFINPNDTGGKTVSE 167
Query: 370 VLVDLTDGG-LEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTG 194
V+ ++T GG +Y FECIG+ M A ++ GWG ++++GV+ IS +++ G
Sbjct: 168 VIKEMTGGGGADYCFECIGSTSVMAEAFQSTRNGWGKTILLGVSGNKAPISIPSHEILRG 227
Query: 193 RTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKAXRAG 14
R+ G+ FGG K + +P L +YL+K+L L+EF+TH + +EIN AF L+ GK+ R
Sbjct: 228 RSVIGSLFGGIKPKNDIPMLAQKYLDKELELEEFITHEMGFEEINRAFELLTQGKSIRCI 287
Query: 13 VDME 2
+ M+
Sbjct: 288 IWMD 291
>03_01_0633 -
4649267-4649383,4649480-4649641,4649735-4649895,
4650056-4650080,4650155-4650237,4650332-4650704
Length = 306
Score = 191 bits (465), Expect = 6e-49
Identities = 97/243 (39%), Positives = 140/243 (57%), Gaps = 1/243 (0%)
Frame = -2
Query: 727 GQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGS 548
G ++HF+G S+FS+YTVV + +V A P LL CG TG GAA AKVEPGS
Sbjct: 80 GAPIHHFLGVSSFSEYTVVDANQVVRVDPAVPPATASLLSCGATTGVGAAWKLAKVEPGS 139
Query: 547 NCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDY-DKPIQQ 371
+ AIF +G+ + KKFGV F+NP++ DKP+ Q
Sbjct: 140 SVAIFGLGA-----------------VGLAVAEGARICGKKFGVTHFINPQELGDKPVSQ 182
Query: 370 VLVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGR 191
++++TDGG +Y FECIG M A + +GWG ++I+GV G +S +++ G+
Sbjct: 183 AIIEMTDGGADYCFECIGLASVMSDAFRSSREGWGKTIILGVEMHGAPLSIPSLEILNGK 242
Query: 190 TWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKAXRAGV 11
G+ FGG K ++ +P L D+YL K+L LD+F+TH VPLK+IN AF L+ GK+ R +
Sbjct: 243 CVMGSLFGGVKPKQDIPILADKYLNKELELDKFITHEVPLKDINTAFDLLLQGKSLRCTI 302
Query: 10 DME 2
M+
Sbjct: 303 WMD 305
>10_01_0343 -
3773274-3773390,3773476-3773637,3773758-3773853,
3773956-3774009
Length = 142
Score = 118 bits (284), Expect = 5e-27
Identities = 47/136 (34%), Positives = 86/136 (63%), Gaps = 2/136 (1%)
Frame = -2
Query: 421 GVNEFVNPKDYDKPIQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVA 242
G+ +F+N K KP+ +V++++TDGG++Y+FEC G +R A + H GWG++V++G+
Sbjct: 2 GITDFINSKASGKPVHEVIMEMTDGGVDYSFECTGITDVLREAFVSTHDGWGLTVVLGIH 61
Query: 241 AAGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPL--DEFVTHNVPLK 68
A + P +L GR G FG +K + +P++V++ ++ ++ + D F+T +P
Sbjct: 62 ATPRMLPLHPMELFDGRRITGCVFGDFKGKSQLPEIVEKCMQGEININFDGFITQELPFA 121
Query: 67 EINEAFHLMHAGKAXR 20
+IN+AF L+ GK+ R
Sbjct: 122 DINKAFQLLEEGKSLR 137
>03_01_0636 -
4664472-4664588,4664695-4664856,4664984-4665061,
4665157-4665221,4665476-4665558,4666052-4666414,
4666512-4666555,4666632-4666765,4666881-4666917
Length = 360
Score = 116 bits (278), Expect = 3e-26
Identities = 80/244 (32%), Positives = 117/244 (47%), Gaps = 1/244 (0%)
Frame = -2
Query: 730 KGQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPG 551
+G+ L + ++FSQYTVV + KV A P CLLGC TG +EP
Sbjct: 135 EGKPLSDTVAVTSFSQYTVVDVNQVVKVDPAVPPKIACLLGCCGGTGEPEIRRY--IEPA 192
Query: 550 SNCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDY-DKPIQ 374
+ RI G K+FGV +FVNP DK +
Sbjct: 193 WGRSSMEVGQSATRFVGGCLRAGIRRIGG-----------KEFGVTDFVNPSQLGDKSVS 241
Query: 373 QVLVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTG 194
+V+ +TDGG +Y+FECIG M A G G ++I+GV + + F+ + G
Sbjct: 242 EVINAMTDGGADYSFECIGISSVMTEA------GRGKTIILGVEKDSQPLCLPSFEFLFG 295
Query: 193 RTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKAXRAG 14
+ G+ FGG K + +P L ++ + K+L L++ VTH V L EIN AF L+ GK+ R
Sbjct: 296 KCVMGSLFGGAKPKTDIPILAEKCMNKELELEKLVTHEVGLTEINTAFDLLLQGKSLRCI 355
Query: 13 VDME 2
+ M+
Sbjct: 356 IWMD 359
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 90.2 bits (214), Expect = 1e-18
Identities = 50/110 (45%), Positives = 64/110 (58%)
Frame = -2
Query: 718 LYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCA 539
+YHF+ STF++YTV+ K+ APL+K+ LL CGV TG GAA NTA V GS A
Sbjct: 164 VYHFLNTSTFAEYTVIDSACAVKINPKAPLEKMSLLSCGVSTGVGAAWNTANVSKGSTVA 223
Query: 538 IFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDY 389
IF A+RIIGVDINP+KF +K+ + + N KDY
Sbjct: 224 IFGLGAIGLAVAEGARLRGASRIIGVDINPEKF--SKECALVQ--NDKDY 269
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 69.3 bits (162), Expect = 3e-12
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 2/243 (0%)
Frame = -2
Query: 727 GQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGS 548
G+ +Y + ++Y VV +L + + P + +LGC V T YGA + A++ G
Sbjct: 183 GKPVYMY-SMGGLAEYCVVPANALAVLPNSLPYTESAILGCAVFTAYGALRHAAEMRAGD 241
Query: 547 NCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKPIQQV 368
+ A+ A+ +I VD+ +K + A+ G VN D +
Sbjct: 242 SVAVIGVGGVGSSCLQIAKAFGASEVIAVDVLDEKLQNARTLGATHTVNAAKED--AVEK 299
Query: 367 LVDLTDG-GLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGR 191
+ ++TDG G++ E +G T ++ G G +V+IG+AA +LV R
Sbjct: 300 IKEITDGRGVDVAVEALGKALTFSQCAKSVRDG-GKAVMIGLAATNVMGEVDITRLVR-R 357
Query: 190 TWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGK-AXRAG 14
K G ++R+ +P++V L ++ +E N A+ + GK RA
Sbjct: 358 QVKIIGSYGARARQDLPQIVKLAESGAFNLKNTISRKCKFEEANSAYEDLDRGKIVGRAV 417
Query: 13 VDM 5
V++
Sbjct: 418 VEI 420
>08_02_1462 +
27308792-27308924,27309711-27309778,27309854-27310159,
27310168-27310839
Length = 392
Score = 38.7 bits (86), Expect = 0.005
Identities = 32/155 (20%), Positives = 72/155 (46%), Gaps = 6/155 (3%)
Frame = -2
Query: 475 RIIGVDINPDKFEVAKKFGVNEFVN----PKDYDKPIQQVLVDLTDGGLEYTFECIGNVG 308
R++ VD++ + VA+ G + V +D + ++++ + G ++ + +C G
Sbjct: 236 RVVIVDVDEHRLSVARSLGADAAVRVSARAEDVGEEVERIRAAM-GGDIDVSLDCAGFSK 294
Query: 307 TMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWKGTAFGGYKSRESVPKLVD 128
T+ ALEA +G G ++G+ G T P L + + G ++ +++ P ++
Sbjct: 295 TVATALEAT-RGGGKVCLVGM---GHNEMTVP--LTSAAIREVDVVGIFRYKDTWPLCIE 348
Query: 127 EYLEKKLPLDEFVTHNVPL--KEINEAFHLMHAGK 29
K+ + +TH +++ EAF + G+
Sbjct: 349 FLRSGKIDVKPLITHRFGFSQEDVEEAFEVSARGR 383
>05_03_0648 + 16563147-16565557,16565655-16565850
Length = 868
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Frame = +3
Query: 186 QVRPVTSWN-GRV--LISSPAAATPMIT 260
QVR T+W GRV L+ SPA+A P+IT
Sbjct: 423 QVRDTTAWTLGRVFELLHSPASANPIIT 450
>10_08_0353 - 17101261-17102244
Length = 327
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/98 (21%), Positives = 39/98 (39%)
Frame = -2
Query: 472 IIGVDINPDKFEVAKKFGVNEFVNPKDYDKPIQQVLVDLTDGGLEYTFECIGNVGTMRAA 293
+ +D+ ++ + P+ YD + ++ GG+ C+ G RA
Sbjct: 163 VAALDVAAGEYRILDSSNYGRRFGPRFYDAAMSKIR-----GGVA---RCVAAAG--RAG 212
Query: 292 LEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWKG 179
EA GW + ++ G+ A +E S F + W G
Sbjct: 213 AEADAGGWKLRMVAGLPAQTDESSCGLFAIKCMELWDG 250
>01_06_0903 +
32862551-32864752,32865341-32865535,32866219-32866523,
32866664-32866849,32867137-32867314,32867548-32867574
Length = 1030
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 165 PPKAVPFQVRPVTSWNGRVLISSPAAATPMITDTPHPLWQASSAALMV 308
PP P P S GRV + + AA + DTP +W L++
Sbjct: 88 PPPEAPPAASPSPS-GGRVRLYASAARAKYLVDTPEHIWGRLDEGLLL 134
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,329,126
Number of Sequences: 37544
Number of extensions: 393651
Number of successful extensions: 1145
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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