Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_M16
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 304 3e-83
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 304 3e-83
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 304 3e-83
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 302 1e-82
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z66511-6|CAA91318.1| 343|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z66515-1|CAA91347.1| 218|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical pr... 28 7.9
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 304 bits (747), Expect = 3e-83
Identities = 145/248 (58%), Positives = 178/248 (71%), Gaps = 4/248 (1%)
Frame = -2
Query: 733 CKGQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEP 554
C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TGYGA LNT KVE
Sbjct: 135 CNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEE 194
Query: 553 GSNCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP-- 380
GS A++ A +I+G+D+ KFE AK FG E +NPK + P
Sbjct: 195 GSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELPEG 254
Query: 379 --IQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQ 206
Q LV+ DGG +YTFECIGNV TMR ALEA HKGWGVS IIGVA AG+EI+TRPFQ
Sbjct: 255 KSFQAWLVEQFDGGFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQ 314
Query: 205 LVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKA 26
LVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH + +IN AF ++H G++
Sbjct: 315 LVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHKGES 374
Query: 25 XRAGVDME 2
R+ + E
Sbjct: 375 LRSVLAFE 382
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 304 bits (747), Expect = 3e-83
Identities = 145/248 (58%), Positives = 178/248 (71%), Gaps = 4/248 (1%)
Frame = -2
Query: 733 CKGQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEP 554
C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TGYGA LNT KVE
Sbjct: 135 CNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEE 194
Query: 553 GSNCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP-- 380
GS A++ A +I+G+D+ KFE AK FG E +NPK + P
Sbjct: 195 GSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELPEG 254
Query: 379 --IQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQ 206
Q LV+ DGG +YTFECIGNV TMR ALEA HKGWGVS IIGVA AG+EI+TRPFQ
Sbjct: 255 KSFQAWLVEQFDGGFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQ 314
Query: 205 LVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKA 26
LVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH + +IN AF ++H G++
Sbjct: 315 LVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHKGES 374
Query: 25 XRAGVDME 2
R+ + E
Sbjct: 375 LRSVLAFE 382
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 304 bits (747), Expect = 3e-83
Identities = 145/248 (58%), Positives = 178/248 (71%), Gaps = 4/248 (1%)
Frame = -2
Query: 733 CKGQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEP 554
C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TGYGA LNT KVE
Sbjct: 137 CNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEE 196
Query: 553 GSNCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP-- 380
GS A++ A +I+G+D+ KFE AK FG E +NPK + P
Sbjct: 197 GSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELPEG 256
Query: 379 --IQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQ 206
Q LV+ DGG +YTFECIGNV TMR ALEA HKGWGVS IIGVA AG+EI+TRPFQ
Sbjct: 257 KSFQAWLVEQFDGGFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQ 316
Query: 205 LVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKA 26
LVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH + +IN AF ++H G++
Sbjct: 317 LVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHKGES 376
Query: 25 XRAGVDME 2
R+ + E
Sbjct: 377 LRSVLAFE 384
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 302 bits (742), Expect = 1e-82
Identities = 143/243 (58%), Positives = 174/243 (71%), Gaps = 4/243 (1%)
Frame = -2
Query: 733 CKGQELYHFMGCSTFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEP 554
C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TGYGA LNT KVE
Sbjct: 308 CNGKQLFHFMGCSTFSEYTVVADISLCKVNPQAPLEKVSLLGCGISTGYGAVLNTCKVEE 367
Query: 553 GSNCAIFXXXXXXXXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP-- 380
GS A++ A +I+G+D+ KFE AK FG E +NPK + P
Sbjct: 368 GSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFEKAKMFGATECINPKSVELPEG 427
Query: 379 --IQQVLVDLTDGGLEYTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQ 206
Q LV+ DGG +YTFECIGNV TMR ALEA HKGWGVS IIGVA AG+EI+TRPFQ
Sbjct: 428 KSFQSWLVEQFDGGFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQ 487
Query: 205 LVTGRTWKGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEINEAFHLMHAGKA 26
LVTGRTWKGTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH + +IN AF ++ G+
Sbjct: 488 LVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRCNIDDINAAFDVLRKGEG 547
Query: 25 XRA 17
R+
Sbjct: 548 LRS 550
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 37.1 bits (82), Expect = 0.013
Identities = 48/191 (25%), Positives = 71/191 (37%), Gaps = 2/191 (1%)
Frame = -2
Query: 694 TFSQYTVVXEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXX 515
TF +Y + +I KV+ L + CG T Y +L V+PG +
Sbjct: 128 TFQEYLTIRDIDAIKVSNDTNLAAAAPVLCGGVTAY-KSLKATNVKPGQIVVLTGAGGGL 186
Query: 514 XXXXXXXXXXXANRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP-IQQVLVDLTDGGLE 338
R++ VD + K + + G FV+ +D P I + LT+GG
Sbjct: 187 GSFGIQYAKAMGMRVVAVD-HISKEDHCRNLGAEWFVDA--FDTPDIVAHIRKLTNGGAH 243
Query: 337 YTFECIGNVGTMRAALEACHKGWGVSVIIGVAAAGEEISTRPFQLVTGR-TWKGTAFGGY 161
M ALE K G V +G+ G I L+ T KG+ G
Sbjct: 244 GVVSFAAAKKPMEYALEYVRKR-GTVVFVGLPKDG-TIPLDTLSLICNEITVKGSIVG-- 299
Query: 160 KSRESVPKLVD 128
SR V + +D
Sbjct: 300 -SRMDVDEAID 309
>Z66511-6|CAA91318.1| 343|Caenorhabditis elegans Hypothetical
protein F07A11.5 protein.
Length = 343
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 454 NPDKFEVAKKFGVNEFVNPKDYDKPIQQVLVDLTD 350
N FE+A+ GV F+NP D + + +++L D
Sbjct: 179 NRRAFEIARSHGVTTFLNPAPGDPNMDKTILELVD 213
>Z66515-1|CAA91347.1| 218|Caenorhabditis elegans Hypothetical
protein R53.2 protein.
Length = 218
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 148 SVPKLVDEYLEKKLPLDEFVTH 83
S+ KL+D+YL K++ +DE H
Sbjct: 59 SIGKLIDQYLRKEIDMDEHALH 80
>Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical
protein F32A11.6 protein.
Length = 367
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +3
Query: 165 PPKAVPFQVRPVTSWNGRVLISSPAAATPMITDTPHPLWQASSAALMVP 311
P + Q P+ S + + SP A T PHP W S++ +P
Sbjct: 246 PMGGLEMQSSPMKSSSDSSHMRSPMAQMNCETTRPHPSWPLESSSFFLP 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,164,211
Number of Sequences: 27780
Number of extensions: 325846
Number of successful extensions: 867
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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