Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_M15
         (818 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   3.9  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   3.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   6.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   6.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   6.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   6.7  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 411 SSNLYVRQSFLFSFIP 364
           +S  Y RQ+F+FS IP
Sbjct: 181 ASTRYARQTFIFSAIP 196


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 415 LSIDFIQQLLLTVQSHLRSVLK 480
           +S DFIQQ++L V + +++  K
Sbjct: 168 ISADFIQQIMLFVSALIKAFSK 189


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 415 LSIDFIQQLLLTVQSHLRSVLK 480
           +S DFIQQ++L V + +++  K
Sbjct: 168 ISADFIQQIMLFVSALIKAFSK 189


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 769  SFIGIFKCMILLH 807
            S  G+FKCM+  H
Sbjct: 1112 SLAGLFKCMLCTH 1124


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 769  SFIGIFKCMILLH 807
            S  G+FKCM+  H
Sbjct: 1112 SLAGLFKCMLCTH 1124


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 769  SFIGIFKCMILLH 807
            S  G+FKCM+  H
Sbjct: 1112 SLAGLFKCMLCTH 1124


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 769  SFIGIFKCMILLH 807
            S  G+FKCM+  H
Sbjct: 1112 SLAGLFKCMLCTH 1124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,957
Number of Sequences: 336
Number of extensions: 3182
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)