Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_M13
(590 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007502-1|AAH07502.1| 106|Homo sapiens HIG1 domain family, mem... 56 9e-08
BC000587-1|AAH00587.1| 106|Homo sapiens Unknown (protein for MG... 56 9e-08
BC040890-1|AAH40890.1| 106|Homo sapiens HIGD2BP protein protein. 44 3e-04
CR457385-1|CAG33666.1| 93|Homo sapiens HIG1 protein. 29 9.3
BC070277-1|AAH70277.1| 93|Homo sapiens HIG1 domain family, mem... 29 9.3
BC009594-1|AAH09594.1| 93|Homo sapiens HIG1 domain family, mem... 29 9.3
BC009583-1|AAH09583.1| 93|Homo sapiens HIG1 domain family, mem... 29 9.3
BC000601-1|AAH00601.1| 93|Homo sapiens HIG1 domain family, mem... 29 9.3
AF145385-1|AAD33954.1| 93|Homo sapiens hypoxia-inducbile gene ... 29 9.3
>BC007502-1|AAH07502.1| 106|Homo sapiens HIG1 domain family, member
2A protein.
Length = 106
Score = 56.0 bits (129), Expect = 9e-08
Identities = 27/55 (49%), Positives = 34/55 (61%)
Frame = -1
Query: 272 ETTREKFHRKFTENPFVPLGCLATAGALSMGLWSFRTGKTXXXXXXXXXXMLAQG 108
E+ +EKF RK ENP VP+GCLATA AL+ GL+SF G + + AQG
Sbjct: 33 ESFKEKFVRKTRENPVVPIGCLATAAALTYGLYSFHRGNSQRSQLMMRTRIAAQG 87
>BC000587-1|AAH00587.1| 106|Homo sapiens Unknown (protein for
MGC:2198) protein.
Length = 106
Score = 56.0 bits (129), Expect = 9e-08
Identities = 27/55 (49%), Positives = 34/55 (61%)
Frame = -1
Query: 272 ETTREKFHRKFTENPFVPLGCLATAGALSMGLWSFRTGKTXXXXXXXXXXMLAQG 108
E+ +EKF RK ENP VP+GCLATA AL+ GL+SF G + + AQG
Sbjct: 33 ESFKEKFVRKTRENPVVPIGCLATAAALTYGLYSFHRGNSQRSQLMMRTRIAAQG 87
>BC040890-1|AAH40890.1| 106|Homo sapiens HIGD2BP protein protein.
Length = 106
Score = 44.4 bits (100), Expect = 3e-04
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = -1
Query: 272 ETTREKFHRKFTENPFVPLGCLATAGALSMGLWSFRTGKTXXXXXXXXXXMLAQG 108
E +EKF RK ENP VP+G L TA L+ GL+ F G + + AQG
Sbjct: 33 EGFKEKFLRKTRENPVVPIGFLCTAAVLTNGLYCFHQGNSQCSRLMMHTQIAAQG 87
>CR457385-1|CAG33666.1| 93|Homo sapiens HIG1 protein.
Length = 93
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 272 ETTREKFHRKFTENPFVPLGCLATAGALSMGLWSFRT-GKTXXXXXXXXXXMLAQG 108
E K RK E PFVP+G A ++ GL+ ++ G T + AQG
Sbjct: 14 EDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQG 69
>BC070277-1|AAH70277.1| 93|Homo sapiens HIG1 domain family, member
1A protein.
Length = 93
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 272 ETTREKFHRKFTENPFVPLGCLATAGALSMGLWSFRT-GKTXXXXXXXXXXMLAQG 108
E K RK E PFVP+G A ++ GL+ ++ G T + AQG
Sbjct: 14 EDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQG 69
>BC009594-1|AAH09594.1| 93|Homo sapiens HIG1 domain family, member
1A protein.
Length = 93
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 272 ETTREKFHRKFTENPFVPLGCLATAGALSMGLWSFRT-GKTXXXXXXXXXXMLAQG 108
E K RK E PFVP+G A ++ GL+ ++ G T + AQG
Sbjct: 14 EDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQG 69
>BC009583-1|AAH09583.1| 93|Homo sapiens HIG1 domain family, member
1A protein.
Length = 93
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 272 ETTREKFHRKFTENPFVPLGCLATAGALSMGLWSFRT-GKTXXXXXXXXXXMLAQG 108
E K RK E PFVP+G A ++ GL+ ++ G T + AQG
Sbjct: 14 EDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQG 69
>BC000601-1|AAH00601.1| 93|Homo sapiens HIG1 domain family, member
1A protein.
Length = 93
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 272 ETTREKFHRKFTENPFVPLGCLATAGALSMGLWSFRT-GKTXXXXXXXXXXMLAQG 108
E K RK E PFVP+G A ++ GL+ ++ G T + AQG
Sbjct: 14 EDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQG 69
>AF145385-1|AAD33954.1| 93|Homo sapiens hypoxia-inducbile gene 1
protein.
Length = 93
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 272 ETTREKFHRKFTENPFVPLGCLATAGALSMGLWSFRT-GKTXXXXXXXXXXMLAQG 108
E K RK E PFVP+G A ++ GL+ ++ G T + AQG
Sbjct: 14 EDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQG 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,803,097
Number of Sequences: 237096
Number of extensions: 1258961
Number of successful extensions: 2473
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2462
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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