Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_M12
(470 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 23 1.6
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 2.9
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 2.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 5.0
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 6.7
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 8.8
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 8.8
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 8.8
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 8.8
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 8.8
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 21 8.8
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 23.0 bits (47), Expect = 1.6
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 428 LWCVDSSSLNHLRCFCS 378
LW +DS +N+++ CS
Sbjct: 139 LWVLDSGLINNIQLMCS 155
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.2 bits (45), Expect = 2.9
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1
Query: 98 KIKILPCLLPTP 63
+++ LPCLLP P
Sbjct: 622 ELRTLPCLLPRP 633
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.2 bits (45), Expect = 2.9
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1
Query: 98 KIKILPCLLPTP 63
+++ LPCLLP P
Sbjct: 590 ELRTLPCLLPRP 601
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 5.0
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = +2
Query: 368 NKLSNKNTSNDLDSNCQR 421
N +N N +N+ ++NC++
Sbjct: 336 NNYNNNNYNNNYNNNCKK 353
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.0 bits (42), Expect = 6.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 428 LWCVDSSSLNHLRCFCS 378
LW +DS +N+ + CS
Sbjct: 139 LWILDSGIINNTQPMCS 155
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 428 LWCVDSSSLNHLRCFCS 378
LW +DS +N+ + CS
Sbjct: 140 LWVLDSGLVNNTQPMCS 156
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 428 LWCVDSSSLNHLRCFCS 378
LW +DS +N+ + CS
Sbjct: 135 LWVLDSGLVNNTQPMCS 151
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = -2
Query: 298 PPYWAVSQLRLKGRVTDG 245
PP W +L GR+ G
Sbjct: 125 PPPWETDSYKLIGRIAAG 142
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 428 LWCVDSSSLNHLRCFCS 378
LW +DS +N+ + CS
Sbjct: 135 LWVLDSGLVNNTQPMCS 151
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 428 LWCVDSSSLNHLRCFCS 378
LW +DS +N+ + CS
Sbjct: 135 LWVLDSGLVNNTQPMCS 151
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 298 PPYWAVSQLRLKGRVTDG 245
PP+W Q RL ++ G
Sbjct: 110 PPFWDEDQHRLYAQIKTG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,632
Number of Sequences: 438
Number of extensions: 2671
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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