Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_M10
         (850 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0246 + 28634530-28634735,28634841-28634901,28634996-286350...    72   7e-13
02_05_0481 + 29361542-29361669,29362091-29362341,29362820-293630...    30   2.0  
06_02_0068 + 11107493-11107653,11109116-11109218,11109311-111094...    29   4.7  

>05_07_0246 +
           28634530-28634735,28634841-28634901,28634996-28635088,
           28635326-28635391,28635506-28635576,28636225-28636329,
           28637065-28637134
          Length = 223

 Score = 71.7 bits (168), Expect = 7e-13
 Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
 Frame = -1

Query: 805 EIEVIELIEPSGWEMIPIKDIHDRP--IRTYMIQIAVLSNHQNGRDTHMRQIKVHSPCEP 632
           EI+ +EL +P GW  I +     R   I T+M+QI+VLSNH NGRDTH+RQIK++ P  P
Sbjct: 143 EIKTVELSKPVGWVHISLSGADPRETFIHTFMLQISVLSNHLNGRDTHIRQIKIYGP-RP 201

Query: 631 TSFDINKFRNFSTVQFQQYATIR 563
                  F +F++ +F  Y+T+R
Sbjct: 202 NHVPHQPF-HFTSREFVTYSTVR 223


>02_05_0481 + 29361542-29361669,29362091-29362341,29362820-29363002,
            29363099-29363206,29363583-29363697,29363781-29364819,
            29364904-29365014,29365268-29365326,29366601-29366763,
            29367162-29367435,29367530-29367680,29367766-29367877,
            29367978-29368143,29368261-29368331,29368474-29368565,
            29368721-29368883,29369134-29369205,29369236-29369263,
            29369519-29369910,29369991-29370106,29370201-29370498,
            29370820-29371139,29371332-29371590,29371985-29372302,
            29372423-29372527,29372648-29372776,29374001-29374381,
            29374467-29374604,29374949-29375185,29375264-29375569
          Length = 2094

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +2

Query: 119  LSVSCLLVIIFLTFXGKVGQSWLA*LFHLTFSFLYLV 229
            + V+CLLVI+FL F   V   W +  F+LT + + LV
Sbjct: 899  VGVACLLVILFLVFAIGVIHYWTSNNFYLTRTQMLLV 935


>06_02_0068 + 11107493-11107653,11109116-11109218,11109311-11109423,
            11109502-11109624,11110165-11110266,11110367-11110532,
            11111215-11111331,11111438-11111478,11111735-11111836,
            11111924-11112140,11112271-11112498,11112580-11112707,
            11112804-11112921,11113020-11113235,11113314-11113463,
            11113553-11113629,11113973-11114190,11114443-11114656,
            11114744-11114823,11114898-11115015,11115092-11115262,
            11116124-11116292,11116404-11116447,11116620-11116662,
            11116743-11116888,11118337-11118431,11118579-11119477,
            11120540-11120638,11120907-11121002,11123447-11123568,
            11123675-11123767,11123922-11124114
          Length = 1653

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 19/91 (20%), Positives = 38/91 (41%)
 Frame = -1

Query: 826  THFNDXQEIEVIELIEPSGWEMIPIKDIHDRPIRTYMIQIAVLSNHQNGRDTHMRQIKVH 647
            +HF   + +E   +IEP    +IP      +  R  ++  A L N      +   + + +
Sbjct: 901  SHFQAWK-LESASIIEPPCNFIIPFHSQGKKRPRWALVDKAHLHNTWRSSQSSYHRYRTN 959

Query: 646  SPCEPTSFDINKFRNFSTVQFQQYATIR*YN 554
            +   P+S  +N   +   +    Y T+R Y+
Sbjct: 960  ADVSPSSLMVNLMNDLLDLSLHNYETVRSYS 990


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,777,871
Number of Sequences: 37544
Number of extensions: 299748
Number of successful extensions: 511
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)