Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_M10
         (850 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_6165| Best HMM Match : No HMM Matches (HMM E-Value=.)              103   2e-22
SB_3985| Best HMM Match : C2 (HMM E-Value=0)                           31   1.6  
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)        28   8.3  

>SB_6165| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 223

 Score =  103 bits (247), Expect = 2e-22
 Identities = 49/97 (50%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
 Frame = -1

Query: 850 SRISIRAGTHFNDXQEIEVIELIEPSGWEMIPIKDIHDRPIRTYMIQIAVLSNHQNGRDT 671
           S+IS+RAG  F+D  +IE+I+L EP+GW  + + +  DRPIRTYM+Q+AVL+NHQNGRDT
Sbjct: 131 SKISVRAGNSFHDLHQIELIQLDEPTGWLTVSLNE-GDRPIRTYMLQVAVLANHQNGRDT 189

Query: 670 HMRQIKVHSP-CEPTSFDINKFRNFSTVQFQQYATIR 563
           HMRQIK+ +P C+  + D+     F++V    Y+ +R
Sbjct: 190 HMRQIKIFAPLCDAVNPDM---PTFTSVDCAMYSCVR 223


>SB_3985| Best HMM Match : C2 (HMM E-Value=0)
          Length = 835

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +2

Query: 8   YINYVFAWAVVVNSNFISQAFSLFKKKSHPKPCTWAFLS 124
           Y+++ FAW V++   F+S  F + KK  H +    A +S
Sbjct: 123 YMHFSFAWIVMILMIFVSWQFEIEKKTKHRENMVQAHMS 161


>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
          Length = 2122

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = -1

Query: 826  THFNDXQEIEVIELIEPSGWEMIPIKDIHDRPIRTYMIQIAVLSNHQNGRDTHMRQIKV 650
            T  ND  + E+IEL E +  +   + +I+DR    Y +QIA L N    +   + Q+++
Sbjct: 1863 TKENDTLQKEIIELREENISQKSKLYEINDR----YELQIAELKNDNEIKQDKIEQLEI 1917


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,658,890
Number of Sequences: 59808
Number of extensions: 386764
Number of successful extensions: 717
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)