Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_M10
         (850 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024796-1|ABB88219.1|  210|Caenorhabditis elegans Hypothetical ...    64   9e-11
Z73972-5|CAA98261.2|  201|Caenorhabditis elegans Hypothetical pr...    48   6e-06
Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z83319-5|CAB05907.2|  446|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>AC024796-1|ABB88219.1|  210|Caenorhabditis elegans Hypothetical
           protein Y48G1C.12 protein.
          Length = 210

 Score = 64.5 bits (150), Expect = 9e-11
 Identities = 26/70 (37%), Positives = 42/70 (60%)
 Frame = -1

Query: 850 SRISIRAGTHFNDXQEIEVIELIEPSGWEMIPIKDIHDRPIRTYMIQIAVLSNHQNGRDT 671
           S+I ++ G+   D    +     EP GW  I ++D + +P R + +Q+ V+ NHQNGRDT
Sbjct: 94  SKIQVKMGSSHQDIFFRQTQTFNEPQGWTFIDLRDKNGKPNRVFWLQVQVIQNHQNGRDT 153

Query: 670 HMRQIKVHSP 641
           H+R ++V  P
Sbjct: 154 HIRHVRVLGP 163


>Z73972-5|CAA98261.2|  201|Caenorhabditis elegans Hypothetical
           protein F15H10.3 protein.
          Length = 201

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = -1

Query: 781 EPSGWEMIPIKDIHDRPIRTYMIQIAVLSNHQNGRDTHMRQIKVHSP 641
           +P GW  IPI D    P+R   +Q+ ++ NH+ GRD  +R  +V  P
Sbjct: 115 QPKGWVKIPIHDAFGNPLRVMSLQMTIMKNHEKGRDCVVRHFRVLGP 161


>Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical
           protein R11A8.4 protein.
          Length = 607

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +2

Query: 38  VVNSNFISQAFSLFKKKSHPKPCTWAFLSVSC 133
           + N N ++ A  LFK K H    T A +SVSC
Sbjct: 129 LTNYNSLADAVELFKTKKHILVLTGAGVSVSC 160


>Z83319-5|CAB05907.2|  446|Caenorhabditis elegans Hypothetical
           protein T02D1.4 protein.
          Length = 446

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 20/63 (31%), Positives = 31/63 (49%)
 Frame = +2

Query: 524 RIHSFNRQK*IILSYSGILLELNS*KISKLIYIKRGRFTW*MHFDLSHMCITTILMITQN 703
           +IH+F      I+   G+LL + +  + KL+ +KR  F    HF     C+T I +IT  
Sbjct: 259 KIHTFANLLFAIVVPMGLLLFMAASILWKLV-LKRSDFV--SHFTAEKRCVTRITLITTG 315

Query: 704 CYL 712
             L
Sbjct: 316 LQL 318


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,910,962
Number of Sequences: 27780
Number of extensions: 324244
Number of successful extensions: 671
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)