Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_L24
(697 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35) 145 3e-35
SB_30177| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 4e-24
SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 4e-16
SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09) 50 1e-06
SB_19024| Best HMM Match : Thiolase_C (HMM E-Value=5.4e-36) 36 0.041
SB_1573| Best HMM Match : Thiolase_C (HMM E-Value=1.6e-40) 36 0.041
SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40) 29 4.8
SB_14132| Best HMM Match : dCMP_cyt_deam (HMM E-Value=7.6e-05) 28 6.3
>SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35)
Length = 415
Score = 145 bits (351), Expect = 3e-35
Identities = 70/119 (58%), Positives = 84/119 (70%)
Frame = -1
Query: 697 IFAEDEEYXRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKP 518
+F EDEEY +V+FEKF L TVF+KENGTVTA NASTLNDG A++ V P
Sbjct: 115 VFEEDEEYKKVSFEKFPSLKTVFKKENGTVTAANASTLNDGAAAVVLMTREAAEKNGVTP 174
Query: 517 IARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLL 341
+A IV FAD PIDFPIAPA AIPK+L +RK+D+ +WEINEAFS VA+AN +L
Sbjct: 175 LASIVAFADAAVAPIDFPIAPAAAIPKVLRLAHLRKDDIDMWEINEAFSAVALANINVL 233
>SB_30177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 643
Score = 108 bits (260), Expect = 4e-24
Identities = 59/142 (41%), Positives = 81/142 (57%), Gaps = 2/142 (1%)
Frame = -1
Query: 580 DGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDV 401
DG K + P+AR+V ++ DP I P +I LE+ G +D+
Sbjct: 20 DGAAALVLASEKAVKDHGLTPLARLVSYSINGVDPAIMGIGPVPSIKCALERAGKTLDDM 79
Query: 400 ALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCH-ALKKGE 224
+ E+NEAF+ +A QK LGLD SK NV+GGA++LGHP+G SGAR+ VHL H ++KG
Sbjct: 80 DIIEVNEAFAPQFLAVQKDLGLDMSKTNVNGGAIALGHPVGTSGARLTVHLTHEMMRKGL 139
Query: 223 K-GVASICNGGGGASSVMIEKM 161
K + S C GGG S M + M
Sbjct: 140 KYSIGSACIGGGQESFSMTDSM 161
>SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 82.2 bits (194), Expect = 4e-16
Identities = 53/128 (41%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Frame = -1
Query: 658 EKFTKLSTVFQKEN-GTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGEC 482
E KL F + GTV+AGN S LNDG A NV P+AR+V +A
Sbjct: 231 EGLRKLKPCFLFDGKGTVSAGNTSGLNDGAAVVVLMPYAEANARNVSPLARVVSWAQAGV 290
Query: 481 DPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGA 302
DP P A K L K G + EDV L+E+NEAF+ + A + LGLDPSK NV
Sbjct: 291 DPSVMGTGPIPATRKALSKAGWKVEDVDLFELNEAFAAQSCAVIRELGLDPSK-NVVDCE 349
Query: 301 VSLGHPIG 278
L H +G
Sbjct: 350 TRLDHALG 357
>SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09)
Length = 162
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/97 (34%), Positives = 49/97 (50%)
Frame = -1
Query: 658 EKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECD 479
++ KL F + GT+TA N+S L DG A + +KP A +
Sbjct: 78 QQMAKLKPAFIRPFGTITAANSSFLTDGASACLVMCEEKALSMGLKPKAYL--------- 128
Query: 478 PIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSV 368
+PA A PKLLEKTG++ D+ ++E +EAF+V
Sbjct: 129 ------SPAYATPKLLEKTGLKLSDIDVFEFHEAFAV 159
>SB_19024| Best HMM Match : Thiolase_C (HMM E-Value=5.4e-36)
Length = 330
Score = 35.5 bits (78), Expect = 0.041
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Frame = -1
Query: 499 FADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGL-DPSK 323
F +G C + A +L +KTG+ +DV + E+++ FS + + LGL D K
Sbjct: 9 FDEGNCIKLVGYDMTKTAAKRLFDKTGLSPKDVDVVELHDCFSTNELLTYEALGLCDEGK 68
Query: 322 -----------------INVHGGAVSLGHPIGMSG 269
+N GG +S GHP+G +G
Sbjct: 69 AGEMVDRGDNTYGGKYVVNPSGGLISKGHPLGATG 103
>SB_1573| Best HMM Match : Thiolase_C (HMM E-Value=1.6e-40)
Length = 331
Score = 35.5 bits (78), Expect = 0.041
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Frame = -1
Query: 499 FADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGL-DPSK 323
F +G C + A +L +KTG+ +DV + E+++ FS + + LGL D K
Sbjct: 154 FDEGNCIKLVGYDMTKTAAKRLFDKTGLSPKDVDVVELHDCFSTNELLTYEALGLCDEGK 213
Query: 322 -----------------INVHGGAVSLGHPIGMSG 269
+N GG +S GHP+G +G
Sbjct: 214 AGEMVDRGDNTYGGKYVVNPSGGLISKGHPLGATG 248
>SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 694 FAEDEEYX-RVNFEKFTKLSTVFQKENGTVTAGNAS 590
FA DE E+ KL VF+K NGTV+AGNAS
Sbjct: 875 FAVDEHPRPETTIEQLAKLPAVFKK-NGTVSAGNAS 909
>SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)
Length = 1740
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 189 PPPPLQIEATPF--SPFFKAWHRCTTMRAPDIPIG*PKLTAPPCTLIFD 329
P P +EA P +PF + R T + P + IG P+L P ++I D
Sbjct: 225 PDTPKLMEALPILKTPFLRENPRLMTKKPPLVVIGKPRLVFFPYSVIVD 273
>SB_14132| Best HMM Match : dCMP_cyt_deam (HMM E-Value=7.6e-05)
Length = 423
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -1
Query: 385 NEAFSVVAVANQKLLGLDPSKINVHGGAVSL 293
N+ SV+ + + + L +D S+ +VHGG + L
Sbjct: 29 NKVGSVIVLPSDRALSVDCSRNDVHGGVIGL 59
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,792,250
Number of Sequences: 59808
Number of extensions: 410485
Number of successful extensions: 1059
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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