Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_L22
(643 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P12004 Cluster: Proliferating cell nuclear antigen; n=8... 256 4e-67
UniRef50_Q9ZW35 Cluster: Proliferating cell nuclear antigen 2; n... 225 5e-58
UniRef50_Q9VIT0 Cluster: CG10262-PA; n=3; Sophophora|Rep: CG1026... 188 1e-46
UniRef50_A6RIU4 Cluster: Proliferating cell nuclear antigen; n=2... 169 4e-41
UniRef50_O02115 Cluster: Proliferating cell nuclear antigen; n=6... 163 2e-39
UniRef50_A0BN24 Cluster: Proliferating cell nuclear antigen; n=4... 157 3e-37
UniRef50_Q8GZE5 Cluster: Proliferating cell nuclear antigen; n=1... 152 8e-36
UniRef50_P11038 Cluster: Probable DNA polymerase sliding clamp; ... 151 1e-35
UniRef50_Q5CW01 Cluster: Proliferating cell nuclear antigen PCNA... 146 4e-34
UniRef50_Q5K7Y2 Cluster: Proliferating cell nuclear antigen; n=1... 140 2e-32
UniRef50_P15873 Cluster: Proliferating cell nuclear antigen; n=1... 128 9e-29
UniRef50_A2DQV2 Cluster: Proliferating cell nuclear antigen, put... 126 3e-28
UniRef50_Q8X1W1 Cluster: Proliferating cell nuclear antigen; n=1... 120 4e-26
UniRef50_Q98SC0 Cluster: Proliferating cell nuclear antigen; n=1... 118 9e-26
UniRef50_Q4P3B0 Cluster: Proliferating cell nuclear antigen; n=1... 118 2e-25
UniRef50_P61074 Cluster: Proliferating cell nuclear antigen; n=8... 107 3e-22
UniRef50_Q9NGR7 Cluster: Proliferating cell nuclear antigen 1; n... 100 6e-22
UniRef50_Q5CJE0 Cluster: Proliferating cell nuclear antigen; n=2... 105 7e-22
UniRef50_A5Z0S2 Cluster: Proliferating cell nuclear antigen 2; n... 100 3e-20
UniRef50_Q4A3A5 Cluster: Putative proliferating cell nuclear ant... 96 6e-19
UniRef50_A2F7D4 Cluster: Proliferating cell nuclear antigen, put... 94 3e-18
UniRef50_Q4QF35 Cluster: Proliferating cell nuclear antigen; n=6... 93 4e-18
UniRef50_A7AVH8 Cluster: Proliferating cell nuclear antigen 1; n... 91 3e-17
UniRef50_O10308 Cluster: Probable DNA polymerase sliding clamp; ... 83 7e-15
UniRef50_UPI000049949B Cluster: proliferating cell nuclear antig... 82 1e-14
UniRef50_Q8WSN0 Cluster: Proliferating cell nuclear antigen 2; n... 79 7e-14
UniRef50_A7AUH5 Cluster: Proliferating cell nuclear antigen; n=3... 79 9e-14
UniRef50_A7K9E0 Cluster: Putative uncharacterized protein Z530L;... 75 1e-12
UniRef50_A7KA48 Cluster: Putative uncharacterized protein Z788R;... 75 2e-12
UniRef50_Q3LWE0 Cluster: Proliferating cell nuclear antigen; n=1... 74 3e-12
UniRef50_Q84513 Cluster: Probable DNA polymerase sliding clamp 1... 72 1e-11
UniRef50_A7IV77 Cluster: Putative uncharacterized protein M697L;... 66 9e-10
UniRef50_O41056 Cluster: Probable DNA polymerase sliding clamp 2... 60 3e-08
UniRef50_Q8QNE7 Cluster: EsV-1-132; n=2; Phaeovirus|Rep: EsV-1-1... 60 6e-08
UniRef50_A0RXH7 Cluster: DNA polymerase sliding clamp subunit; n... 60 6e-08
UniRef50_Q9NGR6 Cluster: Proliferating cell nuclear antigen 2; n... 57 3e-07
UniRef50_Q8SRV9 Cluster: Proliferating cell nuclear antigen; n=1... 57 3e-07
UniRef50_Q8ZTY0 Cluster: DNA polymerase sliding clamp A; n=4; Py... 51 3e-05
UniRef50_UPI00015BB110 Cluster: proliferating cell nuclear antig... 50 4e-05
UniRef50_Q97Z84 Cluster: DNA polymerase sliding clamp C; n=3; Su... 50 4e-05
UniRef50_Q6LWJ8 Cluster: DNA polymerase sliding clamp; n=8; cell... 47 3e-04
UniRef50_Q9YEZ5 Cluster: DNA polymerase sliding clamp B2; n=1; A... 47 4e-04
UniRef50_A3DM84 Cluster: DNA polymerase sliding clamp; n=1; Stap... 46 6e-04
UniRef50_A2BN98 Cluster: DNA polymerase sliding clamp B2; n=1; H... 46 0.001
UniRef50_Q7T6Y0 Cluster: Probable DNA polymerase sliding clamp; ... 45 0.001
UniRef50_Q550G9 Cluster: Proliferating cell nuclear antigen fami... 44 0.002
UniRef50_O29912 Cluster: DNA polymerase sliding clamp; n=1; Arch... 44 0.004
UniRef50_A2BIU0 Cluster: DNA polymerase sliding clamp subunit; n... 43 0.005
UniRef50_P38252 Cluster: Putative uncharacterized protein YBR089... 43 0.007
UniRef50_Q8TWK3 Cluster: DNA polymerase sliding clamp; n=1; Meth... 40 0.039
UniRef50_O73947 Cluster: DNA polymerase sliding clamp; n=7; Ther... 40 0.067
UniRef50_Q74MV1 Cluster: DNA polymerase sliding clamp; n=2; Nano... 39 0.089
UniRef50_A1RXU8 Cluster: DNA polymerase sliding clamp; n=1; Ther... 38 0.27
UniRef50_Q975M2 Cluster: DNA polymerase sliding clamp B; n=3; Su... 38 0.27
UniRef50_A2BMA5 Cluster: DNA polymerase sliding clamp subunit; n... 37 0.36
UniRef50_Q973F5 Cluster: DNA polymerase sliding clamp C; n=2; Su... 37 0.48
UniRef50_Q9Y9V7 Cluster: DNA polymerase sliding clamp B1; n=1; A... 35 1.9
UniRef50_Q5JH70 Cluster: Oligosaccharyl transferase, STT3 subuni... 33 4.4
UniRef50_P38947 Cluster: Succinate-semialdehyde dehydrogenase [N... 33 5.9
UniRef50_A7JF77 Cluster: Putative uncharacterized protein; n=9; ... 33 7.7
UniRef50_A3DP96 Cluster: DNA polymerase sliding clamp; n=1; Stap... 33 7.7
>UniRef50_P12004 Cluster: Proliferating cell nuclear antigen; n=83;
Eukaryota|Rep: Proliferating cell nuclear antigen - Homo
sapiens (Human)
Length = 261
Score = 256 bits (626), Expect = 4e-67
Identities = 115/179 (64%), Positives = 147/179 (82%)
Frame = -2
Query: 642 CAGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMP 463
CAG++D +T +A+DNAD + VFE+PNQEKVSDYEMKLM+LD+E LGIPE EYSC ++MP
Sbjct: 81 CAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMP 140
Query: 462 SSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXX 283
S EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+KL+QT+++DK
Sbjct: 141 SGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIEMN 200
Query: 282 XXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEED 106
V LTFA +YLN+FTKAT LS V LSMSADVPLVVEY+I D+GH++YYLAPKIE+E+
Sbjct: 201 EPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADMGHLKYYLAPKIEDEE 259
>UniRef50_Q9ZW35 Cluster: Proliferating cell nuclear antigen 2;
n=60; Eukaryota|Rep: Proliferating cell nuclear antigen
2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 264
Score = 225 bits (551), Expect = 5e-58
Identities = 101/179 (56%), Positives = 138/179 (77%)
Frame = -2
Query: 642 CAGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMP 463
CAG+ D +T KA D +D VTF+FESP Q+K++D+EMKLM++D EHLGIP+ EY +RMP
Sbjct: 81 CAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPDAEYHSIVRMP 140
Query: 462 SSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXX 283
S EF+RIC+DLS G+++VIS TKEGVKFS GDIG+AN+ L Q ++DK
Sbjct: 141 SGEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMN 200
Query: 282 XXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEED 106
V+L+FA +Y+N FTKAT LS V +S+S+++P+VVEY++ ++G+IRYYLAPKIEEE+
Sbjct: 201 EPVSLSFALRYMNSFTKATPLSETVTISLSSELPVVVEYKVAEMGYIRYYLAPKIEEEE 259
>UniRef50_Q9VIT0 Cluster: CG10262-PA; n=3; Sophophora|Rep:
CG10262-PA - Drosophila melanogaster (Fruit fly)
Length = 255
Score = 188 bits (458), Expect = 1e-46
Identities = 88/179 (49%), Positives = 126/179 (70%)
Frame = -2
Query: 642 CAGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMP 463
CA D VT KA D + +T FES +E+ +DYE+KL+NLD +H+ IP+ +Y+C I++P
Sbjct: 81 CANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLNLDQDHMEIPKKDYTCFIQLP 140
Query: 462 SSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXX 283
SSEFARICRD+S F ES+ I+C+ +G++F A GD+G+AN++L+ ++D
Sbjct: 141 SSEFARICRDMSMFDESLTIACSSKGIRFLAKGDLGTANIQLSAGTAMD-----VSIEVQ 195
Query: 282 XXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEED 106
VT +FA +YLN FTKAT L+ +V+L +S + PL+VEY I D GHIRYYLAPK+ + D
Sbjct: 196 EPVTQSFAGRYLNTFTKATPLADRVKLYLSDERPLLVEYPIEDYGHIRYYLAPKVNDPD 254
>UniRef50_A6RIU4 Cluster: Proliferating cell nuclear antigen; n=2;
Sclerotiniaceae|Rep: Proliferating cell nuclear antigen
- Botryotinia fuckeliana B05.10
Length = 259
Score = 169 bits (412), Expect = 4e-41
Identities = 82/178 (46%), Positives = 119/178 (66%)
Frame = -2
Query: 639 AGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPS 460
A ++D +T KA+D D + VFES +++S+Y++KLM++D EHLGIP+TEY+ I MPS
Sbjct: 82 AQNEDILTIKAEDAPDVLNLVFESSESDRLSEYDLKLMDIDQEHLGIPDTEYAAVINMPS 141
Query: 459 SEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXX 280
SEF RIC DL ES+ I +K+GVKFS GDIG+ V L +++DK
Sbjct: 142 SEFKRICVDLMALSESVSIEASKDGVKFSCAGDIGNGAVTLRSHSNVDKPDLNVDIELTE 201
Query: 279 XVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEED 106
V+LTF+ +YL F KA LS V+L +S +VPL+VEY++ ++R+YLAPKI +++
Sbjct: 202 PVSLTFSLKYLVNFCKAAGLSKSVKLCLSNEVPLLVEYQLAGSSYLRFYLAPKIGDDE 259
>UniRef50_O02115 Cluster: Proliferating cell nuclear antigen; n=6;
Eukaryota|Rep: Proliferating cell nuclear antigen -
Caenorhabditis elegans
Length = 229
Score = 163 bits (397), Expect = 2e-39
Identities = 74/181 (40%), Positives = 119/181 (65%), Gaps = 1/181 (0%)
Frame = -2
Query: 642 CAGDKDTVTXKAQDN-ADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRM 466
CA + DT K ++N D++ F F P ++K D +K+M++D EHLGIP+ +Y+ M
Sbjct: 47 CANNDDTCMLKYEENEGDSIIFTFADPKRDKTQDVTVKMMDIDSEHLGIPDQDYAVVCEM 106
Query: 465 PSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXX 286
P+ EF + C+DLS F +S+ I+ TK G+ F+ GDIGS+ V + +++ D
Sbjct: 107 PAGEFQKTCKDLSTFSDSLNITATKAGIVFTGKGDIGSSVVTYSPSSNTDDETEAVTLEV 166
Query: 285 XXXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEED 106
V + F+ +Y+N FTKAT+LS +V+LS+ DVP+VVEY I + G++R+YLAPKI++++
Sbjct: 167 KDPVNVNFSIKYMNQFTKATALSDRVRLSLCNDVPVVVEYPIEENGYLRFYLAPKIDDDE 226
Query: 105 S 103
+
Sbjct: 227 N 227
>UniRef50_A0BN24 Cluster: Proliferating cell nuclear antigen; n=4;
Paramecium tetraurelia|Rep: Proliferating cell nuclear
antigen - Paramecium tetraurelia
Length = 259
Score = 157 bits (380), Expect = 3e-37
Identities = 76/180 (42%), Positives = 115/180 (63%), Gaps = 1/180 (0%)
Frame = -2
Query: 642 CAGDKDTVTXKAQDNADN-VTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRM 466
C+G+ D +T + Q+ ++F FES N ++S++++ LM+LD E LG+P+T+YS I+M
Sbjct: 81 CSGNDDQITLRTQEEEPTTLSFTFESKN--RISEFQLNLMSLDQEQLGVPDTDYSSVIKM 138
Query: 465 PSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXX 286
PS+EF +ICR+L E++ I +K+G+KF GDIG V + +K
Sbjct: 139 PSNEFTKICRELGNINEAIGIETSKDGIKFYVKGDIGEGQVSVKSNDG-EKKEERVECDV 197
Query: 285 XXXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEED 106
V L+FA +Y N F KA +LSPQV LSMS D PLV+EY+I +G ++ YLAPKI +++
Sbjct: 198 DEPVNLSFAVRYFNLFNKAAALSPQVILSMSQDQPLVIEYQIEQMGSLKLYLAPKINDDE 257
>UniRef50_Q8GZE5 Cluster: Proliferating cell nuclear antigen; n=16;
Dinophyceae|Rep: Proliferating cell nuclear antigen -
Pyrocystis lunula (Dinoflagellate)
Length = 259
Score = 152 bits (368), Expect = 8e-36
Identities = 74/177 (41%), Positives = 113/177 (63%), Gaps = 2/177 (1%)
Frame = -2
Query: 636 GDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSS 457
G D++ + + +AD V+F ES +++++D+E+KLM ++ EH+ IPE Y + ++PSS
Sbjct: 84 GTSDSLKLRWRGDADMVSFQCESGEEDRIADFELKLMQIESEHMEIPEQHYKVSAKLPSS 143
Query: 456 EFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXX 277
EF +ICRDL +FGE+M + +KEG+ FS GD+G+ NV L + +K
Sbjct: 144 EFQKICRDLKEFGETMQVKASKEGITFSVQGDMGAGNVML-KPREAEKPEDKVTLSVHEP 202
Query: 276 VTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRI--PDIGHIRYYLAPKIEE 112
VT TFA +YL F KA LS V+L + D PL+V+Y + D GH+++YLAPKI+E
Sbjct: 203 VTATFALRYLVNFAKAAPLSGTVELGLGPDAPLLVKYDLDKADNGHLQFYLAPKIDE 259
>UniRef50_P11038 Cluster: Probable DNA polymerase sliding clamp;
n=4; Nucleopolyhedrovirus|Rep: Probable DNA polymerase
sliding clamp - Autographa californica nuclear
polyhedrosis virus (AcMNPV)
Length = 256
Score = 151 bits (367), Expect = 1e-35
Identities = 74/179 (41%), Positives = 113/179 (63%)
Frame = -2
Query: 642 CAGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMP 463
C ++ +V KA+D D + FVF + N ++ Y +KLM +D+EHLGIP+++Y C + M
Sbjct: 81 CVNERSSVLMKAEDQGDVMAFVFNNDN--RICTYTLKLMCIDVEHLGIPDSDYDCVVHMS 138
Query: 462 SSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXX 283
S EFA++C+D++QF +++SC+K+G++F A GDIGSA+V++ S D
Sbjct: 139 SVEFAQVCKDMTQFDHDIIVSCSKKGLQFRANGDIGSADVQM----SADN-ENFSVLKAK 193
Query: 282 XXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEED 106
VT TFA YL +F KA L+P V + MS ++P +EY I D+G + +LAPKI D
Sbjct: 194 QTVTHTFAGDYLCHFAKAAPLAPTVTIYMSEELPFKLEYCIKDVGVLACFLAPKIVNND 252
>UniRef50_Q5CW01 Cluster: Proliferating cell nuclear antigen PCNA;
n=2; Cryptosporidium|Rep: Proliferating cell nuclear
antigen PCNA - Cryptosporidium parvum Iowa II
Length = 262
Score = 146 bits (354), Expect = 4e-34
Identities = 73/181 (40%), Positives = 113/181 (62%), Gaps = 2/181 (1%)
Frame = -2
Query: 642 CAGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMP 463
C+ D D V + D+++++ F+FE+PN ++VS++E+ L+++D + L IPET +S + MP
Sbjct: 82 CSND-DQVLLRHDDDSESLIFIFETPNGDRVSEFELTLISIDQDSLQIPETSFSSVVTMP 140
Query: 462 SSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXX 283
S+EF R+CRD++QF +S+ I T + V+FS G +GS ++ L D
Sbjct: 141 SNEFQRLCRDMAQFSDSLSIDVTSKNVRFSTKGSLGSGSIILRPKEGAD--SEAVALDVS 198
Query: 282 XXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRI--PDIGHIRYYLAPKIEEE 109
L F+ +YLN F KAT LS V+LSMS + PL +EY + GH+R+YLA KI E+
Sbjct: 199 EPCQLVFSLRYLNNFAKATPLSNSVKLSMSENQPLELEYPLEGSGSGHLRFYLARKITED 258
Query: 108 D 106
D
Sbjct: 259 D 259
>UniRef50_Q5K7Y2 Cluster: Proliferating cell nuclear antigen; n=1;
Filobasidiella neoformans|Rep: Proliferating cell
nuclear antigen - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 343
Score = 140 bits (340), Expect = 2e-32
Identities = 62/110 (56%), Positives = 82/110 (74%)
Frame = -2
Query: 642 CAGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMP 463
CA D D VT KA D+AD + +FESP +++V +YEMKLM++D EHLGIP+T+Y T+ M
Sbjct: 81 CAKDTDVVTLKASDDADALNLIFESPKEDRVGEYEMKLMDIDQEHLGIPDTQYDATVSMS 140
Query: 462 SSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDK 313
S+EFARICRDL+ GES+ I C+KEGV FSA G++G +V L Q A D+
Sbjct: 141 SAEFARICRDLAVLGESVKIECSKEGVTFSADGEVGKGSVLLRQNAGQDR 190
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = -2
Query: 273 TLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEE 109
+LTF+ +YL F K+ L+ +V L MS DVPL+V++ + G ++++LAPKI +E
Sbjct: 290 SLTFSLKYLTNFAKSAPLAREVTLHMSNDVPLLVQFEF-EQGTLQFFLAPKIADE 343
>UniRef50_P15873 Cluster: Proliferating cell nuclear antigen; n=11;
Saccharomycetales|Rep: Proliferating cell nuclear
antigen - Saccharomyces cerevisiae (Baker's yeast)
Length = 258
Score = 128 bits (310), Expect = 9e-29
Identities = 62/179 (34%), Positives = 107/179 (59%)
Frame = -2
Query: 642 CAGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMP 463
C + DT+T A + D++ +FE ++++++Y +KLM++D + L I E +Y T+ +P
Sbjct: 81 CGNNTDTLTLIADNTPDSIILLFEDTKKDRIAEYSLKLMDIDADFLKIEELQYDSTLSLP 140
Query: 462 SSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXX 283
SSEF++I RDLSQ +S+ I TKE +KF A GDIGS +V + ++
Sbjct: 141 SSEFSKIVRDLSQLSDSINIMITKETIKFVADGDIGSGSVIIKPFVDMEHPETSIKLEMD 200
Query: 282 XXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEED 106
V LTF +YL K +SLS +V + +S++ P + ++ + G ++++LAPK +E+
Sbjct: 201 QPVDLTFGAKYLLDIIKGSSLSDRVGIRLSSEAPALFQFDLKS-GFLQFFLAPKFNDEE 258
>UniRef50_A2DQV2 Cluster: Proliferating cell nuclear antigen,
putative; n=1; Trichomonas vaginalis G3|Rep:
Proliferating cell nuclear antigen, putative -
Trichomonas vaginalis G3
Length = 263
Score = 126 bits (305), Expect = 3e-28
Identities = 62/180 (34%), Positives = 103/180 (57%), Gaps = 1/180 (0%)
Frame = -2
Query: 642 CAGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMP 463
C + D +T + ++ + F FE+ + ++ +++M LM++ EHL IP+ E TI +
Sbjct: 81 CGDNNDVLTLETNEDQSCLKFKFENSSSDRYFEFQMNLMDISSEHLSIPDAEPEATITLG 140
Query: 462 SSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXX 283
SEF +ICRDL+QFG+++ I+ K V F+ G + + + S K
Sbjct: 141 CSEFQKICRDLAQFGDTVKITVEKSRVSFAVAGTNTNCCLNYSNFESAGKDGSQVTIQCE 200
Query: 282 XXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPD-IGHIRYYLAPKIEEED 106
+ L+FA +YLN FTKA LS V+L +S D P +V++ + D G I+YYLAPK+++ +
Sbjct: 201 DKIELSFALRYLNLFTKAAPLSENVKLCLSNDRPFLVQFDLEDEAGDIKYYLAPKVDDNE 260
>UniRef50_Q8X1W1 Cluster: Proliferating cell nuclear antigen; n=1;
Coprinopsis cinerea|Rep: Proliferating cell nuclear
antigen - Coprinus cinereus (Inky cap fungus)
(Hormographiella aspergillata)
Length = 368
Score = 120 bits (288), Expect = 4e-26
Identities = 55/105 (52%), Positives = 74/105 (70%)
Frame = -2
Query: 642 CAGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMP 463
CA D D T KA D AD + ++E+ N +++++YEMKLM +D + L IP+TEY + MP
Sbjct: 81 CAKDDDICTLKAADEADVLNLIYEAKNSDRIAEYEMKLMEIDADALTIPDTEYEARVTMP 140
Query: 462 SSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQT 328
SSEFARI RDLSQ GES+ I +KEGV+F+A G+ + NV L QT
Sbjct: 141 SSEFARIVRDLSQLGESVRIEVSKEGVRFAAEGESANGNVLLRQT 185
Score = 62.9 bits (146), Expect = 6e-09
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = -2
Query: 273 TLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEE 109
+LTF+ +YL F K+TSLS +VQL MS DVPL+V Y G+IRYYLAPKI ++
Sbjct: 315 SLTFSLKYLVNFAKSTSLSAKVQLMMSNDVPLLVSYDFGQ-GYIRYYLAPKIGDD 368
>UniRef50_Q98SC0 Cluster: Proliferating cell nuclear antigen; n=1;
Guillardia theta|Rep: Proliferating cell nuclear antigen
- Guillardia theta (Cryptomonas phi)
Length = 258
Score = 118 bits (285), Expect = 9e-26
Identities = 56/177 (31%), Positives = 103/177 (58%), Gaps = 1/177 (0%)
Frame = -2
Query: 642 CAGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMP 463
CA ++D+V ++N + +TF+F + E+ S+++++L+ ++ E LGIPET YS + +
Sbjct: 81 CATNEDSVEIIYKNNENFITFLFRNEANERSSEFQLRLLEINNETLGIPETIYSAVVTLT 140
Query: 462 SSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKL-AQTASIDKXXXXXXXXX 286
+ E+ R+C ++ G+++ +S ++ +KF G++G ++ L + +
Sbjct: 141 AVEYKRVCSEMLTIGDTVYLSISENTIKFEIEGEVGKGSISLKSHILEENSVEDNNKTSD 200
Query: 285 XXXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIE 115
+ + FA +YLN F KA LS +V L MS DVPL +E+ +RYYLAPK++
Sbjct: 201 MEIIKMGFALRYLNTFAKAVPLSDKVTLKMSKDVPLQLEFNFGIKSLLRYYLAPKVD 257
>UniRef50_Q4P3B0 Cluster: Proliferating cell nuclear antigen; n=1;
Ustilago maydis|Rep: Proliferating cell nuclear antigen
- Ustilago maydis (Smut fungus)
Length = 289
Score = 118 bits (283), Expect = 2e-25
Identities = 51/103 (49%), Positives = 71/103 (68%)
Frame = -2
Query: 639 AGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPS 460
A + D + K D+ D + FESP ++V ++EMKLM++D EHLGIP+T+Y ++M S
Sbjct: 82 ANNDDVLALKKSDDGDTLQMTFESPKSDRVGEFEMKLMDIDSEHLGIPDTQYDAVVKMSS 141
Query: 459 SEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQ 331
EF RICRDL+ GES+ I +KEGV FSA G+IG+A + L Q
Sbjct: 142 GEFGRICRDLANIGESVKIEVSKEGVSFSAEGEIGAARMTLKQ 184
Score = 60.1 bits (139), Expect = 4e-08
Identities = 27/55 (49%), Positives = 41/55 (74%)
Frame = -2
Query: 270 LTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEED 106
LTF+ +YL+ F KA L+ +VQL MS +VPL+ E+ + G++R+YLAPK+ E+D
Sbjct: 235 LTFSLKYLSNFAKAAPLADEVQLHMSNEVPLLCEFSFEN-GYVRFYLAPKLSEDD 288
>UniRef50_P61074 Cluster: Proliferating cell nuclear antigen; n=8;
Aconoidasida|Rep: Proliferating cell nuclear antigen -
Plasmodium falciparum (isolate 3D7)
Length = 274
Score = 107 bits (256), Expect = 3e-22
Identities = 56/187 (29%), Positives = 103/187 (55%), Gaps = 11/187 (5%)
Frame = -2
Query: 636 GDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETE--YSCTIRMP 463
G ++V ++D+ DN+ FVFE+ ++KV+++ +KLM+++L+ L IP+ E + + +
Sbjct: 83 GANESVVISSKDDEDNLNFVFENNKEDKVTNFSLKLMSIELDSLNIPDCEEGFDAEVELS 142
Query: 462 SSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXX 283
S E I R+LS+F +++ I +KF+ G +G A V L S +
Sbjct: 143 SKELTNIFRNLSEFSDTVFIEIDSNCIKFTTKGIVGDAEVALKPRDSTSEDDIGVTIKSK 202
Query: 282 XXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPD---------IGHIRYYL 130
+ +FA +YLN F+K+ L+ V L +S P+ +Y I D IG ++++L
Sbjct: 203 KKIKQSFAIKYLNLFSKSNILADVVVLGLSDSRPIEFKYEIKDTSPDSDTLKIGFVKFFL 262
Query: 129 APKIEEE 109
APK++++
Sbjct: 263 APKMDDD 269
>UniRef50_Q9NGR7 Cluster: Proliferating cell nuclear antigen 1; n=1;
Toxoplasma gondii|Rep: Proliferating cell nuclear
antigen 1 - Toxoplasma gondii
Length = 316
Score = 100 bits (239), Expect(2) = 6e-22
Identities = 54/158 (34%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
Frame = -2
Query: 627 DTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP--ETEYSCTIRMPSSE 454
D+ + + ++++D VTFVFE+ EK+S + ++LM +D + L +P ET + T+ M + E
Sbjct: 86 DSCSIQNEEDSDTVTFVFENEADEKLSSFSLRLMAIDQDALRVPEDETAHDVTVTMSARE 145
Query: 453 FARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXV 274
FA + R + +F +S+ + K GVKF GD+G V L + V
Sbjct: 146 FANVVRIMGEFSDSVRVEVDKLGVKFVTQGDLGVGEVLLKPKPFANGDDSGVEIKVNSPV 205
Query: 273 TLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRI 160
T+A +YLNYF KA S+S V LS++ P+ V + I
Sbjct: 206 CQTYAVKYLNYFAKAASVSSSVTLSLTDQNPIEVRFDI 243
Score = 26.6 bits (56), Expect(2) = 6e-22
Identities = 7/15 (46%), Positives = 15/15 (100%)
Frame = -2
Query: 153 IGHIRYYLAPKIEEE 109
IGH++++LAPK++++
Sbjct: 280 IGHVKFFLAPKMDDD 294
>UniRef50_Q5CJE0 Cluster: Proliferating cell nuclear antigen; n=2;
Cryptosporidium|Rep: Proliferating cell nuclear antigen
- Cryptosporidium hominis
Length = 261
Score = 105 bits (253), Expect = 7e-22
Identities = 64/180 (35%), Positives = 100/180 (55%), Gaps = 8/180 (4%)
Frame = -2
Query: 633 DKDT--VTXKAQDNADN-VTFVFESPNQEKVSDYE--MKLMNLDLEHLGIPETEYSCTIR 469
DKDT K DN DN +T FE N +S E ++LM+++ EH+ IPE EY C +
Sbjct: 83 DKDTSMTLKKYDDNEDNRITMCFED-NSGILSSKECILRLMDIEQEHISIPEEEYECNVT 141
Query: 468 MPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXX 289
MPS+ F I RD+S G+ + + + + +KF GD G ++ S D
Sbjct: 142 MPSNLFQSIVRDMSGIGDEVSLEISGKYIKFCVDGDDGKIDLNFPLNDSPD-ITKAVQIH 200
Query: 288 XXXXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPD---IGHIRYYLAPKI 118
++ +A +YL+YFTKA+ LS V +S+S VPL +++ + D G++++YLAPK+
Sbjct: 201 ADDTISQKYALRYLSYFTKASPLSTTVNISISKGVPLRLQFPLNDKYEHGNMQFYLAPKL 260
>UniRef50_A5Z0S2 Cluster: Proliferating cell nuclear antigen 2; n=1;
Phaseolus coccineus|Rep: Proliferating cell nuclear
antigen 2 - Phaseolus coccineus (Scarlet runner bean)
Length = 271
Score = 100 bits (239), Expect = 3e-20
Identities = 65/188 (34%), Positives = 104/188 (55%), Gaps = 16/188 (8%)
Frame = -2
Query: 639 AGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPE-----TEYSCT 475
A D +T KA D D VTF FESP Q ++S++EM+L+++D I E EY
Sbjct: 81 ANGDDIITIKADDGGDTVTFTFESPRQNQISNFEMRLVDIDSPRYWIREDEAKYMEYLAM 140
Query: 474 IRMPSSEFARICRDLSQ----FGESMVISCTKEGVKFSATG--DIGSANVKLAQTASIDK 313
++MPSS F ICR++S+ F +VI+ T++ VKFS G ++GSA+V + A++
Sbjct: 141 VKMPSSIFDGICRNISRIDGMFDLDLVITVTQKYVKFSTQGNENLGSASVLNPEEATV-- 198
Query: 312 XXXXXXXXXXXXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYR-----IPDIG 148
+ + Y++ F KAT+LS V + + + +V EY+ IP+IG
Sbjct: 199 -IDMFDVNKPVSMRIRNGGTYMSSFMKATTLSNTVSIILLNKLAVVFEYKIAEMEIPEIG 257
Query: 147 HIRYYLAP 124
++R+Y+ P
Sbjct: 258 YLRFYIPP 265
>UniRef50_Q4A3A5 Cluster: Putative proliferating cell nuclear
antigen; n=1; Emiliania huxleyi virus 86|Rep: Putative
proliferating cell nuclear antigen - Emiliania huxleyi
virus 86
Length = 259
Score = 96.3 bits (229), Expect = 6e-19
Identities = 55/182 (30%), Positives = 98/182 (53%), Gaps = 5/182 (2%)
Frame = -2
Query: 642 CAGDKDTVTXKAQDNADNVTFV-FESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRM 466
C+G DT T + N +V + FE+P ++++D+E+ L++++ + + +PE E I+M
Sbjct: 80 CSGPDDTFTLRF--NGGSVLLIMFETPAHDRITDFELNLLDIEQDAMSVPELEPHLHIQM 137
Query: 465 PSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKL----AQTASIDKXXXXX 298
S + RI +D FG+ + IS TK+GV +S GD G N+ + +T +
Sbjct: 138 NSIDLKRIVKDYQTFGDVITISGTKDGVTYSVNGDFGKGNILIKPVDPETLPANDPLRNN 197
Query: 297 XXXXXXXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKI 118
V F+ +Y + F K T+ S V L + D+P+ + Y + G +++YLAPKI
Sbjct: 198 KMDITEPVVQKFSLKYFSNFMKNTA-SDIVVLDLVNDMPMCLTYPLGVRGSVKFYLAPKI 256
Query: 117 EE 112
++
Sbjct: 257 DD 258
>UniRef50_A2F7D4 Cluster: Proliferating cell nuclear antigen,
putative; n=1; Trichomonas vaginalis G3|Rep:
Proliferating cell nuclear antigen, putative -
Trichomonas vaginalis G3
Length = 264
Score = 93.9 bits (223), Expect = 3e-18
Identities = 46/179 (25%), Positives = 95/179 (53%)
Frame = -2
Query: 639 AGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPS 460
A D + + +++T + +++K + + +K ++++ + + IPE Y + + S
Sbjct: 82 ASTDDYLKISTEKPNEDITIQLSTQSEDKNTRFNLKPVDINGDAVSIPEHIYKAKLSLSS 141
Query: 459 SEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXX 280
+ F ++ R LS+ +S+ + CT+ + FS + + +A + +K
Sbjct: 142 NAFNQLIRSLSEVNDSVAVRCTEGSISFSVSDILLNATTTFNAGVTNEKAEEEIEVDVTE 201
Query: 279 XVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEEDS 103
+ +A +YL + A++LS +V LS S PL+VEY + + G++R+YLAPK++EE S
Sbjct: 202 GCKVAYALRYLKAISAASALSTRVNLSFSPHFPLLVEYSLQEGGYVRFYLAPKVDEEAS 260
>UniRef50_Q4QF35 Cluster: Proliferating cell nuclear antigen; n=6;
Trypanosomatidae|Rep: Proliferating cell nuclear antigen
- Leishmania major
Length = 293
Score = 93.5 bits (222), Expect = 4e-18
Identities = 39/105 (37%), Positives = 70/105 (66%)
Frame = -2
Query: 627 DTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFA 448
D+++ + D++D VT E+P + + +Y++KL+ ++ E +GIPE +Y T+ + S+EFA
Sbjct: 86 DSLSLRHDDDSDVVTLTSENPEKTRKCEYQLKLLEIEAESMGIPEMDYRSTVTLNSAEFA 145
Query: 447 RICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDK 313
+I RD+ FG+++ I+ +KEGVKFS++GD+G L D+
Sbjct: 146 KIVRDMQVFGDTVTIAISKEGVKFSSSGDVGQGYTFLQAAGVSDR 190
Score = 60.9 bits (141), Expect = 3e-08
Identities = 24/56 (42%), Positives = 41/56 (73%)
Frame = -2
Query: 273 TLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEED 106
TL+FA +++ F K ++LS +V L + D P +VEY I ++G++RYYLAPK+++ +
Sbjct: 238 TLSFALRFMGIFAKGSTLSERVTLKFAKDSPCMVEYGIDNVGYLRYYLAPKVDDAE 293
>UniRef50_A7AVH8 Cluster: Proliferating cell nuclear antigen 1; n=1;
Babesia bovis|Rep: Proliferating cell nuclear antigen 1
- Babesia bovis
Length = 277
Score = 90.6 bits (215), Expect = 3e-17
Identities = 49/186 (26%), Positives = 98/186 (52%), Gaps = 14/186 (7%)
Frame = -2
Query: 627 DTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPE-TE-YSCTIRMPSSE 454
D+V ++++ D ++F+FE+ ++V + +KLM+++ + L IPE TE Y I + S E
Sbjct: 86 DSVLIQSEEEKDYISFIFENNVDDRVMSFSLKLMSIEQDALSIPENTEGYDAEITLGSKE 145
Query: 453 FARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXV 274
A IC+ +++F +++ + + V F+ GD+G + L ++ +
Sbjct: 146 LANICKQMNEFSDTLKLDVSINSVSFATQGDLGFGEIVLKNRPPTNESDCGVSVKVRRPI 205
Query: 273 TLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPD------------IGHIRYYL 130
++A +YL F K+ LS V L + + P+ V+Y + D +G +++YL
Sbjct: 206 KQSYATKYLLMFAKSCCLSDVVTLGLCQNRPIEVKYDVKDAIGDADSPHAHILGELKFYL 265
Query: 129 APKIEE 112
APK+++
Sbjct: 266 APKVDD 271
>UniRef50_O10308 Cluster: Probable DNA polymerase sliding clamp;
n=4; Nucleopolyhedrovirus|Rep: Probable DNA polymerase
sliding clamp - Orgyia pseudotsugata multicapsid
polyhedrosis virus (OpMNPV)
Length = 249
Score = 82.6 bits (195), Expect = 7e-15
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 1/169 (0%)
Frame = -2
Query: 621 VTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARI 442
+T + D V +E+ + + ++LD + LG+P+ EY+C + +PS+E R
Sbjct: 87 LTMRVAARDDRVRLAYETAR--RAVSCTLAQISLDADRLGVPDKEYTCVLAVPSAELTRA 144
Query: 441 CRDLSQFGESMV-ISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXVTLT 265
C DL++ G + V +S G+ F+A D G V++ S + +T
Sbjct: 145 CADLARLGATTVEMSSGTTGLSFAAHADDG-VRVRVLLRGSPQR-----------PLTQA 192
Query: 264 FACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKI 118
FAC YLN +A++LS V + M A +PL + +R+ +G + YLAP++
Sbjct: 193 FACCYLNKLARASALSETVDVCMDASMPLRLRFRLGPLGALDLYLAPRV 241
>UniRef50_UPI000049949B Cluster: proliferating cell nuclear antigen;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: proliferating
cell nuclear antigen - Entamoeba histolytica HM-1:IMSS
Length = 262
Score = 82.2 bits (194), Expect = 1e-14
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
Frame = -2
Query: 594 DNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFG- 418
D+ S K + + L++++ E + IPE + I + S+EF +I +D S G
Sbjct: 98 DDAVLSITSEGTNKTMKFGLNLVDIEAESVEIPELQSDAIITLSSAEFLKITKDFSALGD 157
Query: 417 ESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXVTLTFACQYLNYF 238
+S+ I CTK V + G + + L+ ++D VT +FA + ++ F
Sbjct: 158 DSITIGCTKNEVTLTTKGAMCETCMTLSALENVD--SNGLQIEHNKDVTASFALKQISEF 215
Query: 237 TKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEED 106
K+ L+ V+LS+S PL++E++ + +++YLAPK +EED
Sbjct: 216 AKSAPLADNVKLSLSGQAPLIMEFK-GEACVLKFYLAPKFDEED 258
>UniRef50_Q8WSN0 Cluster: Proliferating cell nuclear antigen 2; n=7;
Plasmodium|Rep: Proliferating cell nuclear antigen 2 -
Plasmodium falciparum
Length = 264
Score = 79.4 bits (187), Expect = 7e-14
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 13/185 (7%)
Frame = -2
Query: 633 DKDTVTXKAQDNADNVTF---VFESPNQEKVSD---YEMKLMNLDLEHLGIPETEYSCTI 472
+K TV +DN ++ + + Q D ++KL+N EHL IP++EY C
Sbjct: 83 EKSTVFLFKEDNENDAVLNIGIIDEEEQSSADDSLEIQVKLINAQKEHLEIPQSEYHCQC 142
Query: 471 RMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXX 292
M S +F + L+ G+++ IS K+ + S TG +++K+ T
Sbjct: 143 TMKSKKFQEFTKYLNSIGDNVSISMKKDAMILSTTG----SDIKV--TKQFTNDMTDISI 196
Query: 291 XXXXXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYR-------IPDIGHIRYY 133
V+ FA +YL F++A+SLS +V +S+S +P+ +++ + D H+ ++
Sbjct: 197 TCTKSVSQEFATRYLVMFSRASSLSDEVLISLSPHIPISIKFNFKQQLTDLQDPSHLTFF 256
Query: 132 LAPKI 118
LAPKI
Sbjct: 257 LAPKI 261
>UniRef50_A7AUH5 Cluster: Proliferating cell nuclear antigen; n=3;
Piroplasmida|Rep: Proliferating cell nuclear antigen -
Babesia bovis
Length = 264
Score = 79.0 bits (186), Expect = 9e-14
Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 13/180 (7%)
Frame = -2
Query: 612 KAQDNADNVTFV--FESPNQEKVS----DYEMKLMNLDLEHLGIPETEYSCTIRMPSSEF 451
+ D+ D V FV E+ ++ + ++K+++++ EHL IP+ EY+C M S F
Sbjct: 91 RGDDSEDPVLFVRIIEAGGYDEAESDALEAQVKMIDVEREHLDIPDCEYTCKCVMNSRRF 150
Query: 450 ARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXVT 271
+ L G+++VIS K+ +K A GD +K ++T ++
Sbjct: 151 QEFAKYLHSIGDTVVISMNKDVIKLEAEGD----GIKASKT--FHDGVGDVRVMSTEPLS 204
Query: 270 LTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDI-------GHIRYYLAPKIEE 112
FA +YL F+KAT+L+ V +++SA +PL V++ D I +YLAP IE+
Sbjct: 205 QMFATRYLVLFSKATALAQDVSINLSAGIPLSVKFNFADSLAMNDGDSFINFYLAPNIED 264
>UniRef50_A7K9E0 Cluster: Putative uncharacterized protein Z530L;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein Z530L - Chlorella virus ATCV-1
Length = 261
Score = 75.4 bits (177), Expect = 1e-12
Identities = 45/148 (30%), Positives = 82/148 (55%)
Frame = -2
Query: 546 DYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSAT 367
+++M L++LD E + IP ++ I SS F + ++LS FG ++ I E V S++
Sbjct: 120 NFKMGLIDLDSEEMLIPHMDFEVEIDADSSVFQKHVKNLSMFGGALRIQADDE-VWMSSS 178
Query: 366 GDIGSANVKLAQTASIDKXXXXXXXXXXXXVTLTFACQYLNYFTKATSLSPQVQLSMSAD 187
GDIG+ + +L + + TF+ +Y+N F KA ++S V L +S +
Sbjct: 179 GDIGTGSFRLEGSR----------VKVSGPLDSTFSLKYINTFCKAANVSKTVALRLSPE 228
Query: 186 VPLVVEYRIPDIGHIRYYLAPKIEEEDS 103
PL+++Y + +I ++LAP+ EE+D+
Sbjct: 229 QPLLLKYEFAEDSYISFFLAPRYEEDDN 256
>UniRef50_A7KA48 Cluster: Putative uncharacterized protein Z788R;
n=3; Chlorovirus|Rep: Putative uncharacterized protein
Z788R - Chlorella virus ATCV-1
Length = 292
Score = 74.5 bits (175), Expect = 2e-12
Identities = 45/177 (25%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Frame = -2
Query: 636 GDKDTVTXK-AQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPS 460
G +D++ + + N + ++ + + + +KL+ +D + I + E+ I +PS
Sbjct: 118 GSRDSIMFRYLKSNPHVLEITIQNFEKNSTTQFFLKLIEIDSACIDINDLEFDAIISIPS 177
Query: 459 SEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASI-DKXXXXXXXXXX 283
+ F R+CRD+S+ + I K+G + S D S +Q + D
Sbjct: 178 NYFQRLCRDMSELTNFLWIE-KKDG-QVSFCSDYTSVTDFASQRTILGDSDMGKIITVEE 235
Query: 282 XXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEE 112
+ F+ +YL F+KA+ LS V++ + +PLV++Y I IG +++ +AP +EE
Sbjct: 236 ASYSNKFSLKYLTSFSKASGLSSVVEMFIKTSLPLVLKYSIGSIGSLKFVIAPSMEE 292
>UniRef50_Q3LWE0 Cluster: Proliferating cell nuclear antigen; n=1;
Bigelowiella natans|Rep: Proliferating cell nuclear
antigen - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 258
Score = 73.7 bits (173), Expect = 3e-12
Identities = 45/173 (26%), Positives = 84/173 (48%)
Frame = -2
Query: 633 DKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSE 454
++D+V K + + + VFE+ + ++++YE+ L E + +P +Y TI M S E
Sbjct: 84 NEDSVMMKYDETTNFFSLVFENKDS-RIAEYELNLFKSIKEKITVPVDKYDATISMNSLE 142
Query: 453 FARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXV 274
++ +DL G+ +VI+ V F+A G G A + T ++ K +
Sbjct: 143 LTKLAKDLINVGDIVVINIHPGVVVFTAKGTSGRAIIIYKNTNNLTK--RKVTVNCQNQI 200
Query: 273 TLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIE 115
T + + +Y+ +F+K LS V L P+ + I+Y+LAPK++
Sbjct: 201 TQSISLKYIIHFSKLALLSENVTLEFKTSYPMKLAVNFDGNSKIQYFLAPKLK 253
>UniRef50_Q84513 Cluster: Probable DNA polymerase sliding clamp 1;
n=3; Chlorovirus|Rep: Probable DNA polymerase sliding
clamp 1 - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 262
Score = 72.1 bits (169), Expect = 1e-11
Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 2/174 (1%)
Frame = -2
Query: 639 AGDKDTVTXKAQDNADN-VTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMP 463
AG D++ + N + + ++ + ++ + MKL+ +D + + + E+ I MP
Sbjct: 88 AGSHDSILFRYLKNDPHMIELTIQNFEKNSLTKFNMKLIEIDSVEIEVGDIEFDTIIVMP 147
Query: 462 SSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASI-DKXXXXXXXXX 286
++ F RICRD+S + +VI K+G + S D +Q I D
Sbjct: 148 ANYFQRICRDMSDITDHLVI--VKKGDEVSFNSDYTCVTDFASQKTIIGDSDNGQITCNN 205
Query: 285 XXXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAP 124
F+ +YL F KA+ +S V++ + PL+++Y + +G +++ +AP
Sbjct: 206 DTDYESKFSLKYLTSFCKASGMSSAVEIYLKESYPLILKYTVGSMGALKFVIAP 259
>UniRef50_A7IV77 Cluster: Putative uncharacterized protein M697L;
n=2; Paramecium bursaria Chlorella virus A1|Rep:
Putative uncharacterized protein M697L - Chlorella virus
MT325
Length = 276
Score = 65.7 bits (153), Expect = 9e-10
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 1/169 (0%)
Frame = -2
Query: 609 AQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDL 430
++D DN+ + S Q ++ + ++LD E + P+ EY I SS + ++L
Sbjct: 121 SEDTPDNL--IVRSDTQ----NFMLNTIDLDSEEMEAPDAEYDVEIDADSSVIQKYFKNL 174
Query: 429 SQFGESMVISCTKEGVKFSATGDIGSANVKLA-QTASIDKXXXXXXXXXXXXVTLTFACQ 253
+ FG+S+ ++ V +GD+G + K+A Q I+ + F+ +
Sbjct: 175 ALFGDSVSVTSEGNDVFLGTSGDLGKVSFKVAGQRVKIN-----------GTLNAKFSSR 223
Query: 252 YLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEED 106
YL F KA SLS QL + + P+++ Y I ++LAPKI ++D
Sbjct: 224 YLVTFAKAASLSKTSQLRFANEQPVLIRYEFGPDSFISFFLAPKILDDD 272
>UniRef50_O41056 Cluster: Probable DNA polymerase sliding clamp 2;
n=3; Chlorovirus|Rep: Probable DNA polymerase sliding
clamp 2 - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 264
Score = 60.5 bits (140), Expect = 3e-08
Identities = 39/166 (23%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Frame = -2
Query: 588 VTFVFESPNQ----EKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQF 421
++F +++P++ + SD++MK ++++ E + IPE + I S+ + ++++ F
Sbjct: 103 ISFTYDNPDELIVKSEYSDFKMKTIDIETEEMEIPEMDIDVLIDADSNIIQKYLKNMAGF 162
Query: 420 GESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXVTLTFACQYLNY 241
G+++ I + V G+IG ++++ K +T FA +YL
Sbjct: 163 GDTVKIYTQDDVVHMKTAGEIGEVDLQIHDQRVEIK----------GRLTCEFATRYLMT 212
Query: 240 FTKATSLSPQVQLSMSADVPLVVEY--RIPDIGHIRYYLAPKIEEE 109
F KA +S +V + + D P + EY I ++LAPK++++
Sbjct: 213 FAKAAGISKRVVIKLLDDQPGIFEYVFDAESDSKISFFLAPKVKDD 258
>UniRef50_Q8QNE7 Cluster: EsV-1-132; n=2; Phaeovirus|Rep: EsV-1-132
- Ectocarpus siliculosus virus 1
Length = 301
Score = 59.7 bits (138), Expect = 6e-08
Identities = 36/138 (26%), Positives = 72/138 (52%)
Frame = -2
Query: 537 MKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDI 358
+KL++LD E + IP+ E+ + MPSSE ++ R++ + I T+ ++ + G++
Sbjct: 165 IKLLDLDAEDIIIPQVEFDRVVSMPSSELSKHVREMVTVSPFISIRATRTTLELVSEGEM 224
Query: 357 GSANVKLAQTASIDKXXXXXXXXXXXXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPL 178
+++ + TAS + + +Y+ FTK SL+ V+L + + PL
Sbjct: 225 AKSHITIEPTAS---GLNWKHSEKGGDIEGKYFARYIEKFTK-NSLANNVELFLKTNYPL 280
Query: 177 VVEYRIPDIGHIRYYLAP 124
++ + I IG +R+ +AP
Sbjct: 281 IMRFEI-SIGCLRFCIAP 297
>UniRef50_A0RXH7 Cluster: DNA polymerase sliding clamp subunit; n=2;
Thermoprotei|Rep: DNA polymerase sliding clamp subunit -
Cenarchaeum symbiosum
Length = 248
Score = 59.7 bits (138), Expect = 6e-08
Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 6/178 (3%)
Frame = -2
Query: 633 DKDTVTXKAQDNADNVTFVFESPNQEKVS-----DYEMKLMNLDLEHLGIPETEYSCTIR 469
D+ T K D D++T + + Y+++L+ +P+ Y I
Sbjct: 74 DEFTKLIKRADKKDSITISVSKDSMLLIDIGSNKKYKIRLIESSATDTPLPKISYDAKIE 133
Query: 468 MPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXX 289
+ ++ F +I D+ + + I GV+F+ GD G A + + + +
Sbjct: 134 LATTSFEKILGDVQVVSDYLTIKAKPTGVEFAGKGDSGEAAIDVKKDDDSMEALKVKKES 193
Query: 288 XXXXVTLTFACQYLNYFTKATS-LSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKI 118
T++ +YLN +A + V S PL VE+++ +IG I +YLAP++
Sbjct: 194 EG-----TYSLEYLNPIVRAVGGAAGSVTCEFSDAKPLRVEFKVANIGRIHFYLAPRV 246
>UniRef50_Q9NGR6 Cluster: Proliferating cell nuclear antigen 2; n=1;
Toxoplasma gondii|Rep: Proliferating cell nuclear
antigen 2 - Toxoplasma gondii
Length = 272
Score = 57.2 bits (132), Expect = 3e-07
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Frame = -2
Query: 603 DNADNVTFV-FESPNQEKVSDYEMKLMNLDLEHLGIPE-TEYSCTIRMPSSEFARICRDL 430
D D + + E P E++L++++ E L +PE TE+ T + S E + R L
Sbjct: 85 DEEDTILHINIEDPESGDTWSMEVRLLDVESEQLEVPEHTEHEATAVVRSKELQDLVRYL 144
Query: 429 SQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXVTLTFACQY 250
+ ES+V+ K ++ SA GD +A+ K+ Q S+ FA +Y
Sbjct: 145 NSLSESIVVKMDKTHMQLSARGDSVAASRKM-QPESL---------VCTNSTEHEFAARY 194
Query: 249 LNYFTKATSLSPQVQLSMSADVPLVVEYRI 160
LN F K L+ V++ S +P+ + +R+
Sbjct: 195 LNMFLKGAVLADFVEIGCSHGLPMQISFRL 224
>UniRef50_Q8SRV9 Cluster: Proliferating cell nuclear antigen; n=1;
Encephalitozoon cuniculi|Rep: Proliferating cell nuclear
antigen - Encephalitozoon cuniculi
Length = 267
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/148 (20%), Positives = 68/148 (45%)
Frame = -2
Query: 552 VSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFS 373
V +++KL D E IPE ++ + +P+ EF + + + FG+ + + + + F
Sbjct: 123 VLSFKLKLFTSDSEAYNIPEFDFDASATIPADEFMYVPKLVGTFGDVVGVQAEGKTLMFF 182
Query: 372 ATGDIGSANVKLAQTASIDKXXXXXXXXXXXXVTLTFACQYLNYFTKATSLSPQVQLSMS 193
TG+ A++ + + ++ +T A +Y+N K L +V++ +
Sbjct: 183 QTGEHADASMSFEECPAREE----LKIEANTLITQEIAMKYVNLIGKVVPLCKEVKIFLG 238
Query: 192 ADVPLVVEYRIPDIGHIRYYLAPKIEEE 109
P+ + + H++ Y+APK E +
Sbjct: 239 TKKPVFFNLCMDGVSHMKLYVAPKFEND 266
>UniRef50_Q8ZTY0 Cluster: DNA polymerase sliding clamp A; n=4;
Pyrobaculum|Rep: DNA polymerase sliding clamp A -
Pyrobaculum aerophilum
Length = 249
Score = 50.8 bits (116), Expect = 3e-05
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = -2
Query: 513 EHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLA 334
E L P+ Y+ ++ S A +D + + ++E + SA+ D G VKL
Sbjct: 121 EELPTPKVVYTAMVKAASDVLATAVKDADAVADEVKFEASEEALIISASSDKGEVEVKLD 180
Query: 333 QTASIDKXXXXXXXXXXXXVTLTFACQYLNYFTKATS-LSPQVQLSMSADVPLVVEYRIP 157
+ + + + F+ +YL T TS +S V + ++ P+ + + IP
Sbjct: 181 KNSEL-----VYEFDVKEPASARFSLEYLVDITSKTSKISDIVTIELATAKPIYLSFDIP 235
Query: 156 DIGHIRYYLAPKIE 115
G I Y++AP++E
Sbjct: 236 AGGKISYFIAPRVE 249
>UniRef50_UPI00015BB110 Cluster: proliferating cell nuclear antigen
PcnA; n=1; Ignicoccus hospitalis KIN4/I|Rep:
proliferating cell nuclear antigen PcnA - Ignicoccus
hospitalis KIN4/I
Length = 245
Score = 50.4 bits (115), Expect = 4e-05
Identities = 33/175 (18%), Positives = 82/175 (46%)
Frame = -2
Query: 639 AGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPS 460
A +D ++ + +N+ ++ +FE K + ++++ +L + + E + + S
Sbjct: 81 ATKEDKLSIEVGENSYSI--IFEGHGLRKFTLPQLEVYEEELPEVDL---ELPARVEITS 135
Query: 459 SEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXX 280
+ + +DL +++ + ++ AT D+G A V +++ + +
Sbjct: 136 DSYRELVKDLEPIADTVTFNLEPGTLRVEATSDLGYAEVIISEDSGV-----LLDYQVPE 190
Query: 279 XVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIE 115
V ++ +YL Y + + ++ +V L + D+PL + I + G + Y LAP++E
Sbjct: 191 SVKSSYGLEYLTYVSSVSQVADKVALEIGNDMPLRATFEIGEGGKLVYLLAPRVE 245
>UniRef50_Q97Z84 Cluster: DNA polymerase sliding clamp C; n=3;
Sulfolobaceae|Rep: DNA polymerase sliding clamp C -
Sulfolobus solfataricus
Length = 245
Score = 50.4 bits (115), Expect = 4e-05
Identities = 35/162 (21%), Positives = 70/162 (43%)
Frame = -2
Query: 600 NADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQF 421
N +T F+ E +E+ L+ ++ E+ ++ + FA I +LS
Sbjct: 93 NESKLTLTFDG---EFTRSFELPLIQVESTQPPSVNLEFPFKAQLLTITFADIIDELSDL 149
Query: 420 GESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXVTLTFACQYLNY 241
GE + I + + F GD+ +A V+L S D + + +Y+
Sbjct: 150 GEVLNIHSKENKLYFEVIGDLSTAKVEL----STDNGTLLEASGADVSSS--YGMEYVAN 203
Query: 240 FTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIE 115
TK S ++L + +PL + +++P G+ +Y+AP+ +
Sbjct: 204 TTKMRRASDSMELYFGSQIPLKLRFKLPQEGYGDFYIAPRAD 245
>UniRef50_Q6LWJ8 Cluster: DNA polymerase sliding clamp; n=8;
cellular organisms|Rep: DNA polymerase sliding clamp -
Methanococcus maripaludis
Length = 250
Score = 47.2 bits (107), Expect = 3e-04
Identities = 31/164 (18%), Positives = 68/164 (41%)
Frame = -2
Query: 606 QDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLS 427
+ N N+TF + ++ Y++ NL +P+ EY ++ + + F +D
Sbjct: 93 EKNKLNITFKSNVTRKFSIALYDVSSSNLK-----VPDIEYPNSVSIKAGAFVEALKDAE 147
Query: 426 QFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXVTLTFACQYL 247
+ + + + + GD+ + + D + TF YL
Sbjct: 148 LVNDHITLKIDENKFVIYSKGDLNQSETVFDNSIDDDDNALADFNMGEASRS-TFNLAYL 206
Query: 246 NYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIE 115
TK+T+ +++ + +D+P+ +EY + + + LAP+IE
Sbjct: 207 KDLTKSTAAEDLLKIYLGSDMPVKIEYEVSG-SKLVFLLAPRIE 249
>UniRef50_Q9YEZ5 Cluster: DNA polymerase sliding clamp B2; n=1;
Aeropyrum pernix|Rep: DNA polymerase sliding clamp B2 -
Aeropyrum pernix
Length = 249
Score = 46.8 bits (106), Expect = 4e-04
Identities = 27/133 (20%), Positives = 57/133 (42%)
Frame = -2
Query: 513 EHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLA 334
E L P+ ++ RM S F RDL E++ + ++ + + ++ + ++L+
Sbjct: 122 EKLPEPKVSFTVRARMLGSTFREAVRDLEPHSETLTLRALEDALLLVGSSEMATVEIELS 181
Query: 333 QTASIDKXXXXXXXXXXXXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPD 154
Q+ +++ +Y + A + V +S S D P+ V+
Sbjct: 182 QSRG-----SLLDYEAESQDRASYSIEYFSEMLSAAQAADAVVVSFSEDAPVRVDMEYLG 236
Query: 153 IGHIRYYLAPKIE 115
G + +Y++PKIE
Sbjct: 237 GGRLTFYVSPKIE 249
>UniRef50_A3DM84 Cluster: DNA polymerase sliding clamp; n=1;
Staphylothermus marinus F1|Rep: DNA polymerase sliding
clamp - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 248
Score = 46.4 bits (105), Expect = 6e-04
Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = -2
Query: 501 IPETEYSCTIR--MPSSEFARICRDLSQFGESMVISCTKEGVKF--SATGDIGSANVKLA 334
+PE + T++ M S F + ++L +++ K+ K A+GDI A ++L
Sbjct: 121 LPELKIPFTVKAKMLPSTFRDVVKELEPISDAIEFRAIKDEQKIIAKASGDIVEAEIEL- 179
Query: 333 QTASIDKXXXXXXXXXXXXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPD 154
SI+ + + YL+ + A+ + ++ + VP +EY +P
Sbjct: 180 ---SIENGALIDFEASEDARAI-YTIDYLSDISGASQAAEELTFEFATAVPCKIEYTLPQ 235
Query: 153 IGHIRYYLAPKIE 115
G + +Y+AP++E
Sbjct: 236 EGRLTFYVAPRVE 248
>UniRef50_A2BN98 Cluster: DNA polymerase sliding clamp B2; n=1;
Hyperthermus butylicus DSM 5456|Rep: DNA polymerase
sliding clamp B2 - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 246
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/162 (15%), Positives = 71/162 (43%)
Frame = -2
Query: 600 NADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQF 421
+ + V+F F K + + L+++ E L P+ E+ +++ S + +D+
Sbjct: 93 DGNTVSFAFIGKGYRK---FTLPLLDITAEELPEPQLEFKAIVKVMSDVYRDAIKDVELI 149
Query: 420 GESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXVTLTFACQYLNY 241
G+ + +++ K ++ DIG A + + + ++ +Y +
Sbjct: 150 GDVIRFIASQDEFKVVSSSDIGEAEIIYTRESG-----SIIEMEVEDTQQASYTLEYFSD 204
Query: 240 FTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIE 115
+ A ++ + + S+D+P ++E+ + + +AP+++
Sbjct: 205 LSGAARVADTITIKFSSDMPALIEHELQQGAKFSFLIAPRVD 246
>UniRef50_Q7T6Y0 Cluster: Probable DNA polymerase sliding clamp;
n=1; Acanthamoeba polyphaga mimivirus|Rep: Probable DNA
polymerase sliding clamp - Mimivirus
Length = 464
Score = 45.2 bits (102), Expect = 0.001
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 2/151 (1%)
Frame = -2
Query: 570 SPNQEKVSDYEMKLMNLDL--EHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISC 397
S N + + E++L +D+ + +P+TE+ I M S +F IC+ LSQ + I+
Sbjct: 315 SENNDNSEEREIELFLMDIINPEIPVPKTEFQNRITMKSDKFHLICKHLSQNSTFVEITS 374
Query: 396 TKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXVTLTFACQYLNYFTKATSLS 217
+ F + G + T K + + L F+K L
Sbjct: 375 INNEILFKGQSEGGKVTMTYKDTGYKKKEKPDQVIQG------VYELRNLLGFSKCNKLC 428
Query: 216 PQVQLSMSADVPLVVEYRIPDIGHIRYYLAP 124
+++ + D PLV+ + +G + +L+P
Sbjct: 429 NTIEIYLKNDFPLVLVISVATLGKMYVFLSP 459
>UniRef50_Q550G9 Cluster: Proliferating cell nuclear antigen family
protein; n=2; Dictyostelium discoideum|Rep:
Proliferating cell nuclear antigen family protein -
Dictyostelium discoideum AX4
Length = 164
Score = 44.4 bits (100), Expect = 0.002
Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Frame = -2
Query: 594 DNVTFVFESPNQEKVSDYEMKLMNLDL-EHLGIPET-EYSCTIRMPSSEFARICRDLSQF 421
++V F+ + +S++++ + +D+ E I E EY C + MPS+ + IC +L +
Sbjct: 5 EDVMFIRVIKSNGTISNFKVPEVCVDIKEKYEISENDEYQCEVLMPSNLLSDICNELKSY 64
Query: 420 GE-SMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXVTLTFACQY-- 250
+ ++ I K + F I +A++ L +K ++ F +Y
Sbjct: 65 KDLNLKIQVNKNNLLFKIDDSIINADIVLE-----NKKTKEFYLICKKNFSIEFKNKYFL 119
Query: 249 -LNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIE 115
+N K ++ + L M+ PL++ + I + ++YLAP +E
Sbjct: 120 KINNIVKKINIK-ECFLQMNEKYPLIIIFSICSVSSFQFYLAPILE 164
>UniRef50_O29912 Cluster: DNA polymerase sliding clamp; n=1;
Archaeoglobus fulgidus|Rep: DNA polymerase sliding clamp
- Archaeoglobus fulgidus
Length = 245
Score = 43.6 bits (98), Expect = 0.004
Identities = 30/132 (22%), Positives = 52/132 (39%), Gaps = 1/132 (0%)
Frame = -2
Query: 501 IPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTAS 322
IPE E I M + EF + + + ++ KEG + A GD+ S + +T
Sbjct: 122 IPELELPAKIVMDAGEFKKAIAAADKISDQVIFRSDKEGFRIEAKGDVDSIVFHMTETEL 181
Query: 321 IDKXXXXXXXXXXXXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYR-IPDIGH 145
I+ F+ YL F K + + + + P+ + + +
Sbjct: 182 IE--------FNGGEARSMFSVDYLKEFCKVAGSGDLLTIHLGTNYPVRLVFELVGGRAK 233
Query: 144 IRYYLAPKIEEE 109
+ Y LAP+IE E
Sbjct: 234 VEYILAPRIESE 245
>UniRef50_A2BIU0 Cluster: DNA polymerase sliding clamp subunit; n=1;
Hyperthermus butylicus DSM 5456|Rep: DNA polymerase
sliding clamp subunit - Hyperthermus butylicus (strain
DSM 5456 / JCM 9403)
Length = 248
Score = 43.2 bits (97), Expect = 0.005
Identities = 28/140 (20%), Positives = 59/140 (42%), Gaps = 2/140 (1%)
Frame = -2
Query: 534 KLMNLDLEHLGIPETE--YSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGD 361
+L+NLD+ +PE E + + + F +D G+++ + + T
Sbjct: 112 RLLNLDVPVPELPEAELEFKVHVSLIVDPFKNALKDAEAVGDTVELEAPDD-----TTLI 166
Query: 360 IGSANVKLAQTASIDKXXXXXXXXXXXXVTLTFACQYLNYFTKATSLSPQVQLSMSADVP 181
I +A+T ++ +YL + T ++ + + + D+P
Sbjct: 167 IRGVGAAVAETKIRSDTPAVVEFNVEEPSKSAYSIEYLKHMLSLTKVADTITIEFAQDMP 226
Query: 180 LVVEYRIPDIGHIRYYLAPK 121
L +++R+P G++ Y LAPK
Sbjct: 227 LRLQFRLPAGGNVTYLLAPK 246
>UniRef50_P38252 Cluster: Putative uncharacterized protein YBR089W;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YBR089W - Saccharomyces
cerevisiae (Baker's yeast)
Length = 199
Score = 42.7 bits (96), Expect = 0.007
Identities = 26/56 (46%), Positives = 33/56 (58%)
Frame = +2
Query: 341 LTFAEPMSPVAENFTPSFVHEITIDSPNCERSRQILANSELGMRIVQLYSVSGIPK 508
+T +P+SP A NF S V I I+S N ++SR IL NSE G V+ Y S I K
Sbjct: 15 MTEPDPISPSATNFIVSLVIMILIESLNWDKSRTILENSEDGNDRVESYCNSSIFK 70
>UniRef50_Q8TWK3 Cluster: DNA polymerase sliding clamp; n=1;
Methanopyrus kandleri|Rep: DNA polymerase sliding clamp
- Methanopyrus kandleri
Length = 253
Score = 40.3 bits (90), Expect = 0.039
Identities = 36/175 (20%), Positives = 72/175 (41%), Gaps = 3/175 (1%)
Frame = -2
Query: 627 DTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHL-GIPETEYSCTIRMPSSEF 451
D +T + +D + V S E+ E +L ++D++ + PE +++ + +
Sbjct: 89 DEITLEGEDE-EEVIIKLGSSGYER----EFRLRSIDIDDIPDEPELDFAVEVTVVPDFI 143
Query: 450 ARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXVT 271
RD +++ + F A G+ G K+ + A V
Sbjct: 144 QDAVRDADLVSDTVKVGAKGNTFYFKAEGERGRVIPKVQEGAE-----ALLTFEVEEDVE 198
Query: 270 LTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGH--IRYYLAPKIEE 112
+ YL +A + V++ + D+PL + +RI G + +YLAP++EE
Sbjct: 199 TAYPLDYLKDMIQAAQGAESVRIRLGQDMPLELTFRIGPAGEGKLTFYLAPRVEE 253
>UniRef50_O73947 Cluster: DNA polymerase sliding clamp; n=7;
Thermococcaceae|Rep: DNA polymerase sliding clamp -
Pyrococcus furiosus
Length = 249
Score = 39.5 bits (88), Expect = 0.067
Identities = 35/174 (20%), Positives = 69/174 (39%), Gaps = 1/174 (0%)
Frame = -2
Query: 630 KDT-VTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSE 454
KDT + K ++N +T + +V +++ M +DL PE ++ + +
Sbjct: 86 KDTLILKKGEENFLEITIQGTATRTFRVPLIDVEEMEVDL-----PELPFTAKVVVLGEV 140
Query: 453 FARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXV 274
+D S +S+ + A G+ +KL D+
Sbjct: 141 LKDAVKDASLVSDSIKFIARENEFIMKAEGETQEVEIKLTLE---DEGLLDIEVQEETKS 197
Query: 273 TLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEE 112
+ YL+ K + +V + ++P+ +EY I D G + + LAP++EE
Sbjct: 198 A--YGVSYLSDMVKGLGKADEVTIKFGNEMPMQMEYYIRDEGRLTFLLAPRVEE 249
>UniRef50_Q74MV1 Cluster: DNA polymerase sliding clamp; n=2;
Nanoarchaeum equitans|Rep: DNA polymerase sliding clamp
- Nanoarchaeum equitans
Length = 249
Score = 39.1 bits (87), Expect = 0.089
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 1/128 (0%)
Frame = -2
Query: 501 IPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEG-VKFSATGDIGSANVKLAQTA 325
IP EY+ + + S I D S +S+ + A G++ V+L +
Sbjct: 125 IPSLEYNNVVELDSKAIKEIIDDASAIADSLKFKAEPPSKLIIKAEGEMKEMTVELTEGE 184
Query: 324 SIDKXXXXXXXXXXXXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGH 145
+++ YL F KA +S L + D PL +EYR D
Sbjct: 185 D-----AVVSIDIQEEAYASYSIDYLKKFAKAADVSDIAILKLKTDYPLWLEYRYLDKMT 239
Query: 144 IRYYLAPK 121
+ + LAP+
Sbjct: 240 LIFILAPR 247
>UniRef50_A1RXU8 Cluster: DNA polymerase sliding clamp; n=1;
Thermofilum pendens Hrk 5|Rep: DNA polymerase sliding
clamp - Thermofilum pendens (strain Hrk 5)
Length = 247
Score = 37.5 bits (83), Expect = 0.27
Identities = 30/145 (20%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Frame = -2
Query: 543 YEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATG 364
++ L+++ + L P+ ++ +M S F +D S ES+ + E + A
Sbjct: 109 FKFPLIDIAGQELPSPKLNFTVAAKMLSDTFRDALKDASLVSESVKLKAEDESLWLLARS 168
Query: 363 DIGSANVKLA-QTASIDKXXXXXXXXXXXXVTLTFACQYLNYF-TKATSLSPQVQLSMSA 190
D G + + +T S+ + ++ +L+ +KA +S + L +
Sbjct: 169 DKGEIESRFSIETGSLVEIDVKEAAEA------SYGIDFLDKIVSKAYRISDILGLRFAT 222
Query: 189 DVPLVVEYRIPDIGHIRYYLAPKIE 115
++PL + + I G ++Y LAP++E
Sbjct: 223 NMPLEMTFDIAGGGTLKYLLAPRME 247
>UniRef50_Q975M2 Cluster: DNA polymerase sliding clamp B; n=3;
Sulfolobaceae|Rep: DNA polymerase sliding clamp B -
Sulfolobus tokodaii
Length = 248
Score = 37.5 bits (83), Expect = 0.27
Identities = 33/144 (22%), Positives = 57/144 (39%)
Frame = -2
Query: 549 SDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSA 370
S+ +K ++ L P+ S T I RDLS GE + IS + V S
Sbjct: 111 SNIYIKGEKTSIDQLTEPKVNLSVTFTTDGDVLKDIARDLSLVGEEVEISADENTVTLS- 169
Query: 369 TGDIGSANVKLAQTASIDKXXXXXXXXXXXXVTLTFACQYLNYFTKATSLSPQVQLSMSA 190
T + G L + DK ++ + L K TS+S V +
Sbjct: 170 TEEAGRTYKSLLKQ---DKPLKSLNVESPSKAV--YSIEVLKDVFKVTSISQNVTVGFGN 224
Query: 189 DVPLVVEYRIPDIGHIRYYLAPKI 118
++P+ +E G + +++AP++
Sbjct: 225 NIPMKIEVPTDSGGQLIFWIAPRL 248
>UniRef50_A2BMA5 Cluster: DNA polymerase sliding clamp subunit; n=1;
Hyperthermus butylicus DSM 5456|Rep: DNA polymerase
sliding clamp subunit - Hyperthermus butylicus (strain
DSM 5456 / JCM 9403)
Length = 253
Score = 37.1 bits (82), Expect = 0.36
Identities = 29/170 (17%), Positives = 64/170 (37%)
Frame = -2
Query: 627 DTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFA 448
D V K + + F V + + L +E L P+ E + T +M + +F
Sbjct: 88 DIVELKLDEEHRRLEVNFIDKKTNVVRSFYVSLREGTVEELAEPQVELTVTAKMMADDFK 147
Query: 447 RICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXVTL 268
+ D + + + ++ ++ A SA K + +
Sbjct: 148 NVINDAKIVSDEVEFAAYEDRIEVYAE----SAQKKYMGVLKVGMPLITLNVEGGTPIRA 203
Query: 267 TFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKI 118
++ L KAT+ + V L +P+ + + +P G + Y+++P++
Sbjct: 204 KYSIDLLKAAVKATTAANTVTLEYGEALPMRLSFDLPGGGLLIYWISPRV 253
>UniRef50_Q973F5 Cluster: DNA polymerase sliding clamp C; n=2;
Sulfolobus|Rep: DNA polymerase sliding clamp C -
Sulfolobus tokodaii
Length = 246
Score = 36.7 bits (81), Expect = 0.48
Identities = 21/102 (20%), Positives = 44/102 (43%)
Frame = -2
Query: 420 GESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXXXXVTLTFACQYLNY 241
G+S+ + SA D+GS+ ++L+ + +Y+
Sbjct: 151 GDSITFKAEGGKLYLSANSDMGSSTIELSTENG------GLLESEGGDAESVYGLEYVVN 204
Query: 240 FTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIE 115
+K S V+++ + +PL + Y +P G+ +Y+AP+ E
Sbjct: 205 TSKMRKPSDTVEIAFGSQIPLKLRYNLPQGGYADFYIAPRAE 246
>UniRef50_Q9Y9V7 Cluster: DNA polymerase sliding clamp B1; n=1;
Aeropyrum pernix|Rep: DNA polymerase sliding clamp B1 -
Aeropyrum pernix
Length = 251
Score = 34.7 bits (76), Expect = 1.9
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -2
Query: 264 FACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKI 118
++ Q L TK + V++S ++D P+ +EY P+ + Y+AP +
Sbjct: 201 YSRQVLEIATKPVGAAESVKVSFASDYPMKIEYTFPNGERMELYMAPSL 249
>UniRef50_Q5JH70 Cluster: Oligosaccharyl transferase, STT3 subunit;
n=1; Thermococcus kodakarensis KOD1|Rep: Oligosaccharyl
transferase, STT3 subunit - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 1000
Score = 33.5 bits (73), Expect = 4.4
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = -2
Query: 591 NVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSE 454
N T +FE+ N ++ D ++ + NL+++HL ET T+++P +E
Sbjct: 804 NGTLIFEAYNGTELVDRQVLVKNLNIDHLN--ETPVEVTVKIPQAE 847
>UniRef50_P38947 Cluster: Succinate-semialdehyde dehydrogenase
[NAD(P)+]; n=4; Bacteria|Rep: Succinate-semialdehyde
dehydrogenase [NAD(P)+] - Clostridium kluyveri
Length = 472
Score = 33.1 bits (72), Expect = 5.9
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -2
Query: 591 NVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFAR 445
N V P +KVS + ++LMN +L+ LG PE + PS E A+
Sbjct: 130 NTIIVAPHPKAKKVSAHTVELMNAELKKLGAPENIIQ-IVEAPSREAAK 177
>UniRef50_A7JF77 Cluster: Putative uncharacterized protein; n=9;
Francisella tularensis|Rep: Putative uncharacterized
protein - Francisella tularensis subsp. novicida
GA99-3549
Length = 279
Score = 32.7 bits (71), Expect = 7.7
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 642 CAGDKDTVTXKAQDNADNVTFV-FESPNQEKVSDYEMKLMNLDLEHLGIP 496
C D + K ++ N+T + F + NQEK+S + L+NLD+E +P
Sbjct: 75 CGAGSDLLVVKKYNDKANLTGIDFGNWNQEKLSKNNINLINLDIEKDKLP 124
>UniRef50_A3DP96 Cluster: DNA polymerase sliding clamp; n=1;
Staphylothermus marinus F1|Rep: DNA polymerase sliding
clamp - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 245
Score = 32.7 bits (71), Expect = 7.7
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -2
Query: 264 FACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAP 124
+ +YL + T ++ + S+D+PL +E+ + + G ++Y LAP
Sbjct: 197 YQLEYLKHIVNLTKIAELAIIRFSSDMPLELEFSLSE-GRVKYLLAP 242
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,417,279
Number of Sequences: 1657284
Number of extensions: 8508806
Number of successful extensions: 22995
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 22446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22953
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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