Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_L22
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   6.5  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   8.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 268 QSDGLFHFNDDCLFLFVNRSGL 333
           +S+G+F    +C   +V RSGL
Sbjct: 561 RSEGIFSDPKNCAAYYVCRSGL 582


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 261 ACQYLNYFTKATSLSP 214
           A Q +N F KAT +SP
Sbjct: 366 AQQEINMFLKATEMSP 381


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 630 KDTVTXKAQDNADNVTFVFESPNQ 559
           K + T K Q   DN+      PNQ
Sbjct: 113 KTSETSKLQQLVDNIEHKLSDPNQ 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,235
Number of Sequences: 336
Number of extensions: 2108
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)