Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_L22
         (643 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1136 + 34369994-34370312,34370398-34370550,34370648-343707...   228   2e-60
11_02_0124 + 8568012-8568392,8568532-8568798,8568963-8569364           30   1.4  
11_02_0131 + 8651175-8651313,8651567-8651743,8651761-8651879,865...    30   1.8  
04_01_0489 + 6436641-6437966                                           28   7.2  
03_06_0194 + 32249846-32250562                                         28   7.2  
02_05_0391 + 28563242-28563302,28563714-28563931,28564563-285646...    27   9.6  

>02_05_1136 +
           34369994-34370312,34370398-34370550,34370648-34370745,
           34371563-34371784
          Length = 263

 Score =  228 bits (558), Expect = 2e-60
 Identities = 101/179 (56%), Positives = 141/179 (78%)
 Frame = -2

Query: 642 CAGDKDTVTXKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMP 463
           CAG+ D +T KA D +D VTF+FESPNQ+K++D+EMKLM++D EHLGIP++EY   +RMP
Sbjct: 81  CAGNDDIITIKADDGSDTVTFMFESPNQDKIADFEMKLMDIDSEHLGIPDSEYQAIVRMP 140

Query: 462 SSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASIDKXXXXXXXXXX 283
           SSEF+RIC+DLS  G++++IS TKEGVKFS  GDIG+AN+   Q  ++DK          
Sbjct: 141 SSEFSRICKDLSSIGDTVIISVTKEGVKFSTAGDIGTANIVCRQNKTVDKPEDATIIEMQ 200

Query: 282 XXVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYRIPDIGHIRYYLAPKIEEED 106
             V+LTFA +Y+N FTKA+ LS QV +S+S+++P+VVEY+I ++G+IR+YLAPKIEE++
Sbjct: 201 EPVSLTFALRYMNSFTKASPLSEQVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDE 259


>11_02_0124 + 8568012-8568392,8568532-8568798,8568963-8569364
          Length = 349

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -2

Query: 468 MPSSEFARICRDLSQFGESMVISCTKEGVK 379
           +PS++F  I + L QF +S+V  C + G+K
Sbjct: 61  LPSNDFNHIFKSLGQFEQSIVQDCARIGLK 90


>11_02_0131 +
           8651175-8651313,8651567-8651743,8651761-8651879,
           8652179-8652589
          Length = 281

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -2

Query: 468 MPSSEFARICRDLSQFGESMVISCTKEGVK 379
           +PS++F +I R L QF +S +  CT  G++
Sbjct: 10  LPSNDFNQIFRSLEQFKQSTMQHCTHRGLQ 39


>04_01_0489 + 6436641-6437966
          Length = 441

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 420 GESMVISCTKEGVKF-SATGDIGSANVKL 337
           G+ + +SCT EGV F SAT      +VKL
Sbjct: 88  GDQLCVSCTGEGVAFVSATASCALDDVKL 116


>03_06_0194 + 32249846-32250562
          Length = 238

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 19/61 (31%), Positives = 25/61 (40%)
 Frame = -1

Query: 421 WRINGDFMHKRRSKVLGNRRHRLSERQAGPDRFY*QRGRGSRH*NGRARHSDVCLPVPQL 242
           W   G+       + LG+ R R +   A        RGRG R   G  RH+    PVP +
Sbjct: 49  WSEEGERKATVSGRALGDGRRRGASSSASG------RGRGGRRVPGVLRHTPTHAPVPSV 102

Query: 241 F 239
           F
Sbjct: 103 F 103


>02_05_0391 +
           28563242-28563302,28563714-28563931,28564563-28564637,
           28564730-28565264,28565343-28565523,28565586-28565724,
           28565826-28566067,28566157-28566322,28566591-28566698
          Length = 574

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +2

Query: 323 EAVWASLTFAEPMSPVAENFTPSFVHEITIDSPNCERSRQILANSEL 463
           +A+W +L +      +AE  TPS++  I    P C   R    N++L
Sbjct: 501 QAMWMNLEY--DYDEIAEIGTPSWIRAIRYPCPTCGAKRTKSGNNDL 545


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,201,027
Number of Sequences: 37544
Number of extensions: 230381
Number of successful extensions: 575
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)