Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_L21
         (806 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    25   2.7  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          25   3.6  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          25   3.6  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          25   3.6  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          25   3.6  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   4.8  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   4.8  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   4.8  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    24   6.3  

>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 304 SDKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVPTV 194
           +D   R     +G+NLLA  G   +AVMR    +P+V
Sbjct: 179 TDIAMRFLLGREGNNLLAPEGGLHEAVMRGGFLLPSV 215


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 518 PIRDHFDFDKSSEVPPDGSQL 580
           P  ++FD   SSE PP  +QL
Sbjct: 147 PHHEYFDSKSSSETPPSYNQL 167


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 518 PIRDHFDFDKSSEVPPDGSQL 580
           P  ++FD   SSE PP  +QL
Sbjct: 147 PHHEYFDSKSSSETPPSYNQL 167


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 518 PIRDHFDFDKSSEVPPDGSQL 580
           P  ++FD   SSE PP  +QL
Sbjct: 147 PHHEYFDSKSSSETPPSYNQL 167


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 518 PIRDHFDFDKSSEVPPDGSQL 580
           P  ++FD   SSE PP  +QL
Sbjct: 147 PHHEYFDSKSSSETPPSYNQL 167


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +3

Query: 189 IITVGTNARGLITASVLSPYDASRLSPCSLDAHLFS 296
           + TV  N R      V +PY    L P S DA+LFS
Sbjct: 226 VSTVPKNLREPCPGCV-APYGYHNLMPLSTDANLFS 260


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = +1

Query: 427 RKLAPCCRSTRQRR---GGR*MTISHPPCRACSSHTGP 531
           RK+ P  R+ R+R    GGR  +   PP R  S  T P
Sbjct: 248 RKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRP 285


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 201 GTNARGLITASVLSPYDASRLSPCSLDAHLF 293
           G+  RGL+ A V      S  +P SL AH F
Sbjct: 134 GSELRGLVAAQVAGITFISVYAPPSLSAHEF 164


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 381 TISIFSVSWRLRSF 422
           T+S+FSV W L SF
Sbjct: 319 TLSLFSVCWALASF 332


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 885,879
Number of Sequences: 2352
Number of extensions: 20086
Number of successful extensions: 57
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)