Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_L19
(550 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellu... 188 1e-46
UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishma... 166 3e-40
UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1; Ostreoc... 120 2e-26
UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|R... 115 8e-25
UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15; Archa... 95 7e-19
UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiell... 94 2e-18
UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultu... 93 5e-18
UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermo... 93 5e-18
UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole ge... 87 3e-16
UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3; ... 79 5e-14
UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1; ... 74 3e-12
UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n... 58 1e-07
UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3; ... 58 2e-07
UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15; Bacter... 54 3e-06
UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular or... 51 2e-05
UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48; Bacter... 51 2e-05
UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis... 48 1e-04
UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellul... 48 1e-04
UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellu... 48 1e-04
UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellu... 48 2e-04
UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus ... 46 8e-04
UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellu... 46 8e-04
UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33; Bacter... 44 0.002
UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps... 43 0.005
UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putati... 42 0.007
UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whol... 42 0.012
UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; ... 40 0.029
UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29; ... 40 0.038
UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1; Neorick... 40 0.038
UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=... 39 0.066
UniRef50_Q9PQN5 Cluster: 30S ribosomal protein S11; n=1; Ureapla... 38 0.12
UniRef50_UPI0000586F02 Cluster: PREDICTED: hypothetical protein ... 36 0.47
UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=... 36 0.62
UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11; ... 36 0.62
UniRef50_Q7R4R8 Cluster: GLP_440_63181_70326; n=1; Giardia lambl... 36 0.82
UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639... 36 0.82
UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;... 36 0.82
UniRef50_Q7VCT6 Cluster: Predicted protein; n=1; Prochlorococcus... 34 1.9
UniRef50_Q8W9P7 Cluster: Ribosomal protein S11; n=1; Mesostigma ... 33 4.4
UniRef50_Q49081 Cluster: 30S ribosomal protein; n=1; Mycoplasma ... 32 7.6
UniRef50_Q6IIT8 Cluster: HDC17116; n=1; Drosophila melanogaster|... 32 7.6
>UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellular
organisms|Rep: 40S ribosomal protein S14 - Homo sapiens
(Human)
Length = 151
Score = 188 bits (457), Expect = 1e-46
Identities = 89/108 (82%), Positives = 96/108 (88%)
Frame = -3
Query: 488 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 309
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 308 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTP 165
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRATGGN+TKTP
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTP 108
Score = 50.0 bits (114), Expect = 4e-05
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = -1
Query: 178 KQRXPGPGAQXXXXXXXXXSMKIGRIEDVTPVPSDXT 68
+ + PGPGAQ MKIGRIEDVTP+PSD T
Sbjct: 104 RTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140
>UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishmania
major|Rep: 40S ribosomal protein S14 - Leishmania major
Length = 203
Score = 166 bits (403), Expect = 3e-40
Identities = 80/137 (58%), Positives = 97/137 (70%)
Frame = -3
Query: 461 KEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEA 282
K+EV+ GP G+ V+GV HIFASFNDTFVHVTD+SGRET +VTGGMKVKADRDE+
Sbjct: 13 KQEVKA-YGPNVKKGDLVYGVVHIFASFNDTFVHVTDMSGRETYVKVTGGMKVKADRDES 71
Query: 281 SPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPWSWCSVCTSGSCSFKYEDWPH 102
SPYAAM+AAQDV +CK GI ALH+K+RA GG +TK+P + + EDWPH
Sbjct: 72 SPYAAMMAAQDVVARCKECGINALHVKMRAVGGVRTKSPGPGRPGRPPRARPRRDEDWPH 131
Query: 101 *RCHPRTIRXDPEEGWP 51
CHP R P +G+P
Sbjct: 132 RGCHPDPDRLHPPQGFP 148
>UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S14 -
Ostreococcus tauri
Length = 243
Score = 120 bits (290), Expect = 2e-26
Identities = 55/66 (83%), Positives = 62/66 (93%)
Frame = -3
Query: 362 HVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGG 183
HVTDLSG+ET++R TGGMKVKADRDE+SPYAAMLAAQDVA +CK LGITALHIK+RA GG
Sbjct: 90 HVTDLSGKETLSRCTGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKMRAKGG 149
Query: 182 NKTKTP 165
NKTK+P
Sbjct: 150 NKTKSP 155
Score = 48.8 bits (111), Expect = 8e-05
Identities = 25/40 (62%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = -3
Query: 479 RKNKVAKEEVQVT-LGPQHLVGETVFGVAHIFASFNDTFV 363
R V+ V T +GPQ GE VFGVAHIFASFNDTFV
Sbjct: 5 RHRSVSVRRVMATYVGPQAREGELVFGVAHIFASFNDTFV 44
Score = 45.6 bits (103), Expect = 8e-04
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -1
Query: 178 KQRXPGPGAQXXXXXXXXXSMKIGRIEDVTPVPSDXT 68
K + PGPG Q +KIGRIEDVTP P+D T
Sbjct: 151 KTKSPGPGGQSALRALSRSGIKIGRIEDVTPTPTDST 187
>UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|Rep:
Ribosomal protein S14 - Palaemonetes pugio
Length = 77
Score = 115 bits (276), Expect = 8e-25
Identities = 55/70 (78%), Positives = 58/70 (82%)
Frame = -3
Query: 488 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 309
MAPRK K KEEVQV LGPQ GE VF V HI+AS+NDTFVHVTDLSGRETI RVTGG
Sbjct: 1 MAPRKGKTPKEEVQVQLGPQVREGENVFAVCHIYASYNDTFVHVTDLSGRETIIRVTGGQ 60
Query: 308 KVKADRDEAS 279
KVKADRDE+S
Sbjct: 61 KVKADRDESS 70
>UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15;
Archaea|Rep: 30S ribosomal protein S11P - Methanococcus
jannaschii
Length = 129
Score = 95.5 bits (227), Expect = 7e-19
Identities = 43/81 (53%), Positives = 58/81 (71%)
Frame = -3
Query: 407 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKT 228
+G+ HI++S+N+T +H TD++G ETIARV+GG + RDE SPYAAM AA +AE K
Sbjct: 9 WGIVHIYSSYNNTIIHATDITGAETIARVSGGRVTRNQRDEGSPYAAMQAAFKLAEVLKE 68
Query: 227 LGITALHIKLRATGGNKTKTP 165
GI +HIK+RA GG+ K P
Sbjct: 69 RGIENIHIKVRAPGGSGQKNP 89
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = -1
Query: 175 QRXPGPGAQXXXXXXXXXSMKIGRIEDVTPVPSDXT 68
Q+ PGPGAQ ++IGRIEDVTPVP D T
Sbjct: 86 QKNPGPGAQAAIRALARAGLRIGRIEDVTPVPHDGT 121
>UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiella
natans|Rep: Ribosomal protein S14 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 145
Score = 94.3 bits (224), Expect = 2e-18
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = -3
Query: 410 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCK 231
+FG+ HI ++ NDT +HVTD++G ETI+R++ G+ +D+ S Y AMLA Q V+ CK
Sbjct: 11 LFGILHILSTKNDTIIHVTDITGSETISRISSGIVATNGKDKKSNYCAMLATQKVSNVCK 70
Query: 230 TLGITALHIKLRATGGN 180
LGI ALHIK+RA GGN
Sbjct: 71 VLGINALHIKIRARGGN 87
>UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultured
euryarchaeote ARMAN-2|Rep: 30S ribosomal protein S11 -
uncultured euryarchaeote ARMAN-2
Length = 169
Score = 92.7 bits (220), Expect = 5e-18
Identities = 45/81 (55%), Positives = 59/81 (72%)
Frame = -3
Query: 407 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKT 228
+ VAH+++S NDT + +TDLSG ETIA +GGM V AD E SPYAAM AA VA + K
Sbjct: 46 WAVAHVYSSKNDTIITLTDLSGSETIAVGSGGMMVNADSQEGSPYAAMQAAYKVAAEAKE 105
Query: 227 LGITALHIKLRATGGNKTKTP 165
GIT ++I++RA GG+ +KTP
Sbjct: 106 KGITNINIEIRAPGGHGSKTP 126
Score = 38.7 bits (86), Expect = 0.088
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 172 RXPGPGAQXXXXXXXXXSMKIGRIEDVTPVPSDXT 68
+ PG GAQ +++ RIEDVTP+P+D T
Sbjct: 124 KTPGHGAQAVVRVLARSGLRVNRIEDVTPIPTDTT 158
>UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S11P -
Cenarchaeum symbiosum
Length = 198
Score = 92.7 bits (220), Expect = 5e-18
Identities = 40/90 (44%), Positives = 61/90 (67%)
Frame = -3
Query: 434 PQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAA 255
P+ + G+AHI++S+N+T +H+TDL+G ET++ +GG+ V ADR E+SP+AAM AA
Sbjct: 66 PETTPADEKLGIAHIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSPFAAMKAA 125
Query: 254 QDVAEKCKTLGITALHIKLRATGGNKTKTP 165
V E + G T HI++RA GG ++ P
Sbjct: 126 NKVIESARAKGFTGFHIRVRAVGGVGSRVP 155
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -1
Query: 172 RXPGPGAQXXXXXXXXXSMKIGRIEDVTPVPSDXT 68
R PGPGAQ +IGRI+DVTP+P D T
Sbjct: 153 RVPGPGAQAAIRALARGGFRIGRIDDVTPIPHDTT 187
>UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_246, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 182
Score = 87.0 bits (206), Expect = 3e-16
Identities = 42/76 (55%), Positives = 50/76 (65%)
Frame = -3
Query: 338 ETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPWS 159
ET+ R TGGMK K D +E+SP AAM AAQDV+++CK L IT LH+KL A GNKTKTP
Sbjct: 50 ETLVRTTGGMKEKTDGEESSPCAAMPAAQDVSQECKELDITVLHVKLHAARGNKTKTPGP 109
Query: 158 WCSVCTSGSCSFKYED 111
CSF E+
Sbjct: 110 GAQSALQAPCSFWNEN 125
>UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3;
Homo/Pan/Gorilla group|Rep: Similar to ribosomal protein
S14 - Homo sapiens (Human)
Length = 350
Score = 79.4 bits (187), Expect = 5e-14
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = -3
Query: 311 MKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTP 165
MK +AD+DE+SP AML AQDV ++CK LGITALHIKL ATGGN+TKTP
Sbjct: 1 MKEQADQDESSPCTAMLTAQDVVQRCKELGITALHIKLLATGGNRTKTP 49
>UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 104
Score = 73.7 bits (173), Expect = 3e-12
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = -3
Query: 338 ETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNK 177
ET+ R TGGMK KAD +E+SP AAM AAQDV+++ K L IT LH+KL A GGNK
Sbjct: 29 ETLVRSTGGMKEKADGEESSPCAAMPAAQDVSQRFKELDITVLHVKLHAAGGNK 82
>UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBF82A UniRef100 entry -
Rattus norvegicus
Length = 119
Score = 58.4 bits (135), Expect = 1e-07
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Frame = -3
Query: 446 VTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGR-ETIARVTGGMKVKADRDEASPYA 270
++L PQ + G+ V GV +IFASF D+F++ TD+ G+ T VT MK + E +P
Sbjct: 5 LSLRPQVVEGQNVLGVCYIFASFGDSFIYGTDVYGKVNTCQYVTSRMKTQ--YAETNPCH 62
Query: 269 AMLA-AQDVAEKCKTLGITALHIKLRATGGNKTK 171
+ A DV + K + + ALHI+L+ T G K
Sbjct: 63 RLHAGCLDVTHRFKEMSVPALHIRLQDTEGTWLK 96
>UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 332
Score = 57.6 bits (133), Expect = 2e-07
Identities = 36/62 (58%), Positives = 39/62 (62%), Gaps = 9/62 (14%)
Frame = -3
Query: 323 VTGGMKVKADRDEASPYAAMLAAQDVAEKCK------TLGITALH---IKLRATGGNKTK 171
V GGMK+KAD DE+SPYAAML +QDVA CK LG L I L A GGNKT
Sbjct: 211 VGGGMKIKADCDESSPYAAMLVSQDVALCCKYRTNGQILGDCFLEFCLIMLCAAGGNKTN 270
Query: 170 TP 165
TP
Sbjct: 271 TP 272
>UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15;
Bacteria|Rep: 30S ribosomal protein S11 - Silicibacter
pomeroyi
Length = 130
Score = 53.6 bits (123), Expect = 3e-06
Identities = 25/76 (32%), Positives = 44/76 (57%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 225
GVAH+ ++FN+T + ++D+ G G M K R +++PYAA LAA+D K +
Sbjct: 20 GVAHVNSTFNNTKILISDVQGNAISWSSAGTMGFKGSR-KSTPYAAQLAAEDAGRKAQDH 78
Query: 224 GITALHIKLRATGGNK 177
G+ L ++++ G +
Sbjct: 79 GVKTLEVEVQGPGSGR 94
>UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular
organisms|Rep: Ribosomal protein S11 - Chlorokybus
atmophyticus (Soil alga)
Length = 262
Score = 51.2 bits (117), Expect = 2e-05
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 225
GVAHI + N+T + +TDL G +G + K R + S YAA AA+ A+K L
Sbjct: 152 GVAHIQTTLNNTIITITDLDGNTKSWSSSGSIGFKGSRRKTS-YAAQAAAETAAKKSIQL 210
Query: 224 GITALHIKLRATGGNKTKTPWSWCSVCTSGSCSFKYED---WPH*RCHP 87
GI + +K+R G + S + G +K +D PH C P
Sbjct: 211 GIKDVTVKIRGFGPGRDS---SLRGLQIGGLKIYKIQDTTPLPHNGCRP 256
>UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48;
Bacteria|Rep: 30S ribosomal protein S11 - Streptococcus
mutans
Length = 127
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/76 (30%), Positives = 43/76 (56%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 225
G+AHI A+FN+T V +TD+ G G + K R +++P+AA +AA+ A+ +
Sbjct: 17 GIAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSR-KSTPFAAQMAAEAAAKSAQEH 75
Query: 224 GITALHIKLRATGGNK 177
G+ + + ++ G +
Sbjct: 76 GLKTVEVTVKGPGSGR 91
>UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribosomal protein S11 -
Victivallis vadensis ATCC BAA-548
Length = 148
Score = 48.4 bits (110), Expect = 1e-04
Identities = 24/76 (31%), Positives = 43/76 (56%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 225
G+A++ A+FN+T V TDL G I TGG +++ YAA + A D A+K + +
Sbjct: 38 GIAYVLATFNNTKVTFTDLHG-NVICWSTGGKNGFKGSRKSTAYAAQVIAGDAAKKAQLV 96
Query: 224 GITALHIKLRATGGNK 177
G+ + ++++ G +
Sbjct: 97 GMKEVEVRIKGPGAGR 112
>UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellular
organisms|Rep: 30S ribosomal protein S11 - Shewanella
oneidensis
Length = 130
Score = 48.0 bits (109), Expect = 1e-04
Identities = 24/73 (32%), Positives = 40/73 (54%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 225
G+AHI ASFN+T V +TD G +GG + R +++P+AA +AA+ +
Sbjct: 20 GMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSR-KSTPFAAQVAAERAGAAAQDY 78
Query: 224 GITALHIKLRATG 186
G+ L + ++ G
Sbjct: 79 GLKNLEVFVKGPG 91
>UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellular
organisms|Rep: 30S ribosomal protein S11 - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 134
Score = 48.0 bits (109), Expect = 1e-04
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 225
G+AH+ ASFN+T + +TD G +GG K R +++P+AA +A++
Sbjct: 24 GIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSR-KSTPFAAQVASEVAGRAAIEQ 82
Query: 224 GITALHIKLRATG 186
GI L ++++ G
Sbjct: 83 GIKNLDVEIKGPG 95
>UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellular
organisms|Rep: 30S ribosomal protein S11 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/76 (31%), Positives = 42/76 (55%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 225
G+AHI ASFN+T V ++D SG + +G + + R + +P+AA AA A +
Sbjct: 32 GLAHIQASFNNTIVTISDPSGNVVSWKSSGSLGFRGSR-KGTPFAAQQAAMTAANMARDH 90
Query: 224 GITALHIKLRATGGNK 177
G+ +L +++ G +
Sbjct: 91 GMRSLDVRVAGPGSGR 106
>UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus
oeni ATCC BAA-1163|Rep: Ribosomal protein S11 -
Oenococcus oeni ATCC BAA-1163
Length = 113
Score = 45.6 bits (103), Expect = 8e-04
Identities = 28/92 (30%), Positives = 45/92 (48%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 225
GVAHI ++FN+T V +TD +G G + K R +++P+AA LA + A+
Sbjct: 22 GVAHIHSTFNNTIVLITDEAGNAVSWSSAGSLGFKGSR-KSTPFAAQLAGEAAAKAAMEQ 80
Query: 224 GITALHIKLRATGGNKTKTPWSWCSVCTSGSC 129
+ ++ I + K P W +C S C
Sbjct: 81 NMHSVAISV--------KGPGIWTRICNSCCC 104
>UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellular
organisms|Rep: 30S ribosomal protein S11 - Bacillus
subtilis
Length = 131
Score = 45.6 bits (103), Expect = 8e-04
Identities = 22/76 (28%), Positives = 41/76 (53%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 225
G+AHI ++FN+T V +TD G G + + R +++P+AA +AA+ A+
Sbjct: 21 GIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSR-KSTPFAAQMAAETAAKGSIEH 79
Query: 224 GITALHIKLRATGGNK 177
G+ L + ++ G +
Sbjct: 80 GLKTLEVTVKGPGSGR 95
>UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33;
Bacteria|Rep: 30S ribosomal protein S11 - Mycoplasma
pulmonis
Length = 136
Score = 44.4 bits (100), Expect = 0.002
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 225
GVAHI ++ N+T V +D G +G + K + + + YAA LAAQ+ +EK K
Sbjct: 21 GVAHIHSTHNNTIVTFSDEKGNVISWASSGTIGYKGTKKKTA-YAAGLAAQNASEKAKEH 79
Query: 224 GITALHIKLRATG 186
GI + ++++ G
Sbjct: 80 GIREVSVRVKGIG 92
>UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps11
- Ostreococcus tauri
Length = 121
Score = 42.7 bits (96), Expect = 0.005
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = -3
Query: 392 IFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITA 213
I + N+TFV++TDL G +G + K + ++S YAA + V + C I
Sbjct: 15 ISTTLNNTFVNLTDLEGNTLCCVSSGSLGFKGSK-KSSSYAAQSTTEKVLQFCAQQSIEK 73
Query: 212 LHIKLRATG 186
L IKLR G
Sbjct: 74 LMIKLRGVG 82
>UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putative;
n=19; Spermatophyta|Rep: Small subunit ribosomal
protein, putative - Oryza sativa subsp. japonica (Rice)
Length = 366
Score = 42.3 bits (95), Expect = 0.007
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = -3
Query: 395 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 216
H+ N TFV VTD+ G + G ++ + R S YAA A+ V + +G+
Sbjct: 248 HVLLKRNKTFVTVTDVRGNKKTGASAGCLEDRKGRSRLSKYAAEATAEHVGRAARKMGLK 307
Query: 215 ALHIKLRAT 189
++ +K++ T
Sbjct: 308 SVVMKVKGT 316
>UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whole
genome shotgun sequence; n=3; cellular organisms|Rep:
Chromosome undetermined SCAF14706, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 41.5 bits (93), Expect = 0.012
Identities = 20/72 (27%), Positives = 41/72 (56%)
Frame = -3
Query: 401 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLG 222
+AH+ A++N+T + VTD +G+ ++ R + G + + +++P AA A A K G
Sbjct: 106 IAHVKATYNNTHIQVTDSAGK-SMVRTSCGTEGFKNIKKSTPIAAQTAGISAAAKATAKG 164
Query: 221 ITALHIKLRATG 186
+T + + ++ G
Sbjct: 165 VTFVRVVVKGLG 176
>UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11;
n=85; Tracheophyta|Rep: Chloroplast 30S ribosomal
protein S11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 138
Score = 40.3 bits (90), Expect = 0.029
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 225
GV H+ ASFN+T V VTD+ GR G + R +P+AA AA +
Sbjct: 28 GVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTR-RGTPFAAQTAAGNAIRAVVDQ 86
Query: 224 GITALHIKLRATG 186
G+ ++++ G
Sbjct: 87 GMQRAEVRIKGPG 99
>UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29;
Magnoliophyta|Rep: Small subunit ribosomal protein -
Berberis thunbergii (Japanese barberry)
Length = 150
Score = 39.9 bits (89), Expect = 0.038
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = -3
Query: 401 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLG 222
+ H+ N+TFV VTD G + G ++ S YAA A+ V + LG
Sbjct: 46 LVHLLPLHNNTFVTVTDARGNKKTGASAGSLEEFKGGSRLSRYAAKATAEHVGRSARNLG 105
Query: 221 ITALHIKLRATGGNKTKTP--WSWCSVCTSGSC 129
+ ++ +K++ + K K SW T C
Sbjct: 106 MKSVVMKVKGSTYFKKKKAVILSWREGYTFAEC 138
>UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S11 - Neorickettsia sennetsu (strain Miyayama)
Length = 120
Score = 39.9 bits (89), Expect = 0.038
Identities = 21/71 (29%), Positives = 38/71 (53%)
Frame = -3
Query: 410 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCK 231
V G AH+ +FN+ ++ VTD G +G + K ++ +++ YAA A + K K
Sbjct: 8 VSGNAHVIVTFNNVYISVTDHQGNVQGWASSGSVGFKGNK-KSTAYAAQSVATTLMTKLK 66
Query: 230 TLGITALHIKL 198
+G+ L++ L
Sbjct: 67 RIGLKILNVHL 77
>UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S11 - Prototheca wickerhamii
Length = 128
Score = 39.1 bits (87), Expect = 0.066
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 225
G+ HI ++ N+T + +TDL G G + K R +++ YA+ AA+ +A K
Sbjct: 18 GIVHIQSTTNNTLITLTDLEGNTQFFVSAGTLGFKNSR-KSTVYASGAAAEALASKAFNE 76
Query: 224 GITALHIKLRATGGNK 177
G + +K++ G K
Sbjct: 77 GYRTIIVKIKGLGYGK 92
>UniRef50_Q9PQN5 Cluster: 30S ribosomal protein S11; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S11 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 121
Score = 38.3 bits (85), Expect = 0.12
Identities = 19/76 (25%), Positives = 42/76 (55%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 225
G+A+I A+ N+T + + D G +G + K + + +PY+A +AA+ A+ +
Sbjct: 12 GIAYIHATKNNTIITLADEQGSVLSWASSGSIGYKGTK-KKTPYSAGIAAEAAAKAVIDM 70
Query: 224 GITALHIKLRATGGNK 177
G+ ++ + + TG ++
Sbjct: 71 GLKSVEVHVNGTGASR 86
>UniRef50_UPI0000586F02 Cluster: PREDICTED: hypothetical protein
isoform 1; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein isoform 1 -
Strongylocentrotus purpuratus
Length = 261
Score = 36.3 bits (80), Expect = 0.47
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = -3
Query: 401 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLG 222
+ +I A++N+T V V + +GR T+AR + G + + + + AA AA A K G
Sbjct: 152 IVNIKATYNNTHVSVAEHTGR-TVARTSCGTEGFKNAKKGTAIAAQTAAIAAATKAVDKG 210
Query: 221 ITALHIKLRATG-GNKT 174
+ A+ + ++ G G +T
Sbjct: 211 MNAVRVVIKGIGPGRQT 227
>UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=2;
Arabidopsis thaliana|Rep: 30S ribosomal protein S11,
putative - Arabidopsis thaliana (Mouse-ear cress)
Length = 235
Score = 35.9 bits (79), Expect = 0.62
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = -3
Query: 416 ETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEK 237
ET + HI N+TFV VTD G +G + + + Y A A+++ +
Sbjct: 111 ETNADIIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRR 170
Query: 236 CKTLGITALHIKL 198
K +G+ ++ +K+
Sbjct: 171 AKAMGLKSVVVKV 183
>UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11;
n=10; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S11 - Cyanidium caldarium
Length = 129
Score = 35.9 bits (79), Expect = 0.62
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 225
G+ I ++FN+T V TD G+ IA +GG + + +P+AA A + + +
Sbjct: 19 GLIIINSTFNNTIVTATDCYGK-VIAWASGGTEGFKGAKKGTPFAAQSATEKLIKALLEQ 77
Query: 224 GITALHIKLRATG-GNKT 174
G +HI + G G +T
Sbjct: 78 GTQRIHISVSGPGPGRET 95
>UniRef50_Q7R4R8 Cluster: GLP_440_63181_70326; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_440_63181_70326 - Giardia lamblia
ATCC 50803
Length = 2381
Score = 35.5 bits (78), Expect = 0.82
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 311 MKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATG-GNKTKTPWSWCSVCTSG 135
+ V A R + S Y + + D E C + L +K++ G + WSWC CTS
Sbjct: 2022 LSVVAMRADNSCYPLLFSQYDRLETCAIYLLAELDLKMQEKSLGGVIEQCWSWCMECTSN 2081
Query: 134 S 132
S
Sbjct: 2082 S 2082
>UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639;
n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
protein PH1639 - Pyrococcus horikoshii
Length = 102
Score = 35.5 bits (78), Expect = 0.82
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 237 FLCYILCR---QHSSVG*RFITVSLHLHATSDTGDSFPAG*ISNMNECVI 377
F C+ C +H +G R I VS + H T+ + F G ISN+N VI
Sbjct: 51 FQCFFCCSPSSKHCCIGGRLIPVSFNYHTTAPSAYRFRTGDISNVNNGVI 100
>UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;
Streptophyta|Rep: Plastid 30S ribosomal protein S11 -
Epifagus virginiana (Beechdrops)
Length = 136
Score = 35.5 bits (78), Expect = 0.82
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAA 255
GV H+ SFN+T V VTD+ GR G K R + +AA +AA
Sbjct: 28 GVIHVQTSFNNTIVAVTDIKGRVVSWSSAGTCGFKGTR-RGTSFAAQIAA 76
>UniRef50_Q7VCT6 Cluster: Predicted protein; n=1; Prochlorococcus
marinus|Rep: Predicted protein - Prochlorococcus marinus
Length = 58
Score = 34.3 bits (75), Expect = 1.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 146 CTSGSCSFKYEDWPH*RCHPRTIRXDPEE 60
C++ SCSF Y+DW H R H + D E
Sbjct: 4 CSNRSCSFPYDDWHHCRIHRSKVTNDLTE 32
>UniRef50_Q8W9P7 Cluster: Ribosomal protein S11; n=1; Mesostigma
viride|Rep: Ribosomal protein S11 - Mesostigma viride
Length = 128
Score = 33.1 bits (72), Expect = 4.4
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 225
G+ H+ + N+T + +TD G TI + GM + + +A+ AQ + +CK L
Sbjct: 18 GILHVQTTLNNTIMTLTDRKG-NTIFGFSSGMLGFGGSRKKTRFASRSVAQHMVLRCKQL 76
Query: 224 GITALHIKLR 195
I L + ++
Sbjct: 77 RIQRLILAIK 86
>UniRef50_Q49081 Cluster: 30S ribosomal protein; n=1; Mycoplasma
capricolum|Rep: 30S ribosomal protein - Mycoplasma
capricolum
Length = 80
Score = 32.3 bits (70), Expect = 7.6
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -3
Query: 404 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYA 270
G+AHI ++FN+T V V+D G G + K + +++PYA
Sbjct: 11 GIAHIHSTFNNTIVTVSDEKGNVLSWSSAGAIGFKGSK-KSTPYA 54
>UniRef50_Q6IIT8 Cluster: HDC17116; n=1; Drosophila
melanogaster|Rep: HDC17116 - Drosophila melanogaster
(Fruit fly)
Length = 92
Score = 32.3 bits (70), Expect = 7.6
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 94 HLQCGQSSYLNEQEPEVQTEHQDQGVFVLFPPVARSFMC 210
HL GQ+ E+E E+Q E + FV+FPPV+ +C
Sbjct: 13 HLHKGQT----EREGEIQIERRPTVTFVIFPPVSNLVVC 47
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,094,925
Number of Sequences: 1657284
Number of extensions: 11710375
Number of successful extensions: 25795
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 24738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25780
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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