Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_L17
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical pr... 65 5e-11
Z81544-6|CAI46607.1| 376|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 29 2.5
Z82080-1|CAB54322.3| 320|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z34533-9|CAA84303.2| 368|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z30973-5|CAA83224.2| 368|Caenorhabditis elegans Hypothetical pr... 28 5.8
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 28 5.8
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 28 5.8
U80843-9|AAB37969.1| 392|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical
protein C34C6.4 protein.
Length = 599
Score = 64.9 bits (151), Expect = 5e-11
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Frame = -3
Query: 452 LHPESRGKIALKSSNPEDPPIIYSGYFTNENDLDNFAHYLENFNTVINSTHFKKLKSQVV 273
+ +S+G I L++ +P PII Y ++D F + + S F + + + +
Sbjct: 436 MRSQSKGYIMLQAKDPRRAPIINPNYMEEDSDWREFRKCIRVSRELFASKAFDEFRGKEL 495
Query: 272 DLKVKQCRQWPFGSHEYWACYALNLASTQYHTVGTCAMG---DKDIGVVDSRLRVHGVTG 102
C+ S + A++ YH TC MG DK V + V+G
Sbjct: 496 -APGPDCQ-----SDADIDRFVKEKAASAYHPSCTCKMGSENDKMAVVNPETMGVYGTEN 549
Query: 101 LRVVDASVMPTITSGNTXAPGGMRAEKAAEM 9
L+VVDASVMP+I SGN AP M AE+AA++
Sbjct: 550 LKVVDASVMPSIVSGNLNAPVIMMAERAADL 580
>Z81544-6|CAI46607.1| 376|Caenorhabditis elegans Hypothetical
protein F49C5.9 protein.
Length = 376
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +1
Query: 358 SFSLVK*PE*IIGGSSGLELFRAIFPLDSGCSSVISENTVSCPKPASDRAMHISSLNMSI 537
+F ++ P +G S + I P C +V+ T + P P A SS +MS+
Sbjct: 301 TFLIIMSPAHFLGISLSVTYCVIISPYRRVCIAVLMLITCTSPSPHPRSANSTSSSSMSV 360
Query: 538 CEHISTGRNEAV 573
EHI N V
Sbjct: 361 IEHIMRRHNYRV 372
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -3
Query: 542 SQM--LMLSDDICIALSEAGLGQETVFSLITLLHPESRGKIALKSSNPED 399
SQM L+LS CI +S+ G G+ F L LLH ++ ++A N E+
Sbjct: 112 SQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDA--QLAQYEKNDEE 159
>Z82080-1|CAB54322.3| 320|Caenorhabditis elegans Hypothetical
protein W09G3.1a protein.
Length = 320
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 601 SGYDWDLFKATKPKMSGTEPYPC 669
SG+DWD + KP G E + C
Sbjct: 108 SGFDWDTHSSEKPIFGGFEAHSC 130
>Z34533-9|CAA84303.2| 368|Caenorhabditis elegans Hypothetical
protein B0285.10 protein.
Length = 368
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -3
Query: 398 PPIIYSGYFT-NENDLDNFAHYLENFNTVINSTHFKKLKSQVVDLKVKQCRQ-WPFGSHE 225
P I+ + T N +L F + I + SQV L +++C+ WP +H
Sbjct: 263 PGIVINEELTDNPPNLQAFCEAYVDSENKIKGLLSSNISSQVNSL-IQECKFFWPI-THL 320
Query: 224 YWACYALNL 198
+WAC+ + L
Sbjct: 321 FWACFIMKL 329
>Z30973-5|CAA83224.2| 368|Caenorhabditis elegans Hypothetical
protein B0285.10 protein.
Length = 368
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -3
Query: 398 PPIIYSGYFT-NENDLDNFAHYLENFNTVINSTHFKKLKSQVVDLKVKQCRQ-WPFGSHE 225
P I+ + T N +L F + I + SQV L +++C+ WP +H
Sbjct: 263 PGIVINEELTDNPPNLQAFCEAYVDSENKIKGLLSSNISSQVNSL-IQECKFFWPI-THL 320
Query: 224 YWACYALNL 198
+WAC+ + L
Sbjct: 321 FWACFIMKL 329
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 79 TLASTTRRPVTP*TLNLESTTPISLSPMA 165
T +TT RP TP +TTP++ +P+A
Sbjct: 300 TPLATTSRPTTPSPTTPRATTPLATTPLA 328
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 79 TLASTTRRPVTP*TLNLESTTPISLSPMAQVPT 177
T+ ST P TP T+ TTP + + M PT
Sbjct: 177 TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 209
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 79 TLASTTRRPVTP*TLNLESTTPISLSPMAQVPT 177
T+ ST P TP T+ TTP + + M PT
Sbjct: 190 TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 222
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 79 TLASTTRRPVTP*TLNLESTTPISLSPMAQVPT 177
T+ ST P TP T+ TTP + + M PT
Sbjct: 203 TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 235
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 79 TLASTTRRPVTP*TLNLESTTPISLSPMAQVPT 177
T+ ST P TP T+ TTP + + M PT
Sbjct: 216 TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 248
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 79 TLASTTRRPVTP*TLNLESTTPISLSPMAQVPT 177
T+ ST P TP T+ TTP + + M PT
Sbjct: 229 TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 261
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 79 TLASTTRRPVTP*TLNLESTTPISLSPMAQVPT 177
T+ ST P TP T+ TTP + + M PT
Sbjct: 242 TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 274
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 79 TLASTTRRPVTP*TLNLESTTPISLSPMAQVPT 177
T+ ST P TP T+ TTP + + M PT
Sbjct: 255 TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 287
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 79 TLASTTRRPVTP*TLNLESTTPISLSPMAQVPT 177
T+ ST P TP T+ TTP + + M PT
Sbjct: 291 TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 323
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 79 TLASTTRRPVTP*TLNLESTTPISLSPMAQVPT 177
T+ ST P TP T+ TTP + + M PT
Sbjct: 304 TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 336
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 79 TLASTTRRPVTP*TLNLESTTPISLSPMAQVPT 177
T+ ST P TP T+ TTP + + M PT
Sbjct: 317 TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 349
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 79 TLASTTRRPVTP*TLNLESTTPISLSPMAQVPT 177
T+ ST P TP T+ TTP + + M PT
Sbjct: 330 TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 362
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 79 TLASTTRRPVTP*TLNLESTTPISLSPMAQVPT 177
T+ ST P TP T+ TTP + + M PT
Sbjct: 343 TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 375
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 79 TLASTTRRPVTP*TLNLESTTPISLSPMAQVPT 177
T+ ST P TP T+ TTP + + M PT
Sbjct: 356 TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 388
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 79 TLASTTRRPVTP*TLNLESTTPISLSPMAQVPT 177
T+ ST P TP T+ TTP + + M PT
Sbjct: 369 TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 401
>U80843-9|AAB37969.1| 392|Caenorhabditis elegans Hypothetical
protein C32B5.14 protein.
Length = 392
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 392 IIYSGYFTNENDLDNFAHYLENFNTVINSTHFKKLKSQVVD 270
I++ G T+ N L AH++ F+ I + H +L VVD
Sbjct: 298 IVFLGDCTSSNFLKILAHWILEFHRDIGTYHTYQLSEAVVD 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,777,485
Number of Sequences: 27780
Number of extensions: 320911
Number of successful extensions: 930
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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