Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_L16
         (754 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...   176   1e-44
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...   120   1e-27
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    32   0.50 
Z78065-3|CAB01517.2|  406|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,...    29   4.7  
AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical ...    28   8.2  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score =  176 bits (429), Expect = 1e-44
 Identities = 96/199 (48%), Positives = 123/199 (61%), Gaps = 3/199 (1%)
 Frame = -2

Query: 675 VGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIAS 499
           V DVK+  GL   N  LAE+++ +G+  S  D Q+F  +G AP A+  P+V RWY  +AS
Sbjct: 2   VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVAS 61

Query: 498 YTSAERKTWSQ--GTSPLXXXXXXXXXXXXXXXXXXXDVDLFGSGXXXXXXXXXXXXXXR 325
           YT AERKTW+   G++P                      DLFGS               R
Sbjct: 62  YTDAERKTWASAGGSAPAAAAADGDDF------------DLFGSDDEEEDAEKAKIVEER 109

Query: 324 LKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGY 145
           L AYA+KK+KK   IAKSS++LDVKPWDDETD+ EME  VR+IEM+GL+WG +KL+P+GY
Sbjct: 110 LAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGY 169

Query: 144 GINKLQIMCXIEDDKVAVD 88
           GI KLQI+  IED KV+VD
Sbjct: 170 GIKKLQIITVIEDLKVSVD 188


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score =  120 bits (288), Expect = 1e-27
 Identities = 59/100 (59%), Positives = 71/100 (71%)
 Frame = -2

Query: 387 DLFGSGXXXXXXXXXXXXXXRLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQ 208
           DLFGS               RL AYA KK+ K   IAKSS++LDVKPWDDETD+ EME  
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198

Query: 207 VRTIEMEGLLWGASKLVPVGYGINKLQIMCXIEDDKVAVD 88
           VR+IEM+GL+WG +KL+P+GYGI KLQI+  IED KV+VD
Sbjct: 199 VRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVD 238


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +3

Query: 465 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 623
           P  + C QP CM   + + VV+     PAP Q     + Q +++C+QT+   Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171


>Z78065-3|CAB01517.2|  406|Caenorhabditis elegans Hypothetical
           protein T09E8.4 protein.
          Length = 406

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = +1

Query: 220 FLHIGFIIPWLDIKENRGLGNESWFLRLLV-SICFQTFFSNSFSFCILFLVTRTK*INVV 396
           FL+I  I     +K++    NE   +R+LV +I    FF  S S   +FL+ +T   N  
Sbjct: 291 FLYIAVIFKIFAMKKSTLNKNE---IRVLVQAIVIFVFFQASSS---VFLICQTIAFNTA 344

Query: 397 VIVVFRCWGGSRGFSTGGQWAGALRPCFAFSRSV*SNLIIPS*YVGKVSGRRLANLL 567
              V +     R  +T   +AGA  PCF+F  S     ++ S  +  VS +  +NL+
Sbjct: 345 TAFVIK-----RIINTLEIFAGAATPCFSFFTSKEIRKLLSS-KIAAVSSQGSSNLV 395


>Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical
           protein AC3.4 protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +3

Query: 465 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 623
           P  + C QP CM   + + VV+     PA  Q     + Q +++C+QT+   Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171


>U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,
           short chain protein27 protein.
          Length = 816

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -2

Query: 270 SILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGY 145
           SI+L VKP DDE  ++++ NQ     M G LW A++     Y
Sbjct: 436 SIMLCVKPADDEI-VQKIRNQ-----MSGALWSAAQFAVTSY 471


>AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical
           protein W07E6.2 protein.
          Length = 473

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = -2

Query: 195 EMEGLLWGASKLVPVGYGINKLQIMC----XIEDDKVAVDLLT 79
           E E  L G+  LVPV    N+LQI+C       DD V +   T
Sbjct: 14  EDENELGGSGILVPVDISTNELQILCNQLLGSSDDPVPISFFT 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,531,661
Number of Sequences: 27780
Number of extensions: 309914
Number of successful extensions: 844
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)