Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_L14
         (479 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    58   6e-11
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.0  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   3.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.2  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 57.6 bits (133), Expect = 6e-11
 Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = -3

Query: 321 KDAVILQQTFDNIGLEG-YGFGFETSDGKTAQESAVLKNVGTENEALEVRGQYSYVDLDG 145
           KDAVI  Q  + +  +G Y   FETS+G + QES   K V  E   +  +G  SY   DG
Sbjct: 25  KDAVITSQQLE-VNFDGNYINNFETSNGISHQESGQPKQVDNETPVVS-QGSDSYTAPDG 82

Query: 144 KVHETTYTADENGFHPSGADIPQLP 70
           +    TY ADENGF   G+ IP  P
Sbjct: 83  QQVSITYVADENGFQVQGSHIPTAP 107


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/36 (25%), Positives = 14/36 (38%)
 Frame = +2

Query: 92  PEGWKPFSSAVYVVSWTFPSRSTYEYCPRTSRASFS 199
           PE WKP     + +    P        P++  +S S
Sbjct: 418 PEDWKPLDKCYFCLDGKLPHDDQPPLSPQSDSSSSS 453


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 151 EVDVRVLSANLKSLIFGT 204
           +V+ R+L AN+K LI  T
Sbjct: 395 DVNFRILGANVKELIRNT 412


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +3

Query: 78  GECLLRRDGNHFRQRCTSSRGPFHRGRRTSTVREPQEPHFR 200
           G C  RR  N      +S     HR   + T + PQ P FR
Sbjct: 534 GLCPHRRRANS--GSTSSGDDELHRASLSKTPQPPQCPRFR 572


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,090
Number of Sequences: 438
Number of extensions: 2429
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)