Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_L10
         (469 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   5.7  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   7.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   9.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   9.9  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 308 RYDKLKRNWRKPRGIDNR 255
           +++ L  +W  PRG D+R
Sbjct: 631 QFNGLDVDWEYPRGADDR 648


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 222 HQVLTLEPPADSVVNTSRFTPI 287
           HQ+LTL    DS++   R+  +
Sbjct: 129 HQILTLLMDIDSLITKWRYNHV 150


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 222 HQVLTLEPPADSVVNTSRFTPI 287
           HQ+LTL    DS++   R+  +
Sbjct: 289 HQILTLLMDIDSLITKWRYNHV 310


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 222 HQVLTLEPPADSVVNTSRFTPI 287
           HQ+LTL    DS++   R+  +
Sbjct: 289 HQILTLLMDIDSLITKWRYNHV 310


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 464 EFGRPMPFSC 435
           +FGRP  F+C
Sbjct: 340 DFGRPATFTC 349


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 152 LGPYGIHLGAYDGSSC 199
           LGP G+HL   +  SC
Sbjct: 302 LGPAGVHLRKKNIHSC 317


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,690
Number of Sequences: 336
Number of extensions: 1702
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)