Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_L10
         (469 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g46430.2 68418.m05716 60S ribosomal protein L32 (RPL32B)           131   3e-31
At5g46430.1 68418.m05715 60S ribosomal protein L32 (RPL32B)           131   3e-31
At4g18100.1 68417.m02692 60S ribosomal protein L32 (RPL32A) ribo...   130   3e-31
At1g53920.1 68414.m06138 GDSL-motif lipase/hydrolase family prot...    29   2.1  
At4g07670.1 68417.m01203 protease-associated (PA) domain-contain...    27   4.8  
At2g34240.1 68415.m04189 hypothetical protein contains Pfam prof...    27   6.3  
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t...    27   8.4  

>At5g46430.2 68418.m05716 60S ribosomal protein L32 (RPL32B)
          Length = 133

 Score =  131 bits (316), Expect = 3e-31
 Identities = 59/95 (62%), Positives = 74/95 (77%)
 Frame = -3

Query: 383 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 204
           MA+ P+    +VKKR+ +FIR QSDR   +K +WR+P+GID+RVRR+FKG  LMPN+GYG
Sbjct: 1   MAV-PLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYG 59

Query: 203 SNKKTRHMLPNGFRKVLVHNVKELESLMMQNRKXC 99
           S+KKTRH LPNGF+K +VHN  ELE LMM NR  C
Sbjct: 60  SDKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYC 94


>At5g46430.1 68418.m05715 60S ribosomal protein L32 (RPL32B)
          Length = 133

 Score =  131 bits (316), Expect = 3e-31
 Identities = 59/95 (62%), Positives = 74/95 (77%)
 Frame = -3

Query: 383 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 204
           MA+ P+    +VKKR+ +FIR QSDR   +K +WR+P+GID+RVRR+FKG  LMPN+GYG
Sbjct: 1   MAV-PLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYG 59

Query: 203 SNKKTRHMLPNGFRKVLVHNVKELESLMMQNRKXC 99
           S+KKTRH LPNGF+K +VHN  ELE LMM NR  C
Sbjct: 60  SDKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYC 94


>At4g18100.1 68417.m02692 60S ribosomal protein L32 (RPL32A)
           ribosomal protein L32, human, PIR1:R5HU32
          Length = 133

 Score =  130 bits (315), Expect = 3e-31
 Identities = 59/95 (62%), Positives = 74/95 (77%)
 Frame = -3

Query: 383 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 204
           MA+ P+    +VKKR+ +FIR QSDR   +K +WR+P+GID+RVRR+FKG  LMPN+GYG
Sbjct: 1   MAV-PLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYG 59

Query: 203 SNKKTRHMLPNGFRKVLVHNVKELESLMMQNRKXC 99
           S+KKTRH LPNGF+K +VHN  ELE LMM NR  C
Sbjct: 60  SDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYC 94


>At1g53920.1 68414.m06138 GDSL-motif lipase/hydrolase family protein
           similar to Anther-specific proline-rich proteins
           SP|P40603 SP|P40602 from {Arabidopsis thaliana};
           contains Pfam profile PF00657: GDSL-like
           Lipase/Acylhydrolase
          Length = 385

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = -3

Query: 326 IRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 171
           +R Q D Y K++R WR   G +   +R  +  YL   I  GSN  +   L N
Sbjct: 146 LRTQLDHYKKVERLWRTNFGKEESKKRISRAVYL---ISIGSNDYSSIFLTN 194


>At4g07670.1 68417.m01203 protease-associated (PA) domain-containing
           protein similar to PF02225: PA domain; similar to
           N-acetylated-alpha-linked acidic dipeptidase II
           (NAALADase II) (SP:Q9Y3Q) {Homo sapiens};similar to
           Glutamate carboxypeptidase II (Membrane glutamate
           carboxypeptidase) (mGCP) (N-acetylated-alpha-linked
           acidic dipeptidase I) (NAALADase I)
           (Pteroylpoly-gamma-glutamate
           carboxypeptidase)(Folylpoly-gamma-glutamate
           carboxypeptidase) (FGCP) (Folate hydrolase 1)
           (Prostate-specific membrane antigen homolog) (SP|O77564)
           {Sus scrofa}
          Length = 280

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -3

Query: 380 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPR 270
           A+ P     ++ + +K +++H + R DKL++   KPR
Sbjct: 194 AVDPNSGTAVLMEASKSYLQHIAQRLDKLQKRGWKPR 230


>At2g34240.1 68415.m04189 hypothetical protein contains Pfam
           profiles PF04780: Protein of unknown function (DUF629),
           PF04781: Protein of unknown function (DUF627)
          Length = 712

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = -3

Query: 338 TKRFIRHQSDRY-DKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGFR 162
           +++ I +  ++Y DK+K ++ K   + N +R R+   ++   + Y      RH+L N  +
Sbjct: 216 SRKLIDYVENKYVDKVKEDFGKCVSVANNLRWRYWKCHICSQVYYCFTDCQRHILDNHVQ 275

Query: 161 K 159
           K
Sbjct: 276 K 276


>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
           enhancer of zeste-like protein 1(EZA1) (GI:4185507)
           [Arabidopsis thaliana]; similar to polycomb group
           [Arabidopsis thaliana] GI:1903019 (curly leaf); contains
           Pfam profile PF00856: SET domain
          Length = 856

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 396 RNIQDGYKTCLQADNRQKEDE 334
           RN+  G KTCL   N  +E+E
Sbjct: 517 RNLLSGLKTCLDVSNYMRENE 537


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,625,003
Number of Sequences: 28952
Number of extensions: 157983
Number of successful extensions: 459
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 791932800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)