Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_L09
(530 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 98 4e-23
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 1.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 1.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 3.4
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 4.5
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 4.5
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 4.5
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 4.5
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 98.3 bits (234), Expect = 4e-23
Identities = 45/99 (45%), Positives = 63/99 (63%)
Frame = -1
Query: 401 APVVKSSYDITPEGHFQFNYETGNGIYAQAEGAVKNVNSEYPAIEVKGAYKYTSPDGQPI 222
A + ++ +G++ N+ET NGI Q G K V++E P + +G+ YT+PDGQ +
Sbjct: 27 AVITSQQLEVNFDGNYINNFETSNGISHQESGQPKQVDNETPVVS-QGSDSYTAPDGQQV 85
Query: 221 DLAYVADENGYQPQGSHLPTPHPIPEAIARALAYIEAHP 105
+ YVADENG+Q QGSH+PT PIP I RAL + AHP
Sbjct: 86 SITYVADENGFQVQGSHIPTAPPIPPEIQRALEWNAAHP 124
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 1.5
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = -3
Query: 159 SPNSRGDRPR---SCLHRGPPPQPL 94
SP+S D R SCL GPP PL
Sbjct: 420 SPSSLADGARFGGSCLIHGPPLPPL 444
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 1.5
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = -3
Query: 159 SPNSRGDRPR---SCLHRGPPPQPL 94
SP+S D R SCL GPP PL
Sbjct: 420 SPSSLADGARFGGSCLIHGPPLPPL 444
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 2.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 391 SNPATTSPLKATSNSTTRPATEFT 320
+ PAT S + ATSN+T T T
Sbjct: 236 TGPATPSAVVATSNATAAMTTGTT 259
Score = 22.6 bits (46), Expect = 2.6
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = -2
Query: 385 PATTSPLKATSNSTTRPATEFTPRLKVPSRTSTQNTPP 272
PATT T+ +TT T T S PP
Sbjct: 654 PATTITTITTTTTTTTTTTTTTTTPNTTQNASATTPPP 691
Score = 22.2 bits (45), Expect = 3.4
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -1
Query: 239 PDGQP-IDLAYVADENGYQPQGSHLPTPHPIPEAIARA 129
P+ P +DL+ + G GS T P P +I+RA
Sbjct: 1369 PERVPTVDLSPSPSDRGRNDDGSDRLTSPPTPLSISRA 1406
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 3.4
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 292 STQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 182
S N +K+ + LP+ DNP S +L NP
Sbjct: 293 SRMNLTLAKMEKTSKPLPMVDNPE-STGNLVYIYNNP 328
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 4.5
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -1
Query: 308 GAVKNVNSEYPAIEVKGAYKYTSPDGQ--PID 219
G V + P E Y+Y PDG PID
Sbjct: 264 GLPVGVTAAIPTSENPADYRYFCPDGSKVPID 295
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 4.5
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -1
Query: 308 GAVKNVNSEYPAIEVKGAYKYTSPDGQ--PID 219
G V + P E Y+Y PDG PID
Sbjct: 264 GLPVGVTAAIPTSENPADYRYFCPDGSKVPID 295
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -2
Query: 307 VPSRTSTQNTPPSKLRVPTSTLP 239
+P S TP S + P TLP
Sbjct: 654 LPRPISCHTTPDSFIEAPNKTLP 676
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 4.5
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -1
Query: 308 GAVKNVNSEYPAIEVKGAYKYTSPDGQ--PID 219
G V + P E Y+Y PDG PID
Sbjct: 264 GLPVGVTAAIPTSENPADYRYFCPDGSKVPID 295
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,170
Number of Sequences: 438
Number of extensions: 3113
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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