Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_L07
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 342 1e-94
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 342 1e-94
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 342 1e-94
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 342 1e-94
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 342 1e-94
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 342 1e-94
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 341 2e-94
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 341 2e-94
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 341 2e-94
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 335 2e-92
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 320 6e-88
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 166 2e-41
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 157 8e-39
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 1e-27
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 108 5e-24
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 96 2e-20
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 76 3e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 76 3e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 4.5
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 342 bits (841), Expect = 1e-94
Identities = 160/171 (93%), Positives = 167/171 (97%)
Frame = -2
Query: 736 EREIVRDIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQP 557
EREIVRDIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQP
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQP 265
Query: 556 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 377
SFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST
Sbjct: 266 SFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST 325
Query: 376 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 224
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 326 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 342 bits (841), Expect = 1e-94
Identities = 160/171 (93%), Positives = 167/171 (97%)
Frame = -2
Query: 736 EREIVRDIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQP 557
EREIVRDIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQP
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQP 265
Query: 556 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 377
SFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST
Sbjct: 266 SFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST 325
Query: 376 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 224
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 326 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 342 bits (841), Expect = 1e-94
Identities = 160/171 (93%), Positives = 167/171 (97%)
Frame = -2
Query: 736 EREIVRDIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQP 557
EREIVRDIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQP
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQP 265
Query: 556 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 377
SFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST
Sbjct: 266 SFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST 325
Query: 376 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 224
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 326 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 342 bits (841), Expect = 1e-94
Identities = 160/171 (93%), Positives = 167/171 (97%)
Frame = -2
Query: 736 EREIVRDIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQP 557
EREIVRDIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQP
Sbjct: 162 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQP 221
Query: 556 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 377
SFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST
Sbjct: 222 SFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST 281
Query: 376 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 224
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 282 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 342 bits (841), Expect = 1e-94
Identities = 160/171 (93%), Positives = 167/171 (97%)
Frame = -2
Query: 736 EREIVRDIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQP 557
EREIVRDIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQP
Sbjct: 192 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQP 251
Query: 556 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 377
SFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST
Sbjct: 252 SFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST 311
Query: 376 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 224
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 312 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 342 bits (841), Expect = 1e-94
Identities = 160/171 (93%), Positives = 167/171 (97%)
Frame = -2
Query: 736 EREIVRDIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQP 557
EREIVRDIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQP
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQP 265
Query: 556 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 377
SFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST
Sbjct: 266 SFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST 325
Query: 376 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 224
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 326 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 341 bits (839), Expect = 2e-94
Identities = 159/171 (92%), Positives = 167/171 (97%)
Frame = -2
Query: 736 EREIVRDIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQP 557
EREIVRDIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQP
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQP 265
Query: 556 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 377
SFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST
Sbjct: 266 SFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST 325
Query: 376 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 224
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 326 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 341 bits (839), Expect = 2e-94
Identities = 159/171 (92%), Positives = 167/171 (97%)
Frame = -2
Query: 736 EREIVRDIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQP 557
EREIVRDIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQP
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQP 265
Query: 556 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 377
SFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST
Sbjct: 266 SFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST 325
Query: 376 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 224
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 326 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 341 bits (839), Expect = 2e-94
Identities = 159/171 (92%), Positives = 167/171 (97%)
Frame = -2
Query: 736 EREIVRDIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQP 557
EREIVRDIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQP
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQP 265
Query: 556 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 377
SFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST
Sbjct: 266 SFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST 325
Query: 376 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 224
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 326 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 335 bits (824), Expect = 2e-92
Identities = 158/171 (92%), Positives = 166/171 (97%)
Frame = -2
Query: 736 EREIVRDIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQP 557
EREIVRDIKEKL YVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQP
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQP 265
Query: 556 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 377
SFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAP T
Sbjct: 266 SFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-T 324
Query: 376 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 224
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 325 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 320 bits (786), Expect = 6e-88
Identities = 149/171 (87%), Positives = 159/171 (92%)
Frame = -2
Query: 736 EREIVRDIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQP 557
EREIVRDIKEKL YVA DFE E+A AA+S+SLEKSYELPDGQVITIGNERFRCPE LFQP
Sbjct: 205 EREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQP 264
Query: 556 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 377
+F+GME GIHET Y SIMKCDVDIRKDLYANTV+SGGT+M+PGIADRMQKEI LAPST
Sbjct: 265 AFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPST 324
Query: 376 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 224
+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 325 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 166 bits (403), Expect = 2e-41
Identities = 81/171 (47%), Positives = 111/171 (64%)
Frame = -2
Query: 736 EREIVRDIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQP 557
E EIVR++KE Y+ALD T + S++ SY LPD I I N FR PE LF+P
Sbjct: 209 EFEIVREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKP 263
Query: 556 SFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST 377
+G E G+ V SIMKCDVD+R+ LY+N V+SGGTT++ G DR+ E+ +AP+
Sbjct: 264 DLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPAD 323
Query: 376 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 224
KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G +H++ F
Sbjct: 324 GKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 157 bits (381), Expect = 8e-39
Identities = 79/173 (45%), Positives = 107/173 (61%), Gaps = 13/173 (7%)
Frame = -2
Query: 730 EIVRDIKEKLXYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSF 551
E VR +KEKL Y+A D EQE A +T L + Y LPDG+VI +G ERF PE LFQP
Sbjct: 211 ETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHL 270
Query: 550 LGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL------ 389
+ +E G+ E ++ I D+D R D Y + V+SGGTTMYPG+ R++KE+ L
Sbjct: 271 INVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVL 330
Query: 388 -----APSTIKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKEEYDESG 251
A KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 331 HGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (289), Expect = 1e-27
Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Frame = -2
Query: 631 YELPDGQVITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLY 467
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 466 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLST 296
+N ++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 295 FQQMWISKEEYDESGPGIVHRKC 227
FQQMW+SK EYDESG IV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 108 bits (259), Expect = 5e-24
Identities = 53/160 (33%), Positives = 96/160 (60%), Gaps = 3/160 (1%)
Frame = -2
Query: 736 EREIVRDIKEKLXYVALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNERFRCPEAL 566
E+ I+R E+ YV D+++E + T SL+ P Q I N RF C E L
Sbjct: 380 EKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGL 439
Query: 565 FQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA 386
F+P G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGIA+++++E++ +
Sbjct: 440 FKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVV 499
Query: 385 PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 266
P+TI ++ P R + ++G I+AS STF+ IS ++
Sbjct: 500 PNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 96.3 bits (229), Expect = 2e-20
Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 25/188 (13%)
Frame = -2
Query: 730 EIVRDIKEKLXYVALDFEQEMATAAASTSLEKSYELPDG-QVIT-------IGNERFRCP 575
E+ + IKEK YV D +E T K DG IT +G ERF P
Sbjct: 229 EVAKMIKEKFCYVCPDVMKEFVKY--DTDAAKWLRTYDGINSITKKPFNVDVGYERFLGP 286
Query: 574 EALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEI 398
E F P F E + I +T+ I +C +D+R+ LY N V+SGG+TM+ A ++Q+++
Sbjct: 287 EIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDV 346
Query: 397 TALA----------------PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 266
L+ P I +++I+ ++Y+VW GGS+LAS S F Q+ +K E
Sbjct: 347 KRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAE 406
Query: 265 YDESGPGI 242
Y E GP I
Sbjct: 407 YMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 75.8 bits (178), Expect = 3e-14
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Frame = -2
Query: 697 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 518
Y+ DF ++P I +G ERF PE LF PS + ++ CG+ E
Sbjct: 236 YIMPDFHSTFRGVVKDVKEPHDPQIPS---IHLGVERFAIPEILFNPSDIDIDQCGVAEA 292
Query: 517 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI---IAPPE 347
V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+
Sbjct: 293 VIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQ 352
Query: 346 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 242
W G L L+ + WI+++++DE G +
Sbjct: 353 T--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 75.8 bits (178), Expect = 3e-14
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Frame = -2
Query: 697 YVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHET 518
Y+ DF ++P I +G ERF PE LF PS + ++ CG+ E
Sbjct: 236 YIMPDFHSTFRGVVKDVKEPHDPQIPS---IHLGVERFAIPEILFNPSDIDIDQCGVAEA 292
Query: 517 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI---IAPPE 347
V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+
Sbjct: 293 VIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQ 352
Query: 346 RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 242
W G L L+ + WI+++++DE G +
Sbjct: 353 T--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = -2
Query: 517 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 353
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 352 PERK----YSVWIGGSILASL-STFQQMWISKEEY 263
E K + W+G S+L SL T ++ ++ EE+
Sbjct: 254 SEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -1
Query: 530 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 387
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 431 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 333
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,493,365
Number of Sequences: 27780
Number of extensions: 296698
Number of successful extensions: 901
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -