Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_L06
         (596 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    72   4e-15
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   0.85 
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   2.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   2.0  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    22   3.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   4.5  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.5  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   4.5  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   4.5  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.9  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 71.7 bits (168), Expect = 4e-15
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = -3

Query: 591 ARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQ-AKDLVSVL 415
           ARGLD+  +++VIN+D P S ++Y+HRIGRTGR  +KG + +FF     R  A DL  +L
Sbjct: 470 ARGLDIKDVQHVINYDLPKSIDEYVHRIGRTGRVGNKGKATSFFDEDQDRNLASDLAKIL 529

Query: 414 QEANQMISPQLQS 376
            +A Q I   L S
Sbjct: 530 SQAKQEIPEWLGS 542


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = -3

Query: 465 FFTPSNSRQA---KDLVSVLQEANQMISPQL 382
           FF+P   R     K LV V +  NQ+ +PQL
Sbjct: 73  FFSPKIKRMVLLHKTLVRVAKSLNQVFAPQL 103


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 510 YDGCNPPTNLDNQNLLH 560
           Y+G N   NLDN  L+H
Sbjct: 358 YEGPNSENNLDNFYLIH 374


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 264 YSCQNCFRV*KSRHHLVH 317
           + C  C    + RHHLVH
Sbjct: 247 FECDKCRGRFRRRHHLVH 264


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 173 YITRIHPLRNANKNLI 220
           Y+   HPL  +NKN I
Sbjct: 45  YVKHFHPLALSNKNAI 60


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 483 LILNVQFSQYDGCNPPTNLD 542
           ++ N   S+Y+ C+ P N+D
Sbjct: 72  MVFNDYSSEYEKCDLPFNID 91


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 510 YDGCNPPTNLDNQNLLH 560
           Y G N   NLDN  L+H
Sbjct: 356 YGGPNSENNLDNFYLIH 372


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 510 YDGCNPPTNLDNQNLLH 560
           Y G N   NLDN  L+H
Sbjct: 358 YGGPNSENNLDNFYLIH 374


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 510 YDGCNPPTNLDNQNLLH 560
           Y G N   NLDN  L+H
Sbjct: 356 YGGPNSENNLDNFYLIH 372


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -3

Query: 504 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQM 397
           R GR+ ++G  Y  F P +    +D  S+     QM
Sbjct: 70  RYGRAAAQGMPYPRFPPYDRMDIRDRRSLHGPQQQM 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,055
Number of Sequences: 336
Number of extensions: 2722
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)