Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_L05
(710 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 141 6e-34
02_02_0678 + 12868735-12868739,12869576-12869795,12870280-128704... 128 6e-30
08_02_1573 + 27956351-27956409,27956411-27956630,27957000-279571... 127 8e-30
08_02_1568 + 27922338-27922342,27922839-27923058,27923369-279235... 126 1e-29
05_07_0079 - 27539389-27539892,27540059-27540343,27540453-275405... 43 3e-04
04_04_0401 - 24946801-24947562 42 5e-04
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 36 0.042
05_03_0678 - 16871481-16871620,16871836-16871881,16872170-168722... 35 0.073
06_03_0049 + 15961706-15962017,15962952-15963851,15964769-159649... 31 0.90
02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 30 2.1
06_03_0300 + 19299378-19299688,19299839-19300268 29 2.8
04_04_1049 + 30414545-30414596,30414732-30414853,30415121-304151... 29 3.6
09_06_0364 + 22554082-22554225,22554306-22554520,22554671-225547... 29 4.8
06_03_0225 - 18413668-18413751,18414641-18415493,18417497-18417516 29 4.8
03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020... 29 4.8
03_02_0221 + 6533643-6533687,6533860-6533955,6535323-6535682,653... 28 8.4
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 141 bits (341), Expect = 6e-34
Identities = 68/130 (52%), Positives = 87/130 (66%)
Frame = -3
Query: 648 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 469
K+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPKM
Sbjct: 3 KLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62
Query: 468 QVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQIPRL 289
+VC+LGD QH +EA+ + + M ASE++IKQIPRL
Sbjct: 63 KVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 122
Query: 288 LGPGLNKAGK 259
LGPGLNKAGK
Sbjct: 123 LGPGLNKAGK 132
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/65 (60%), Positives = 53/65 (81%)
Frame = -2
Query: 217 RLMKXKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHM 38
++ + K T+KFQ+KKVLC+ VAVG+ M ++ QNV +S+NFLVSLLKK+WQNVR L++
Sbjct: 168 KVNETKATVKFQLKKVLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYL 227
Query: 37 KSTMG 23
KSTMG
Sbjct: 228 KSTMG 232
>02_02_0678 +
12868735-12868739,12869576-12869795,12870280-12870430,
12870853-12871058,12871166-12871219
Length = 211
Score = 128 bits (308), Expect = 6e-30
Identities = 61/124 (49%), Positives = 81/124 (65%)
Frame = -3
Query: 648 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 469
K+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK+
Sbjct: 3 KLQSDALREAISQIANDSREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKL 62
Query: 468 QVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQIPRL 289
+VC+LGD QH +EA+ + + M ASE++IKQIPRL
Sbjct: 63 KVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 122
Query: 288 LGPG 277
LGPG
Sbjct: 123 LGPG 126
Score = 89.4 bits (212), Expect = 2e-18
Identities = 40/69 (57%), Positives = 54/69 (78%)
Frame = -2
Query: 217 RLMKXKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHM 38
++ + K T+KFQ+KKVLC+ VAVG+ M ++ QNV +S+NFLVSLLKK+WQNVR L++
Sbjct: 141 KVNETKATVKFQLKKVLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYL 200
Query: 37 KSTMGPPQR 11
KSTMG R
Sbjct: 201 KSTMGKVYR 209
>08_02_1573 +
27956351-27956409,27956411-27956630,27957000-27957150,
27957602-27957807,27957967-27958020
Length = 229
Score = 127 bits (307), Expect = 8e-30
Identities = 64/124 (51%), Positives = 80/124 (64%)
Frame = -3
Query: 648 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 469
K+ + L E ++ V+ SK+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPKM
Sbjct: 21 KLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 80
Query: 468 QVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQIPRL 289
+VC+LGD QH +EA+ + + M ASE++IKQIPRL
Sbjct: 81 KVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 140
Query: 288 LGPG 277
LGPG
Sbjct: 141 LGPG 144
Score = 93.5 bits (222), Expect = 1e-19
Identities = 40/69 (57%), Positives = 56/69 (81%)
Frame = -2
Query: 217 RLMKXKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHM 38
++ + K T+KFQ+KKVLC+ VAVG++ M ++ QN+ +S+NFLVSLLKK+WQNVR L++
Sbjct: 159 KVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYI 218
Query: 37 KSTMGPPQR 11
KSTMG P R
Sbjct: 219 KSTMGKPIR 227
>08_02_1568 +
27922338-27922342,27922839-27923058,27923369-27923519,
27923874-27924079,27924211-27924264
Length = 211
Score = 126 bits (305), Expect = 1e-29
Identities = 63/124 (50%), Positives = 79/124 (63%)
Frame = -3
Query: 648 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 469
K+ + L E ++ V+ K+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPKM
Sbjct: 3 KLQTEALKEAISQVVADCKEKNRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62
Query: 468 QVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQIPRL 289
+VC+LGD QH +EA+ + + M ASE++IKQIPRL
Sbjct: 63 KVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 122
Query: 288 LGPG 277
LGPG
Sbjct: 123 LGPG 126
Score = 94.3 bits (224), Expect = 9e-20
Identities = 40/69 (57%), Positives = 56/69 (81%)
Frame = -2
Query: 217 RLMKXKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHM 38
++ + K T+KFQ+KKVLC+ VAVG++ M ++ QN+ +S+NFLVSLLKK+WQNVR L++
Sbjct: 141 KVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYI 200
Query: 37 KSTMGPPQR 11
KSTMG P R
Sbjct: 201 KSTMGKPYR 209
>05_07_0079 -
27539389-27539892,27540059-27540343,27540453-27540550,
27540951-27541042,27541155-27541259,27541360-27541567,
27542469-27542472,27542742-27542765,27545025-27546266
Length = 853
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = -2
Query: 166 CLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 32
C + VG +DM ++ +NV ++ V + K W NVRSLH+K+
Sbjct: 195 CSGIKVGRLDMKEEDTVENVMAAVEAAVENVPKKWANVRSLHLKA 239
>04_04_0401 - 24946801-24947562
Length = 253
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = -2
Query: 193 IKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 32
++ +++ C +V VGH M +E +NV ++ + + + W+NVR+LH+K+
Sbjct: 143 VELRVEGGTCRAVRVGHAAMAREEAVENVVAAVEAAAACVPRKWRNVRALHVKA 196
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 35.5 bits (78), Expect = 0.042
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -3
Query: 600 SSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAK 424
S+ +KKRNF ETVE + L DP++ D+ G + L + ++V V + DEA+
Sbjct: 279 SANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPHGTGKTVRVAVFAEGPAADEAR 337
>05_03_0678 -
16871481-16871620,16871836-16871881,16872170-16872243,
16872495-16872552,16872640-16872702,16872891-16873012,
16873132-16873247,16873367-16873428,16873497-16873589,
16874061-16874138,16874248-16874423,16874500-16874550,
16874964-16875078
Length = 397
Score = 34.7 bits (76), Expect = 0.073
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = -3
Query: 675 GSLTNKMSXKVSRDTLYECVNAVLQSSKDKK-RNFLETVELQIGLKNYDPQKDKRFSGTV 499
G+ + +S + T +E + + LQS K K R +E + D + K + +
Sbjct: 242 GNRRSSISKEDVNATRWEQLKSTLQSGKHKGLRRCIEEIVFSYTYPRLDMEVSKHMNHLL 301
Query: 498 KLKYIPRPKM-QVCVLGDQQHCDEAKTLNVPCM 403
K + PK +VCV D +CD+ VP +
Sbjct: 302 KAPFCIHPKTGRVCVPIDPNNCDDFDPTTVPTL 334
>06_03_0049 +
15961706-15962017,15962952-15963851,15964769-15964913,
15964969-15965705
Length = 697
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +3
Query: 9 HLWGGPIVDFICNDRTFCQCFLSSDTRKLMERCTF*ASSSGVMSTWPTATERHNTFFIWN 188
H+W P + +C+D +C + + K++ERC + G S + T + F W
Sbjct: 37 HIWDEPYLYRVCSDGLLRRCVPTEEGLKIIERCHA-SPYGGHYSAFRTQAKIWQCGFFWP 95
Query: 189 LM 194
M
Sbjct: 96 TM 97
>02_05_1241 -
35189111-35189389,35189604-35189711,35189982-35190713,
35190811-35191230,35191484-35191565,35191719-35192002,
35193104-35193256
Length = 685
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -2
Query: 121 LAQNVHLSINFLVSLLKKH 65
+ + VHLS+NF++ L+KKH
Sbjct: 302 IVEGVHLSLNFVMGLMKKH 320
>06_03_0300 + 19299378-19299688,19299839-19300268
Length = 246
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 9 HLWGGPIVDFICNDRTFCQCFLSSDTRKLMERC 107
HLW P + +C+D +C + K++E+C
Sbjct: 53 HLWDAPYLYRVCSDGLLRRCVPVDEGMKIIEKC 85
>04_04_1049 +
30414545-30414596,30414732-30414853,30415121-30415198,
30415329-30415459,30415644-30417552,30417797-30417836,
30418194-30418259,30418583-30418734
Length = 849
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 215 SSASWTPGGREDQGNLPALFKPGPNKRGI 301
++ SW P + +GN P+ P P RGI
Sbjct: 489 NAPSWVPPPPQPRGNAPSCVPPPPQSRGI 517
>09_06_0364 +
22554082-22554225,22554306-22554520,22554671-22554752,
22554976-22555371,22555553-22556293,22556420-22556551,
22556981-22557367
Length = 698
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 139 DMTPDELAQNVHLSINFLVSLLKKH 65
D + + VHLS+NF++ L++KH
Sbjct: 262 DRKESVVVEGVHLSLNFVMGLMRKH 286
>06_03_0225 - 18413668-18413751,18414641-18415493,18417497-18417516
Length = 318
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +3
Query: 9 HLWGGPIVDFICNDRTFCQCFLSSDTRKLMERCTF*ASSSGVMSTWPTATERHNTFFIWN 188
HLW P + +C+D +C K++E+C A G + T + + F W
Sbjct: 125 HLWYAPYLYRVCSDGLLRRCVPVDKGMKIIEKCHA-APYGGHYGAFRTHAKIWQSGFFWP 183
Query: 189 LM 194
M
Sbjct: 184 TM 185
>03_02_0829 -
11599665-11600364,11600853-11601076,11601786-11602000,
11602300-11602377,11602593-11603907
Length = 843
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 501 QCRRNACPSVGHSSSDQFEALQSPKS 578
Q RN PS+ H +SD F + SP S
Sbjct: 81 QKSRNLSPSISHQASDSFSPVPSPLS 106
>03_02_0221 +
6533643-6533687,6533860-6533955,6535323-6535682,
6537106-6537177,6537374-6537697
Length = 298
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 468 AFSAAVCILALQCRRNACPSVGH 536
A A VCI L+CR+ CP H
Sbjct: 110 ASRAEVCIFCLRCRQVLCPRCSH 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,694,252
Number of Sequences: 37544
Number of extensions: 390289
Number of successful extensions: 947
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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