Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_L04
(512 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P20227 Cluster: TATA-box-binding protein; n=7; Eukaryot... 189 3e-47
UniRef50_P29037 Cluster: TATA-box-binding protein; n=168; Eukary... 174 9e-43
UniRef50_P20226 Cluster: TATA-box-binding protein; n=13; Bilater... 174 9e-43
UniRef50_Q5S251 Cluster: TATA-box-binding protein; n=1; Volvox c... 153 3e-36
UniRef50_Q6JAE2 Cluster: TATA-box-binding protein; n=2; Zea mays... 148 8e-35
UniRef50_A2Z7N4 Cluster: TATA-box-binding protein; n=1; Oryza sa... 144 1e-33
UniRef50_Q91YM5 Cluster: TATA-box-binding protein; n=15; Coeloma... 144 1e-33
UniRef50_Q5C0N4 Cluster: TATA-box-binding protein; n=1; Schistos... 117 1e-25
UniRef50_A7UFC2 Cluster: TBP-related factor; n=3; Entamoeba hist... 116 3e-25
UniRef50_A0CRU8 Cluster: Chromosome undetermined scaffold_25, wh... 115 6e-25
UniRef50_Q2H1M3 Cluster: Putative uncharacterized protein; n=1; ... 114 1e-24
UniRef50_Q59LW5 Cluster: Putative uncharacterized protein; n=1; ... 113 3e-24
UniRef50_Q00YA0 Cluster: TATA-box-binding protein; n=1; Ostreoco... 111 7e-24
UniRef50_P52653 Cluster: TATA-box-binding protein; n=3; Entamoeb... 111 7e-24
UniRef50_Q5CW12 Cluster: TATA-box factor binding protein; n=3; C... 107 1e-22
UniRef50_Q27896 Cluster: TBP-related factor; n=4; Diptera|Rep: T... 106 3e-22
UniRef50_Q3LVY6 Cluster: TATA binding protein of transcription f... 100 2e-20
UniRef50_Q4N840 Cluster: Transcription initiation factor TFIID, ... 95 1e-18
UniRef50_A7AVR8 Cluster: TATA-box binding protein; n=1; Babesia ... 90 2e-17
UniRef50_Q8ZVR0 Cluster: TATA-box-binding protein; n=15; Thermop... 89 4e-17
UniRef50_Q6BIC6 Cluster: Similarities with CA2369|CaTBP1 Candida... 87 2e-16
UniRef50_A2G4N7 Cluster: Putative uncharacterized protein; n=1; ... 84 2e-15
UniRef50_Q9YAT1 Cluster: TATA-box-binding protein; n=2; Desulfur... 82 8e-15
UniRef50_A2DQT7 Cluster: Putative uncharacterized protein; n=1; ... 81 1e-14
UniRef50_Q9V024 Cluster: TATA-box-binding protein; n=6; Thermoco... 80 3e-14
UniRef50_Q16II1 Cluster: Tata-box binding protein; n=2; Culicida... 80 3e-14
UniRef50_UPI00015BAE85 Cluster: TATA binding protein of transcri... 79 6e-14
UniRef50_A0RWZ0 Cluster: TATA-box binding protein (TBP), compone... 79 6e-14
UniRef50_P62380 Cluster: TATA box-binding protein-like protein 1... 79 8e-14
UniRef50_UPI00015B4A38 Cluster: PREDICTED: similar to tata-box b... 76 4e-13
UniRef50_Q07DP5 Cluster: TRF2; n=16; Coelomata|Rep: TRF2 - Droso... 76 5e-13
UniRef50_P32086 Cluster: TATA-box-binding protein; n=6; Plasmodi... 76 5e-13
UniRef50_UPI0000DA1BDD Cluster: PREDICTED: similar to TATA box-b... 75 1e-12
UniRef50_Q237D3 Cluster: TATA-box binding protein; n=1; Tetrahym... 75 1e-12
UniRef50_A7DPK8 Cluster: TATA-box binding; n=1; Candidatus Nitro... 73 4e-12
UniRef50_Q8TX38 Cluster: TATA-box-binding protein; n=1; Methanop... 73 4e-12
UniRef50_Q945B3 Cluster: TATA box-binding protein-like protein; ... 73 5e-12
UniRef50_Q9HN56 Cluster: TATA-box-binding protein E; n=11; Eurya... 72 7e-12
UniRef50_A0CM02 Cluster: Chromosome undetermined scaffold_21, wh... 72 9e-12
UniRef50_UPI00005882B9 Cluster: PREDICTED: similar to ENSANGP000... 69 6e-11
UniRef50_O52018 Cluster: TATA-box-binding protein D; n=26; Eurya... 67 2e-10
UniRef50_Q6M0L3 Cluster: TATA-box-binding protein; n=6; Methanoc... 66 6e-10
UniRef50_O51971 Cluster: TbpA; n=2; Halobacterium salinarum|Rep:... 64 2e-09
UniRef50_A4FXJ0 Cluster: TATA-box binding protein; n=1; Methanoc... 62 7e-09
UniRef50_Q8I9Q5 Cluster: TATA-binding protein-like factor; n=7; ... 59 7e-08
UniRef50_A3CUY3 Cluster: TATA-box binding protein; n=5; Methanom... 58 1e-07
UniRef50_Q9XZQ7 Cluster: TBP-like factor; n=3; Caenorhabditis|Re... 57 2e-07
UniRef50_Q9XZP5 Cluster: TBP-like factor; n=1; Brugia malayi|Rep... 54 1e-06
UniRef50_Q4QD71 Cluster: Transcription initiation factor-like pr... 49 5e-05
UniRef50_Q74N53 Cluster: NEQ039; n=1; Nanoarchaeum equitans|Rep:... 48 9e-05
UniRef50_O52004 Cluster: TATA-box-binding protein C; n=1; Haloba... 48 9e-05
UniRef50_O74045 Cluster: TATA-box-binding protein; n=2; Cenarcha... 47 3e-04
UniRef50_Q1ACW1 Cluster: TATA-box-binding protein; n=1; Phytopht... 44 0.002
UniRef50_A2T4N7 Cluster: TATA-box-binding protein; n=4; Euteleos... 42 0.011
UniRef50_Q6RUH3 Cluster: TATA-binding protein; n=1; Toxoplasma g... 36 0.72
UniRef50_A7SEE3 Cluster: Predicted protein; n=2; Nematostella ve... 33 2.9
UniRef50_A6SKR0 Cluster: Putative uncharacterized protein; n=2; ... 33 2.9
UniRef50_UPI0000D57506 Cluster: PREDICTED: similar to CG2990-PB,... 33 3.8
UniRef50_Q82V68 Cluster: Possible peroxidase, putative; n=2; Nit... 33 5.0
UniRef50_Q02CT2 Cluster: Proton-translocating NADH-quinone oxido... 33 5.0
UniRef50_A4B8E5 Cluster: Toxin secretion ABC transporter ATP-bin... 32 8.8
UniRef50_Q8N5M4 Cluster: Tetratricopeptide repeat protein 9C; n=... 32 8.8
>UniRef50_P20227 Cluster: TATA-box-binding protein; n=7;
Eukaryota|Rep: TATA-box-binding protein - Drosophila
melanogaster (Fruit fly)
Length = 353
Score = 189 bits (461), Expect = 3e-47
Identities = 93/102 (91%), Positives = 95/102 (93%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAVIMRIREP
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 221
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSE+DSRLAARKYARIIQK G K
Sbjct: 222 RTTALIFSSGKMVCTGAKSEDDSRLAARKYARIIQKLGFPAK 263
Score = 49.6 bits (113), Expect = 4e-05
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + Y P+ F +I R+ PR LIF SGK+V T
Sbjct: 268 KIQNMVGSCDVKFPIRLEGLVLTHCNFSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLT 327
Query: 84 GAKSEEDSRLAARKYARIIQK 22
GAK ++ A K I++K
Sbjct: 328 GAKVRQEIYDAFDKIFPILKK 348
>UniRef50_P29037 Cluster: TATA-box-binding protein; n=168;
Eukaryota|Rep: TATA-box-binding protein - Mus musculus
(Mouse)
Length = 316
Score = 174 bits (424), Expect = 9e-43
Identities = 85/102 (83%), Positives = 89/102 (87%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 125 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 184
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QK G K
Sbjct: 185 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAK 226
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 231 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 290
Query: 84 GAK 76
GAK
Sbjct: 291 GAK 293
>UniRef50_P20226 Cluster: TATA-box-binding protein; n=13;
Bilateria|Rep: TATA-box-binding protein - Homo sapiens
(Human)
Length = 339
Score = 174 bits (424), Expect = 9e-43
Identities = 85/102 (83%), Positives = 89/102 (87%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 207
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QK G K
Sbjct: 208 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAK 249
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 254 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 313
Query: 84 GAK 76
GAK
Sbjct: 314 GAK 316
>UniRef50_Q5S251 Cluster: TATA-box-binding protein; n=1; Volvox
carteri f. nagariensis|Rep: TATA-box-binding protein -
Volvox carteri f. nagariensis
Length = 340
Score = 153 bits (370), Expect = 3e-36
Identities = 71/86 (82%), Positives = 81/86 (94%)
Frame = -3
Query: 273 GILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 94
GI PQLQN+V+TVNL KLDLK+IA+HARNAEYNPKRFAAVIMRIREP+TTALIF+SGKM
Sbjct: 32 GITPQLQNVVATVNLGTKLDLKEIAMHARNAEYNPKRFAAVIMRIREPKTTALIFASGKM 91
Query: 93 VCTGAKSEEDSRLAARKYARIIQKXG 16
VCTGAKSE+DSR AAR+YA+I+QK G
Sbjct: 92 VCTGAKSEDDSRTAARRYAKIVQKLG 117
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QNIV + ++ + L+ +A H+ A Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 126 KIQNIVGSCDVKFPIRLEGLAYAHSLFASYEPELFPGLIYRMKQPKIVLLIFVSGKVVLT 185
Query: 84 GAKS 73
GAK+
Sbjct: 186 GAKT 189
>UniRef50_Q6JAE2 Cluster: TATA-box-binding protein; n=2; Zea
mays|Rep: TATA-box-binding protein - Zea mays (Maize)
Length = 392
Score = 148 bits (358), Expect = 8e-35
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = -3
Query: 255 QNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAK 76
+NIVSTVNLDCKLDLK IAL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMVCTGAK
Sbjct: 173 RNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 232
Query: 75 SEEDSRLAARKYARIIQKXGCTEK 4
SE+ S+LAARKYARIIQK G K
Sbjct: 233 SEQQSKLAARKYARIIQKLGFPAK 256
Score = 52.0 bits (119), Expect = 8e-06
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QNIV + ++ + L+ +A H + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 261 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT 320
Query: 84 GAKSEEDSRLA 52
GAK E++ A
Sbjct: 321 GAKVREETYTA 331
>UniRef50_A2Z7N4 Cluster: TATA-box-binding protein; n=1; Oryza
sativa (indica cultivar-group)|Rep: TATA-box-binding
protein - Oryza sativa subsp. indica (Rice)
Length = 264
Score = 144 bits (349), Expect = 1e-33
Identities = 72/100 (72%), Positives = 82/100 (82%)
Frame = -3
Query: 300 PLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTT 121
P+ + GI+P LQNIVSTVNLDC+LDLKKIAL ARNAEYNPKRFAAVIMRIR+P+TT
Sbjct: 35 PVDLVEHPSGIVPTLQNIVSTVNLDCRLDLKKIALQARNAEYNPKRFAAVIMRIRDPKTT 94
Query: 120 ALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEKL 1
ALIF+SGKMVCTGAKSE+ S+LAARK + C EKL
Sbjct: 95 ALIFASGKMVCTGAKSEDHSKLAARKERLLF--TSCREKL 132
Score = 49.6 bits (113), Expect = 4e-05
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QNIV + ++ + L+ +A H + Y P+ F +I R+++P+ LIF SGK+V T
Sbjct: 176 KIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLT 235
Query: 84 GAKSEED 64
GAK ++
Sbjct: 236 GAKYRKE 242
>UniRef50_Q91YM5 Cluster: TATA-box-binding protein; n=15;
Coelomata|Rep: TATA-box-binding protein - Mus musculus
(Mouse)
Length = 260
Score = 144 bits (348), Expect = 1e-33
Identities = 70/81 (86%), Positives = 72/81 (88%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 125 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 184
Query: 129 RTTALIFSSGKMVCTGAKSEE 67
RTTALIFSSGKMVCTGAKS E
Sbjct: 185 RTTALIFSSGKMVCTGAKSYE 205
Score = 39.1 bits (87), Expect = 0.058
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = -3
Query: 177 YNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAK 76
Y P+ F +I R+ +PR LIF SGK+V TGAK
Sbjct: 204 YEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAK 237
>UniRef50_Q5C0N4 Cluster: TATA-box-binding protein; n=1; Schistosoma
japonicum|Rep: TATA-box-binding protein - Schistosoma
japonicum (Blood fluke)
Length = 227
Score = 117 bits (282), Expect = 1e-25
Identities = 55/104 (52%), Positives = 75/104 (72%), Gaps = 5/104 (4%)
Frame = -3
Query: 312 APMTPLTPLSADPGIL-----PQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVI 148
AP P+ P S +L P + N+VSTV+L C ++L+K+ LH R+AEYNP+RF V+
Sbjct: 30 APQRPVGPDSDSLDLLCGIRKPVIHNMVSTVDLGCPIELRKLVLHVRSAEYNPRRFPGVV 89
Query: 147 MRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXG 16
+R+REPR T L+F +G+MVCTGA+SE D+ L +RK ARIIQK G
Sbjct: 90 IRLREPRVTCLVFGTGRMVCTGARSEADANLGSRKCARIIQKLG 133
Score = 50.0 bits (114), Expect = 3e-05
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
+QN+V +L + L+ + L + + +Y P+ F A+I RI +PR LIF +GK+V TG
Sbjct: 143 IQNMVGLADLRFPVRLEGVQLANEQMTQYEPEIFPALIYRIIKPRLVMLIFVNGKVVMTG 202
Query: 81 AKSEE 67
AKS E
Sbjct: 203 AKSRE 207
>UniRef50_A7UFC2 Cluster: TBP-related factor; n=3; Entamoeba
histolytica|Rep: TBP-related factor - Entamoeba
histolytica
Length = 216
Score = 116 bits (279), Expect = 3e-25
Identities = 55/109 (50%), Positives = 75/109 (68%)
Frame = -3
Query: 330 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 151
+S + P+ P+ + P +QNIV+TV LDC ++L+ + RNAEYNPKRF A+
Sbjct: 17 ISSNNNKPIIKQLPVPTNEIEKPVIQNIVATVELDCTINLQDVVRRVRNAEYNPKRFGAL 76
Query: 150 IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
I+RI P+TTAL+F SGK+V TG K+ +DSRLA RKYARI+Q+ G K
Sbjct: 77 IIRITNPKTTALVFHSGKLVVTGGKTVDDSRLAGRKYARILQRLGYNVK 125
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKK-IALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V++ ++ + LK+ I L + +Y P+ F V+ R+ +P+ LIF+SGK+V T
Sbjct: 130 KIQNVVASCDMKFAISLKELIQLAPKITKYEPEIFPGVVYRLADPKMVLLIFASGKIVFT 189
Query: 84 GAKSEEDSRLAARKYARII 28
G K E A + +I+
Sbjct: 190 GGKEIEQINKAFSEIYKIL 208
>UniRef50_A0CRU8 Cluster: Chromosome undetermined scaffold_25, whole
genome shotgun sequence; n=2; Eukaryota|Rep: Chromosome
undetermined scaffold_25, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 201
Score = 115 bits (277), Expect = 6e-25
Identities = 56/83 (67%), Positives = 68/83 (81%)
Frame = -3
Query: 264 PQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
P++QN+VSTV+L +L+L I+ AR AEYNPKRF+AVIMR+ P TTALIF SGKMVCT
Sbjct: 25 PKIQNVVSTVDLGTELNLVVISNGARMAEYNPKRFSAVIMRLSNPSTTALIFQSGKMVCT 84
Query: 84 GAKSEEDSRLAARKYARIIQKXG 16
GAKSE+ S +AARKYA+II K G
Sbjct: 85 GAKSEDQSLIAARKYAKIINKLG 107
Score = 32.7 bits (71), Expect = 5.0
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -3
Query: 180 EYNPKRFAAVIMR--IREPRTTALIFSSGKMVCTGAKSEED 64
+Y P+ F +I R + + T LIF SG+ V TG K ED
Sbjct: 139 QYEPEIFPGLIFRKITDQKKITLLIFVSGRCVITGGKKTED 179
>UniRef50_Q2H1M3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 242
Score = 114 bits (274), Expect = 1e-24
Identities = 54/83 (65%), Positives = 69/83 (83%)
Frame = -3
Query: 264 PQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
P +QN+V+TV+L C+LDL+ I+ ARN EYN ++F A+IMRIREPRTT L+FSSGKMV T
Sbjct: 35 PIIQNVVATVDLGCRLDLRLISEQARNVEYNRRKFHALIMRIREPRTTTLVFSSGKMVIT 94
Query: 84 GAKSEEDSRLAARKYARIIQKXG 16
GAKSE ++LAARK+AR +QK G
Sbjct: 95 GAKSEALAKLAARKHARALQKCG 117
Score = 51.6 bits (118), Expect = 1e-05
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIA-LHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN V + D + L++IA ++ +A Y P+ F ++ + P+ L+FS+GK+V T
Sbjct: 126 KVQNYVGSATCDFLIRLERIAHMYRESAMYEPELFPGLVYTMLRPKLKCLVFSTGKIVLT 185
Query: 84 GAKSEEDSRLA-ARKYARIIQ 25
GAK+ ED + A A Y +++
Sbjct: 186 GAKAVEDIQEAFANLYPLLLE 206
>UniRef50_Q59LW5 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 148
Score = 113 bits (271), Expect = 3e-24
Identities = 58/82 (70%), Positives = 63/82 (76%)
Frame = +2
Query: 29 IILAYFLAAKRESSSLLAPVQTILPDEKIKAVVLGSLILIITAAKRLGLYSALRACNAIF 208
+ILAYFL A ESSS LAPV TI P+ KI AVV GSLILIITAAKR GLYSA AC AI
Sbjct: 1 MILAYFLEANLESSSDLAPVTTIFPEAKINAVVFGSLILIITAAKRFGLYSAFLACKAIV 60
Query: 209 FKSNLQSRFTVETMFCNCGKIP 274
+S+ QSRFTV T+FCN G IP
Sbjct: 61 LRSSRQSRFTVATIFCNVGTIP 82
>UniRef50_Q00YA0 Cluster: TATA-box-binding protein; n=1;
Ostreococcus tauri|Rep: TATA-box-binding protein -
Ostreococcus tauri
Length = 258
Score = 111 bits (268), Expect = 7e-24
Identities = 63/101 (62%), Positives = 70/101 (69%), Gaps = 21/101 (20%)
Frame = -3
Query: 255 QNIVSTVNLDCKLDLKKIALHARNAEYNPK---------------------RFAAVIMRI 139
+NIV+TVNLDCKLDLK IA HARN EYNPK RFAA IMRI
Sbjct: 50 RNIVATVNLDCKLDLKTIAFHARNVEYNPKVRRATRAPTLGEPTRRDENDFRFAAAIMRI 109
Query: 138 REPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXG 16
R P+TTALIFSSGKMVCTGAK+E +R AARKYA++I K G
Sbjct: 110 RNPKTTALIFSSGKMVCTGAKTEALAREAARKYAKVIIKLG 150
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ +A H A+Y P+ F +I R++ P+ LIF SGK+V T
Sbjct: 159 KIQNMVGSCDVQFPIRLEGLAWQHGHFAQYEPELFPGLIYRMQMPKIVLLIFVSGKIVLT 218
Query: 84 GAKSEED 64
G K ED
Sbjct: 219 GGKRRED 225
>UniRef50_P52653 Cluster: TATA-box-binding protein; n=3; Entamoeba
histolytica|Rep: TATA-box-binding protein - Entamoeba
histolytica
Length = 234
Score = 111 bits (268), Expect = 7e-24
Identities = 50/83 (60%), Positives = 67/83 (80%)
Frame = -3
Query: 264 PQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
P++ N+VST L KL+L+KI ARNAEYNPKRFA IMRI P++TALIF +GK+VCT
Sbjct: 54 PEIVNVVSTFQLGVKLELRKIVQKARNAEYNPKRFAGAIMRISSPKSTALIFQTGKIVCT 113
Query: 84 GAKSEEDSRLAARKYARIIQKXG 16
G +S E+S++A++KYA+II+K G
Sbjct: 114 GTRSIEESKIASKKYAKIIKKIG 136
Score = 52.8 bits (121), Expect = 4e-06
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIA-LHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
+QNIV + ++ ++ L+ + + +Y P+ F ++ R+ P+ T L+FS+GK+V TG
Sbjct: 146 VQNIVGSCDVKFQIALRTLVDSYLAFCQYEPEVFPGLVYRMASPKVTLLVFSTGKVVLTG 205
Query: 81 AKSEEDSRLAARKYARII 28
AK EE LA + I+
Sbjct: 206 AKDEESLNLAYKNIYPIL 223
>UniRef50_Q5CW12 Cluster: TATA-box factor binding protein; n=3;
Cryptosporidium|Rep: TATA-box factor binding protein -
Cryptosporidium parvum Iowa II
Length = 249
Score = 107 bits (257), Expect = 1e-22
Identities = 45/85 (52%), Positives = 68/85 (80%)
Frame = -3
Query: 270 ILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 91
I P++QNI+++V+L C+LDL+ IA+ ARNAEYNPK+ AV+MR+R+P+ T L+F SG+++
Sbjct: 68 ITPEIQNIIASVHLQCELDLRMIAISARNAEYNPKKVNAVVMRLRDPKCTGLLFRSGRLM 127
Query: 90 CTGAKSEEDSRLAARKYARIIQKXG 16
TGA+ E D++L +K A+I QK G
Sbjct: 128 ITGARLENDAKLGGKKMAKICQKSG 152
Score = 33.9 bits (74), Expect = 2.2
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIALHARN-AEYNPKRFAAVIMRIREP----RTTALIFSSGK 97
+++NI++T + + L+ +A R+ Y P+ F ++ R + L+F SGK
Sbjct: 162 KMENIIATADCKFPIRLEGLAYDHRDFCNYEPELFPGLVYRYHPDNSPTKAVLLLFVSGK 221
Query: 96 MVCTGAKSEED 64
++ TG K+ ++
Sbjct: 222 VIVTGCKNYQE 232
>UniRef50_Q27896 Cluster: TBP-related factor; n=4; Diptera|Rep:
TBP-related factor - Drosophila melanogaster (Fruit fly)
Length = 224
Score = 106 bits (254), Expect = 3e-22
Identities = 52/115 (45%), Positives = 77/115 (66%)
Frame = -3
Query: 360 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNA 181
A N ++ + P+ + P A I +LQNIV+T +++C+LDLK I RN+
Sbjct: 19 ATSNAAANPHAALQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRTRNS 76
Query: 180 EYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXG 16
EY+PKRF VIMR+ PR TALIF +GK++CTGA++E ++ + +RK+ARI+QK G
Sbjct: 77 EYSPKRFRGVIMRMHSPRCTALIFRTGKVICTGARNEIEADIGSRKFARILQKLG 131
Score = 56.8 bits (131), Expect = 3e-07
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIA-LHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
+LQNIV+TV+L + L+ + +H + + Y P+ F +I R+ +PR LIF +GK+V T
Sbjct: 140 KLQNIVATVDLRFPIRLENLNHVHGQFSSYEPEMFPGLIYRMVKPRIVLLIFVNGKVVFT 199
Query: 84 GAKSEED 64
GAKS +D
Sbjct: 200 GAKSRKD 206
>UniRef50_Q3LVY6 Cluster: TATA binding protein of transcription
factor IID; n=1; Bigelowiella natans|Rep: TATA binding
protein of transcription factor IID - Bigelowiella
natans (Pedinomonas minutissima) (Chlorarachnion
sp.(strain CCMP 621))
Length = 204
Score = 100 bits (239), Expect = 2e-20
Identities = 44/85 (51%), Positives = 63/85 (74%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
++ N+V +V LD LDLKKIAL ++N E+N KRF +IMR R+P+ TA++F SG M+CTG
Sbjct: 19 KIHNVVLSVRLDSILDLKKIALRSKNTEFNSKRFHGLIMRSRDPKATAIVFKSGSMICTG 78
Query: 81 AKSEEDSRLAARKYARIIQKXGCTE 7
AKSE+D + A K+ +II+ G T+
Sbjct: 79 AKSEKDGKEAILKFVKIIRNAGFTD 103
>UniRef50_Q4N840 Cluster: Transcription initiation factor TFIID,
putative; n=2; Theileria|Rep: Transcription initiation
factor TFIID, putative - Theileria parva
Length = 222
Score = 94.7 bits (225), Expect = 1e-18
Identities = 42/99 (42%), Positives = 73/99 (73%)
Frame = -3
Query: 318 SPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRI 139
+P + L L + +P +QNIV++V+L +LDL++IA+ RNAEYNPK+F A+++R+
Sbjct: 26 NPQVLNKLQQLPFNNMNVPMVQNIVASVHLGEELDLREIAISTRNAEYNPKKFNALVLRM 85
Query: 138 REPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQK 22
+ P+ T LIF +G+++ TG+K+ ED+RL ++ A++I+K
Sbjct: 86 QNPKCTGLIFRTGRIIITGSKTIEDTRLGGKRMAKMIRK 124
>UniRef50_A7AVR8 Cluster: TATA-box binding protein; n=1; Babesia
bovis|Rep: TATA-box binding protein - Babesia bovis
Length = 277
Score = 90.2 bits (214), Expect = 2e-17
Identities = 36/81 (44%), Positives = 65/81 (80%)
Frame = -3
Query: 264 PQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
P +QNIV++V+L ++DL++IA+ RNAEYNP++F A+I+R++ PR T L+F +G+++ T
Sbjct: 99 PVVQNIVASVHLGNEIDLREIAISTRNAEYNPRKFNALILRMQNPRCTGLVFRTGRLIVT 158
Query: 84 GAKSEEDSRLAARKYARIIQK 22
G K+ E +RL A++ A+++++
Sbjct: 159 GCKTVESARLGAKRIAKMVRR 179
>UniRef50_Q8ZVR0 Cluster: TATA-box-binding protein; n=15;
Thermoprotei|Rep: TATA-box-binding protein - Pyrobaculum
aerophilum
Length = 199
Score = 89.4 bits (212), Expect = 4e-17
Identities = 40/82 (48%), Positives = 61/82 (74%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
+++NIV+TVNL +LDL+++A AEYNP +F +I+R+ +PR +ALIF +GKMVCTG
Sbjct: 9 RIENIVATVNLGVELDLEQLAERLTMAEYNPDQFPGLILRLTKPRISALIFRTGKMVCTG 68
Query: 81 AKSEEDSRLAARKYARIIQKXG 16
AK+EED + A R ++++ G
Sbjct: 69 AKNEEDLKNAVRALVKLLKDHG 90
Score = 79.0 bits (186), Expect = 6e-14
Identities = 39/88 (44%), Positives = 57/88 (64%)
Frame = -3
Query: 279 DPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSG 100
DP + Q+QNIV++ NL ++DL++ L NA Y P++F +I R+ PR LIF SG
Sbjct: 96 DPEV--QIQNIVASGNLHAEVDLEQAVLMLENAMYEPEQFPGLIYRMSSPRVVILIFGSG 153
Query: 99 KMVCTGAKSEEDSRLAARKYARIIQKXG 16
K+VCTGAKSE+D A +K +++ G
Sbjct: 154 KIVCTGAKSEKDVATAVQKLYNQLKELG 181
>UniRef50_Q6BIC6 Cluster: Similarities with CA2369|CaTBP1 Candida
albicans CaTBP1; n=1; Debaryomyces hansenii|Rep:
Similarities with CA2369|CaTBP1 Candida albicans CaTBP1
- Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 120
Score = 87.4 bits (207), Expect = 2e-16
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = -3
Query: 282 ADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIF 109
A GI+P LQNIV+TVNLDC+LDLK IALHAR+AEYNPKR VIMRIRE + LIF
Sbjct: 62 ATSGIVPTLQNIVATVNLDCRLDLKTIALHARDAEYNPKRLEDVIMRIRENKNKELIF 119
>UniRef50_A2G4N7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 233
Score = 84.2 bits (199), Expect = 2e-15
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = -3
Query: 264 PQLQNIVSTVNLDC-KLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 88
P++ N+++ C KL+L IA RNAEY PKR AV++RIR+P+ T L+FS+GK+
Sbjct: 49 PKVVNVIALAQYSCNKLNLVSIASTIRNAEYKPKRIKAVVIRIRDPKATGLVFSNGKINI 108
Query: 87 TGAKSEEDSRLAARKYARIIQKXGCTEKL 1
G +S ED++ AA K+ +++Q+ G KL
Sbjct: 109 VGCRSVEDAKRAAHKFRKMLQQIGYDVKL 137
Score = 50.8 bits (116), Expect = 2e-05
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIAL---HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 88
+ +IV+T++ + + +IA H +Y P++FA +I R+ +P+ T LIF SG +V
Sbjct: 142 ISSIVATIHTPFNIAIAQIASADGHKLFCQYRPEKFAGLIYRLTDPQCTMLIFQSGSIVL 201
Query: 87 TGAKSEEDSRLAARKYARIIQK 22
T AKSE+D + ++QK
Sbjct: 202 T-AKSEDDLTAGSNWIYPVLQK 222
>UniRef50_Q9YAT1 Cluster: TATA-box-binding protein; n=2;
Desulfurococcales|Rep: TATA-box-binding protein -
Aeropyrum pernix
Length = 203
Score = 81.8 bits (193), Expect = 8e-15
Identities = 43/90 (47%), Positives = 59/90 (65%)
Frame = -3
Query: 291 PLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALI 112
P+S P I Q+QNIV++ NL +DL+K AL N+ Y P++F +I R+ EPR LI
Sbjct: 107 PISGKPQI--QIQNIVASANLKVYIDLEKAALEFENSLYEPEQFPGLIYRMDEPRVVMLI 164
Query: 111 FSSGKMVCTGAKSEEDSRLAARKYARIIQK 22
FSSGKMV TGAK E + A +K AR +++
Sbjct: 165 FSSGKMVITGAKMENEVYDAVKKVARKLKE 194
Score = 68.1 bits (159), Expect = 1e-10
Identities = 31/63 (49%), Positives = 44/63 (69%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
+++NIV+TV L+ +LDL I ++ +YNP +F ++ R+ PR T LIF SGKMV TG
Sbjct: 24 KIENIVATVILENQLDLNLIETKIQDVDYNPDQFPGLVYRLESPRVTVLIFKSGKMVITG 83
Query: 81 AKS 73
AKS
Sbjct: 84 AKS 86
>UniRef50_A2DQT7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 235
Score = 81.4 bits (192), Expect = 1e-14
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 6/114 (5%)
Frame = -3
Query: 339 QQMLSQASPAPMTPLTPLSADPGI------LPQLQNIVSTVNLDCKLDLKKIALHARNAE 178
+Q++ +A +TP S I +P++ NIV+ V+ CKLDL KI RN+E
Sbjct: 21 EQLVKEAQEESEEEITPESIQRNISLNQPPIPKVVNIVACVDYGCKLDLLKITSSTRNSE 80
Query: 177 YNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXG 16
YNP RF A +R +EP+ TAL F +GK+ G KS + + AAR + R+ + G
Sbjct: 81 YNPIRFPAATLRNKEPKATALAFKNGKVNIVGCKSADIALKAARCFGRLFKNIG 134
Score = 61.7 bits (143), Expect = 1e-08
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIAL---HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 88
+ N+V+T++ + L+ IA H + A YNP+ +A +I R+ P+TT +I+ SGK++
Sbjct: 145 IANMVATMDCKFPIHLESIASSPGHIKFATYNPEIYAGLIYRLASPKTTLMIYVSGKIII 204
Query: 87 TGAKSEEDSRLAARKYARIIQKXGCTE 7
TGAKSEE+ + A+ I++ TE
Sbjct: 205 TGAKSEEELKAASAFIYPILRLFASTE 231
>UniRef50_Q9V024 Cluster: TATA-box-binding protein; n=6;
Thermococcaceae|Rep: TATA-box-binding protein -
Pyrococcus abyssi
Length = 191
Score = 80.2 bits (189), Expect = 3e-14
Identities = 38/88 (43%), Positives = 58/88 (65%)
Frame = -3
Query: 267 LPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 88
L +QN+V + ++ + +L +AL N EY P++F VI R+++PR L+FSSGK+VC
Sbjct: 99 LIDIQNMVFSGDIGREFNLDNVALTLPNCEYEPEQFPGVIYRVKDPRAVILLFSSGKIVC 158
Query: 87 TGAKSEEDSRLAARKYARIIQKXGCTEK 4
+GAKSE D+ A RK R ++K G E+
Sbjct: 159 SGAKSEADAWEAVRKLLRELEKYGLIEE 186
Score = 70.1 bits (164), Expect = 3e-11
Identities = 35/80 (43%), Positives = 54/80 (67%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
+++NIV++V+L +LDL+K+ N++YNP+ F +I R +P+ LIFSSGK+V TG
Sbjct: 10 RIENIVASVDLFAQLDLEKVLDICPNSKYNPEEFPGIICRFDDPKVALLIFSSGKLVVTG 69
Query: 81 AKSEEDSRLAARKYARIIQK 22
AKS D R A++I+K
Sbjct: 70 AKSIHD---IERAVAKLIEK 86
>UniRef50_Q16II1 Cluster: Tata-box binding protein; n=2;
Culicidae|Rep: Tata-box binding protein - Aedes aegypti
(Yellowfever mosquito)
Length = 584
Score = 79.8 bits (188), Expect = 3e-14
Identities = 39/89 (43%), Positives = 60/89 (67%)
Frame = -3
Query: 282 ADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSS 103
A+P I + N+V + ++ C L+L+ IAL N E+ + V M++R P TTA I+SS
Sbjct: 283 AEPEIDIVINNVVCSFSVRCHLNLRDIALKGFNVEFRREN-GMVTMKLRRPYTTASIWSS 341
Query: 102 GKMVCTGAKSEEDSRLAARKYARIIQKXG 16
GK+ CTGA SE+ +++AAR+Y+R +QK G
Sbjct: 342 GKITCTGATSEDQAKVAARRYSRCLQKLG 370
>UniRef50_UPI00015BAE85 Cluster: TATA binding protein of
transcription factor TFIID; n=1; Ignicoccus hospitalis
KIN4/I|Rep: TATA binding protein of transcription factor
TFIID - Ignicoccus hospitalis KIN4/I
Length = 207
Score = 79.0 bits (186), Expect = 6e-14
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = -3
Query: 282 ADPGILPQLQNIVSTVNLDCKLDLKKIALHA-RNAEYNPKRFAAVIMRIREPRTTALIFS 106
A P I +++NIV+TV++D +DL+KI N EY+P +F +I R+ EPR TALIF
Sbjct: 7 AKPSI--KIENIVATVSIDQNIDLEKIEKEFDSNVEYDPDQFPGLIFRLEEPRVTALIFK 64
Query: 105 SGKMVCTGAKSEEDSRLAARKYARIIQKXG 16
SGKMV TGAKS ++ A +K I++ G
Sbjct: 65 SGKMVVTGAKSTQELITAVKKIFYILKSKG 94
Score = 78.2 bits (184), Expect = 1e-13
Identities = 37/83 (44%), Positives = 54/83 (65%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
Q+QNIV++ NL ++ L+K A N+ Y P++F +I R+ EPR L+FSSGKMV TG
Sbjct: 105 QIQNIVASANLGVEVHLEKAAYLLENSMYEPEQFPGLIYRLDEPRVVLLLFSSGKMVVTG 164
Query: 81 AKSEEDSRLAARKYARIIQKXGC 13
AK EE+ A K + +++ GC
Sbjct: 165 AKKEEEVSKAVEKVFQNLKEKGC 187
>UniRef50_A0RWZ0 Cluster: TATA-box binding protein (TBP), component
of TFIID and TFIIIB; n=4; Thermoprotei|Rep: TATA-box
binding protein (TBP), component of TFIID and TFIIIB -
Cenarchaeum symbiosum
Length = 186
Score = 79.0 bits (186), Expect = 6e-14
Identities = 34/85 (40%), Positives = 58/85 (68%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
++N+V++ ++D K+DL +I + EY+P +F ++ R++ P+T LIF+SGKMVCTG+
Sbjct: 10 VENVVASASVDQKMDLNEITRTFPDVEYHPDQFPGLVFRLKSPKTATLIFTSGKMVCTGS 69
Query: 78 KSEEDSRLAARKYARIIQKXGCTEK 4
KSEE +R A + + ++K G K
Sbjct: 70 KSEEMARKAVKTVVQKLRKGGIKVK 94
Score = 68.5 bits (160), Expect = 8e-11
Identities = 30/66 (45%), Positives = 47/66 (71%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
++QNIV+++NL K+ L++ A + Y P++F +I R+ +P+T L+FSSGK+VCTG
Sbjct: 100 EIQNIVASINLGGKIHLEQAARTLPRSMYEPEQFPGLIHRMLDPKTVILLFSSGKLVCTG 159
Query: 81 AKSEED 64
AK E D
Sbjct: 160 AKKEPD 165
>UniRef50_P62380 Cluster: TATA box-binding protein-like protein 1;
n=23; Tetrapoda|Rep: TATA box-binding protein-like
protein 1 - Homo sapiens (Human)
Length = 186
Score = 78.6 bits (185), Expect = 8e-14
Identities = 37/81 (45%), Positives = 54/81 (66%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SEE+++ AR+ AR +QK G
Sbjct: 72 TSEEEAKFGARRLARSLQKLG 92
Score = 36.3 bits (80), Expect = 0.41
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 252 NIVSTVNLDCKLDLKKIALHAR-NAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
N+++ N+ ++ L + + R +A Y P+ AV RI+ R T IFS+G + TG
Sbjct: 104 NVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTG 161
>UniRef50_UPI00015B4A38 Cluster: PREDICTED: similar to tata-box
binding protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to tata-box binding protein - Nasonia
vitripennis
Length = 283
Score = 76.2 bits (179), Expect = 4e-13
Identities = 38/81 (46%), Positives = 56/81 (69%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V + ++ C L+L++IAL+ N EY + V MR+R+P T A I SSGK+ CTGA
Sbjct: 63 ISNVVCSFSVRCHLNLREIALNGSNVEYRREN-GLVRMRLRKPCTLASISSSGKVTCTGA 121
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SEE+++ AAR+ AR +QK G
Sbjct: 122 TSEEEAKKAARRCARSLQKLG 142
>UniRef50_Q07DP5 Cluster: TRF2; n=16; Coelomata|Rep: TRF2 - Drosophila
melanogaster (Fruit fly)
Length = 1715
Score = 75.8 bits (178), Expect = 5e-13
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V + ++ C L L++IAL N EY + V M++R P TTA I+SSG++ CTGA
Sbjct: 1287 INNVVCSFSVGCHLKLREIALQGSNVEYRREN-GMVTMKLRHPYTTASIWSSGRITCTGA 1345
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SE +++AAR+YAR + K G
Sbjct: 1346 TSESMAKVAARRYARCLGKLG 1366
Score = 32.7 bits (71), Expect = 5.0
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIA-LHARNAEYNPKRFAAVIMRIR--EPRTTALIFSSGKMV 91
++ N++ T ++ + + + H NA Y P+ V ++R +P+ T IFS+G +
Sbjct: 1375 RIVNVLGTCSMPWAIKIVNFSERHRENASYEPELHPGVTYKMRDPDPKATLKIFSTGSVT 1434
Query: 90 CTGA 79
T A
Sbjct: 1435 VTAA 1438
>UniRef50_P32086 Cluster: TATA-box-binding protein; n=6;
Plasmodium|Rep: TATA-box-binding protein - Plasmodium
falciparum
Length = 228
Score = 75.8 bits (178), Expect = 5e-13
Identities = 31/78 (39%), Positives = 57/78 (73%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ NI+S+ NL ++L+ +A+ RNAEYNP + +I+R+ +P+ TALIF +G+++ TG
Sbjct: 52 IHNIISSANLCIDINLRLVAVSIRNAEYNPSKINTLIIRLNKPQCTALIFKNGRIMLTGT 111
Query: 78 KSEEDSRLAARKYARIIQ 25
++++DS + +K A+II+
Sbjct: 112 RTKKDSIMGCKKIAKIIK 129
Score = 40.7 bits (91), Expect = 0.019
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREP---RTTALIFSSGKM 94
+++NI+++ N + + L+ +A H Y P+ FA ++ R + ++ LIF SGK+
Sbjct: 142 KIENIIASANCNIPIRLEVLAHDHKEYCNYEPELFAGLVYRYKPTSNLKSVILIFVSGKI 201
Query: 93 VCTGAKS 73
+ TG KS
Sbjct: 202 IITGCKS 208
>UniRef50_UPI0000DA1BDD Cluster: PREDICTED: similar to TATA
box-binding protein-like protein 1 (TBP-like protein 1)
(TATA box-binding protein-related factor 2) (TBP-related
factor 2) (21-kDa TBP-like protein); n=2; Rattus
norvegicus|Rep: PREDICTED: similar to TATA box-binding
protein-like protein 1 (TBP-like protein 1) (TATA
box-binding protein-related factor 2) (TBP-related
factor 2) (21-kDa TBP-like protein) - Rattus norvegicus
Length = 363
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/70 (50%), Positives = 50/70 (71%)
Frame = -3
Query: 225 CKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAAR 46
C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA SEE+++ AR
Sbjct: 167 CHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGATSEEEAKFGAR 225
Query: 45 KYARIIQKXG 16
+ AR +QK G
Sbjct: 226 RLARSLQKLG 235
Score = 36.3 bits (80), Expect = 0.41
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 252 NIVSTVNLDCKLDLKKIALHAR-NAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
N+++ N+ ++ L + + R +A Y P+ AV RI+ R T IFS+G + TG
Sbjct: 247 NVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTG 304
>UniRef50_Q237D3 Cluster: TATA-box binding protein; n=1; Tetrahymena
thermophila SB210|Rep: TATA-box binding protein -
Tetrahymena thermophila SB210
Length = 231
Score = 74.5 bits (175), Expect = 1e-12
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 10/91 (10%)
Frame = -3
Query: 264 PQLQNIVSTVNLDCK----------LDLKKIALHARNAEYNPKRFAAVIMRIREPRTTAL 115
P++QN+V+T+ + + DL++IA RN +YNPKRF AV MRI++P+ T L
Sbjct: 14 PKIQNVVATIKMIRQDGNSSKQKQTFDLQEIAQKCRNTQYNPKRFPAVFMRIKDPKATGL 73
Query: 114 IFSSGKMVCTGAKSEEDSRLAARKYARIIQK 22
I+SSG M G +S +S+ AA + II+K
Sbjct: 74 IYSSGNMTIVGTRSTNESQTAAERIFGIIKK 104
Score = 35.9 bits (79), Expect = 0.54
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = -3
Query: 120 ALIFSSGKMVCTGAKSEEDSRLAARK 43
AL+F+SGKMV TGAKS+ED + A K
Sbjct: 175 ALVFASGKMVFTGAKSQEDIQQAYDK 200
>UniRef50_A7DPK8 Cluster: TATA-box binding; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: TATA-box binding -
Candidatus Nitrosopumilus maritimus SCM1
Length = 187
Score = 72.9 bits (171), Expect = 4e-12
Identities = 33/79 (41%), Positives = 54/79 (68%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
++N+V++ ++D K+DL +I + EY+P++F ++ R+ PRT LIF +GKMVCTGA
Sbjct: 10 VENVVASASVDQKIDLNEITEKFPDTEYHPEQFPGLVFRLSTPRTATLIFRTGKMVCTGA 69
Query: 78 KSEEDSRLAARKYARIIQK 22
KSEE +A + ++QK
Sbjct: 70 KSEE---MAIKAVNTVVQK 85
Score = 67.7 bits (158), Expect = 1e-10
Identities = 30/65 (46%), Positives = 45/65 (69%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+QNIV+ +NL K+ L+K A + Y P++F +I R+ +P+T L+F+SGK+VCTGA
Sbjct: 101 VQNIVAAINLGGKIHLEKAARTLPRSMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGA 160
Query: 78 KSEED 64
K E D
Sbjct: 161 KKESD 165
>UniRef50_Q8TX38 Cluster: TATA-box-binding protein; n=1;
Methanopyrus kandleri|Rep: TATA-box-binding protein -
Methanopyrus kandleri
Length = 185
Score = 72.9 bits (171), Expect = 4e-12
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL------HARNAEYNPKRFAAVIMRIREPRTTALIFSSG 100
++QNIV++++ LDL IA EY P++F +++R+REP+ L+F SG
Sbjct: 93 EIQNIVASIDFHVPLDLDTIAEVLVGDEDVEGIEYEPEQFPGLVLRLREPKVAMLLFYSG 152
Query: 99 KMVCTGAKSEEDSRLAARKYARIIQKXG 16
K VCTGAK+EE+ A +K A I+K G
Sbjct: 153 KAVCTGAKTEEEPEKAVKKIAEKIEKYG 180
Score = 58.4 bits (135), Expect = 9e-08
Identities = 28/80 (35%), Positives = 51/80 (63%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
++QNIV++V+L +++L + ++ + EY P++F ++ R+ + T LIF SGKMVCTG
Sbjct: 2 EIQNIVASVDLKGEVNLDECSVILQG-EYEPEQFPGLVYRLEDIGTVVLIFRSGKMVCTG 60
Query: 81 AKSEEDSRLAARKYARIIQK 22
AK+ E + + ++K
Sbjct: 61 AKNREQIYKSVERVREDLEK 80
>UniRef50_Q945B3 Cluster: TATA box-binding protein-like protein;
n=1; Crypthecodinium cohnii|Rep: TATA box-binding
protein-like protein - Crypthecodinium cohnii
(Dinoflagellate)
Length = 220
Score = 72.5 bits (170), Expect = 5e-12
Identities = 30/78 (38%), Positives = 56/78 (71%)
Frame = -3
Query: 249 IVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSE 70
I++ NL C++DL+++A R+AEYNP++ +++ +R+ EPR TA++ SSG + TG
Sbjct: 48 IMAKFNLRCEIDLRQLAFALRHAEYNPRKHSSLTLRLVEPRATAMVRSSGVVSITGVLDL 107
Query: 69 EDSRLAARKYARIIQKXG 16
++ + +A+K AR++Q+ G
Sbjct: 108 DELKQSAKKVARLVQRSG 125
Score = 38.7 bits (86), Expect = 0.077
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = -3
Query: 252 NIVSTVNLDCKLDLKKIALH-ARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAK 76
+I++ ++ + L ++A RNA Y P+ + I R P+ T L+ S GK++ +G +
Sbjct: 140 SILAKASMGFPIRLDQLAAKWRRNALYEPELYCGCIFRTTRPKCTYLLTSGGKVMISGFR 199
Query: 75 SEEDSRLAARKYARII 28
+ ED A ++ I+
Sbjct: 200 NMEDVHEAVQRIYPIL 215
>UniRef50_Q9HN56 Cluster: TATA-box-binding protein E; n=11;
Euryarchaeota|Rep: TATA-box-binding protein E -
Halobacterium salinarium (Halobacterium halobium)
Length = 186
Score = 72.1 bits (169), Expect = 7e-12
Identities = 29/72 (40%), Positives = 51/72 (70%)
Frame = -3
Query: 279 DPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSG 100
DP ++N+V++ + +LDL+ +A+ A+Y+P++F ++ R ++P++ ALIF SG
Sbjct: 3 DPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFRSG 62
Query: 99 KMVCTGAKSEED 64
K+VCTGAKS +D
Sbjct: 63 KIVCTGAKSTDD 74
Score = 63.3 bits (147), Expect = 3e-09
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Frame = -3
Query: 279 DPGILPQLQNIVSTVNLDCKLDLKKIA--LHARNAEYNPKRFAAVIMRIREPRTTALIFS 106
DP I+ +QNIV++ +L +L+L IA L N EY P++F ++ R+ +P AL+F
Sbjct: 96 DPEIV--VQNIVTSADLGRQLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFG 153
Query: 105 SGKMVCTGAKSEEDSRLAARKYARIIQKXG 16
SGK+V TG K +D+ A K +++ G
Sbjct: 154 SGKLVITGGKEPKDAEHAVDKITSRLEELG 183
>UniRef50_A0CM02 Cluster: Chromosome undetermined scaffold_21, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_21,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 198
Score = 71.7 bits (168), Expect = 9e-12
Identities = 32/67 (47%), Positives = 48/67 (71%)
Frame = -3
Query: 222 KLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARK 43
KLDL +A ++N EY RF A+I RI++P++TALIF +GKMV TG K + ++ AA+K
Sbjct: 11 KLDLDNLAHTSQNCEYKKSRFPALIQRIKDPKSTALIFEAGKMVITGTKGQSEAEEAAKK 70
Query: 42 YARIIQK 22
+ + I+K
Sbjct: 71 FRKQIEK 77
>UniRef50_UPI00005882B9 Cluster: PREDICTED: similar to
ENSANGP00000019042; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000019042
- Strongylocentrotus purpuratus
Length = 325
Score = 68.9 bits (161), Expect = 6e-11
Identities = 35/93 (37%), Positives = 53/93 (56%)
Frame = -3
Query: 279 DPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSG 100
+P + + N+V + C L+L++I + N EY + + V MR R P TA I+SSG
Sbjct: 95 EPSVDIYINNVVCAFGVRCHLNLRRIGQYGSNVEYR-REYGKVNMRFRRPSATATIWSSG 153
Query: 99 KMVCTGAKSEEDSRLAARKYARIIQKXGCTEKL 1
K+ TG SEE ++ AR+ AR +QK G +L
Sbjct: 154 KITITGNDSEEHAKKNARRCARALQKLGFNVRL 186
Score = 35.1 bits (77), Expect = 0.95
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -3
Query: 252 NIVSTVNLDCKLDLKKIA-LHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
N++ T ++ + ++ + H +A Y P+ AV ++ +PR T IFS+G + T
Sbjct: 193 NVLGTCSMPFAIRIRDFSEKHQNSASYEPELHPAVTYKLYQPRATLKIFSTGSITVT 249
>UniRef50_O52018 Cluster: TATA-box-binding protein D; n=26;
Euryarchaeota|Rep: TATA-box-binding protein D -
Halobacterium salinarium (Halobacterium halobium)
Length = 186
Score = 67.3 bits (157), Expect = 2e-10
Identities = 30/66 (45%), Positives = 46/66 (69%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
Q++N+V++ +L +L L+++A AEYNP F VI R+ +P++ LIF SGK VCTG
Sbjct: 9 QIENVVASTDLSQELALEQLATDLPGAEYNPGDFPGVIYRLDDPKSATLIFDSGKAVCTG 68
Query: 81 AKSEED 64
A+S +D
Sbjct: 69 AQSVDD 74
Score = 54.4 bits (125), Expect = 1e-06
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIA--LHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
+QNIV + +LD L+L IA L + EY P++F ++ R+ +P L+F SGK+V T
Sbjct: 101 VQNIVCSGSLDQDLNLNAIAIGLGLEDVEYEPEQFPGLVYRLNDPDVVVLLFGSGKLVIT 160
Query: 84 GAKSEEDSRLA 52
G + +D+ A
Sbjct: 161 GGSNPDDAHHA 171
>UniRef50_Q6M0L3 Cluster: TATA-box-binding protein; n=6;
Methanococcaceae|Rep: TATA-box-binding protein -
Methanococcus maripaludis
Length = 181
Score = 65.7 bits (153), Expect = 6e-10
Identities = 29/79 (36%), Positives = 49/79 (62%)
Frame = -3
Query: 252 NIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKS 73
N+V + + +DL+ A NAEY P++F ++ R+ EP+ LIF SGK+ CTGA+
Sbjct: 9 NVVVSTQIGTDIDLEYAADILDNAEYEPEQFPGLVCRLSEPKVALLIFRSGKLNCTGARC 68
Query: 72 EEDSRLAARKYARIIQKXG 16
+ED+ +A K + +++ G
Sbjct: 69 KEDAVIAINKIVKELKEAG 87
Score = 56.4 bits (130), Expect = 4e-07
Identities = 28/80 (35%), Positives = 49/80 (61%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
++QN+V+T L + +L I+ EY P++F ++ R+ EP+ LIF SGK+V TG
Sbjct: 97 KVQNMVATTELGMEPNLDDIST-LECTEYEPEQFPGLVYRLSEPKVVVLIFGSGKVVITG 155
Query: 81 AKSEEDSRLAARKYARIIQK 22
K ED+ +A K ++ +++
Sbjct: 156 LKVIEDAYIAFDKISKTLKE 175
>UniRef50_O51971 Cluster: TbpA; n=2; Halobacterium salinarum|Rep:
TbpA - Halobacterium salinarium (Halobacterium halobium)
Length = 100
Score = 63.7 bits (148), Expect = 2e-09
Identities = 27/76 (35%), Positives = 48/76 (63%)
Frame = -3
Query: 279 DPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSG 100
DP ++N+V++ ++ +LDL ++A+ A+Y+P++F ++ R+ EP AL+F SG
Sbjct: 3 DPKDTITIENVVASTAIEQELDLSRVAMDLEGADYDPEQFPGLVYRLDEPSVVALLFGSG 62
Query: 99 KMVCTGAKSEEDSRLA 52
K+V TG K D+ A
Sbjct: 63 KLVITGGKHPVDAEHA 78
>UniRef50_A4FXJ0 Cluster: TATA-box binding protein; n=1;
Methanococcus maripaludis|Rep: TATA-box binding protein
- Methanococcus maripaludis
Length = 174
Score = 62.1 bits (144), Expect = 7e-09
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
++ NIV+ ++ + K DL++I+ + AEY P++F V+++I +P+ T LIF SGK+V G
Sbjct: 97 KIYNIVANISFNKKFDLEEISENF-GAEYEPEQFPGVVLKINDPKATFLIFKSGKIVING 155
Query: 81 AKSEEDSRLAAR 46
KS E+ A R
Sbjct: 156 VKSNEELENAVR 167
Score = 51.2 bits (117), Expect = 1e-05
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = -3
Query: 267 LPQLQ--NIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKM 94
LP++ N+V + +L ++L+KI N+EY+P+R+ + +R + IF SGK+
Sbjct: 3 LPEINIVNVVGSCDLKTPMNLEKIYPLIENSEYDPERYHCIYIRTPGIKRLVTIFKSGKL 62
Query: 93 VCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
G+KS E+++ A + + + G T+K
Sbjct: 63 NTAGSKSIEEAKSAVLEIVDKLNELGFTDK 92
>UniRef50_Q8I9Q5 Cluster: TATA-binding protein-like factor; n=7;
Trypanosoma|Rep: TATA-binding protein-like factor -
Trypanosoma cruzi
Length = 263
Score = 58.8 bits (136), Expect = 7e-08
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = -3
Query: 351 NLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYN 172
N +S+++ + A+P + L P +A PG +P + I++ L +DL ++ RN E+
Sbjct: 53 NTNSEEVRA-ATPPNIQELFP-NAAPGTMPVIVGIIAQAKLGVGVDLCALSCATRNVEFV 110
Query: 171 PK-RFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQK 22
P+ R A MR+ EP L+ +SG M GA S +++ A ARII+K
Sbjct: 111 PRNRTPAATMRLHEPTAVVLVRTSGFMSIIGASSVGEAKQATELAARIIRK 161
>UniRef50_A3CUY3 Cluster: TATA-box binding protein; n=5;
Methanomicrobiales|Rep: TATA-box binding protein -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 193
Score = 58.0 bits (134), Expect = 1e-07
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Frame = -3
Query: 252 NIVSTVNLDCKLDLKK--IALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
NIV + ++ ++L K I L+ N EY P++F ++ RI +P+ AL+FSSGK++ TG
Sbjct: 113 NIVCSYDMGKYINLNKVVITLNLENIEYEPEQFPGLVYRIEDPKIVALLFSSGKIILTGG 172
Query: 78 KSEED 64
K+ ED
Sbjct: 173 KTVED 177
Score = 57.6 bits (133), Expect = 2e-07
Identities = 25/66 (37%), Positives = 44/66 (66%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
+++NIV++ + +DL+ ++ +N E N KRF + RI +P+ +LIFSSGK+V TG
Sbjct: 19 KIENIVASGVIADAIDLENVSDKIKNCELNTKRFPGAVYRIEKPKIASLIFSSGKVVLTG 78
Query: 81 AKSEED 64
++ +D
Sbjct: 79 IRNNQD 84
>UniRef50_Q9XZQ7 Cluster: TBP-like factor; n=3; Caenorhabditis|Rep:
TBP-like factor - Caenorhabditis elegans
Length = 454
Score = 57.2 bits (132), Expect = 2e-07
Identities = 29/90 (32%), Positives = 50/90 (55%)
Frame = -3
Query: 291 PLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALI 112
P+ D I Q++N+V L +DL+K+A++ N Y ++ ++ + R P +
Sbjct: 256 PMPDDGDIDIQIRNVVCNYTLPLHIDLRKLAMNTHNVTYEREK-GVMMKQKRSPGCYIKV 314
Query: 111 FSSGKMVCTGAKSEEDSRLAARKYARIIQK 22
+SSGK+ G +SE D + AAR AR +Q+
Sbjct: 315 YSSGKVYIVGCRSEADCKRAARSIARHVQR 344
Score = 40.3 bits (90), Expect = 0.025
Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++ N+++T L + ++++A + + Y P+ ++ R P+ T I ++G + T
Sbjct: 359 RVNNVLATCRLPFGIKIEEVAAKYPSESTYEPELSVGLVWRSVTPKATLRIHTTGSITVT 418
Query: 84 GAKSEEDSRLAARKYARIIQKXGCTEK 4
GA+SE D K I+ + C E+
Sbjct: 419 GAQSEADVLEVLSKIYPIVLEFRCLER 445
>UniRef50_Q9XZP5 Cluster: TBP-like factor; n=1; Brugia malayi|Rep:
TBP-like factor - Brugia malayi (Filarial nematode worm)
Length = 295
Score = 54.4 bits (125), Expect = 1e-06
Identities = 27/80 (33%), Positives = 47/80 (58%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
Q++N+V L +DL ++AL++ N ++ R ++ + R P I+SSGK+ G
Sbjct: 50 QIRNVVCNYTLPLHIDLHRVALNSGNVAFDRGR-GVLLKQKRNPSCYVKIYSSGKIYIVG 108
Query: 81 AKSEEDSRLAARKYARIIQK 22
+SE + + AAR AR++QK
Sbjct: 109 CRSESECKRAARGVARMVQK 128
Score = 39.9 bits (89), Expect = 0.033
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = -3
Query: 252 NIVSTVNLDCKLDLKKIALHARN-AEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAK 76
N+++T + + ++++A + ++Y P+ +I R PR T I ++G + TGA
Sbjct: 146 NVLATCKMPFGVKIEELAQKYPDCSQYEPELSVGLIWRSTNPRATLRIHTTGSITVTGAA 205
Query: 75 SEEDSRLAARKYARIIQKXGCTEKL 1
SE D A I+++ C +L
Sbjct: 206 SESDVMKAVEVIYPIVKEFRCALRL 230
>UniRef50_Q4QD71 Cluster: Transcription initiation factor-like
protein; n=5; Leishmania|Rep: Transcription initiation
factor-like protein - Leishmania major
Length = 293
Score = 49.2 bits (112), Expect = 5e-05
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = -3
Query: 276 PGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPK-RFAAVIMRIREPRTTALIFSSG 100
P P + + + ++ ++L +++ RN EY P R + MR+ EP ++ +SG
Sbjct: 90 PDAFPVVVAVQAQASIPVGINLAELSCATRNVEYMPNNRIPSATMRLHEPTAVVMMHNSG 149
Query: 99 KMVCTGAKSEEDSRLAARKYARIIQK 22
+ GA S ++R AA ARII+K
Sbjct: 150 ALSIIGAASVSEARQAAELAARIIRK 175
>UniRef50_Q74N53 Cluster: NEQ039; n=1; Nanoarchaeum equitans|Rep:
NEQ039 - Nanoarchaeum equitans
Length = 217
Score = 48.4 bits (110), Expect = 9e-05
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTAL-IFSSGKMVCT 85
+L+N+V T LD +++L +A +AEYNP++F + R+ + L +F +GK+V
Sbjct: 128 KLENMVWTGYLDYEVNLALLAEKDPDAEYNPEQFPGLTYRLGTDKKGRLHLFKNGKIVVP 187
Query: 84 GAKSEEDSRLAARKYARIIQKXGCTEK 4
G +S E+++ + I+K G K
Sbjct: 188 GTRSVEETKKIVEEVIERIKKYGVANK 214
Score = 34.3 bits (75), Expect = 1.7
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Frame = -3
Query: 261 QLQNIVSTVNLDCK--LDLKKIALHARNAEYNPKRFAAVIMRIREP-------RTTALIF 109
+L N+V V L LDL K+A NA Y RF V +++ P + L+F
Sbjct: 28 KLTNMVFHVRLTSSKPLDLSKVAEEMVNAIYEKDRFPGVRLKLNVPDENGGMHTISILLF 87
Query: 108 SSGKMVCTGAKSEEDSRLAARKYA-RIIQKXG--CTEK 4
G ++ +G ++++ +AA +YA II+K G C E+
Sbjct: 88 RKGPIIVSGV-TKKEHLIAAIEYACDIIRKYGGECIEE 124
>UniRef50_O52004 Cluster: TATA-box-binding protein C; n=1;
Halobacterium salinarum|Rep: TATA-box-binding protein C
- Halobacterium salinarium (Halobacterium halobium)
Length = 181
Score = 48.4 bits (110), Expect = 9e-05
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIA--LHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++N+V T LD + L +A L EY P++F ++ R E L+F++GKMV T
Sbjct: 99 VENVVCTAMLDELVSLNALAIGLGLEVTEYEPEQFPGLVYRPEEIGAVLLVFANGKMVIT 158
Query: 84 GAKSEEDSRLAARKYARIIQK 22
GAK E + A + +Q+
Sbjct: 159 GAKDTETAESAYEYFQSKVQE 179
Score = 41.1 bits (92), Expect = 0.014
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIA--LHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 88
++ NIV + +L +LD++ + L +EY+P + + +R+ E ++ SGK +
Sbjct: 4 EIANIVGSGDLGVELDVEPLEADLSTPYSEYDPSNYHGLYVRLEENGPLITVYRSGKYII 63
Query: 87 TGAKSEEDSRLAARKYARIIQKXGCTEK 4
TG S E ++ ++ G TE+
Sbjct: 64 TGCASMESLHETNEEFLGMLADLGVTEE 91
>UniRef50_O74045 Cluster: TATA-box-binding protein; n=2; Cenarchaeum
symbiosum|Rep: TATA-box-binding protein - Cenarchaeum
symbiosum
Length = 182
Score = 46.8 bits (106), Expect = 3e-04
Identities = 26/76 (34%), Positives = 45/76 (59%)
Frame = -3
Query: 285 SADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFS 106
+ D I P ++NIV+TV+ + + +I+ A Y+P F +I++ + + L+F+
Sbjct: 93 AGDCKIRPVVRNIVATVDAGRNVPIDRISSRMPGAVYDPGSFPGMILKGLD-SCSFLVFA 151
Query: 105 SGKMVCTGAKSEEDSR 58
SGKMV GAKS ++ R
Sbjct: 152 SGKMVIAGAKSPDELR 167
Score = 31.9 bits (69), Expect = 8.8
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = -3
Query: 279 DPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP--RTTALIFS 106
DP P++ N+VST +L ++ KK+A Y+ + I+ P + +F
Sbjct: 3 DPRTRPRVVNVVSTSDLVQRVSAKKMAA-MPCCMYDEAVYGGRCGYIKTPGMQGRVTVFI 61
Query: 105 SGKMVCTGAKS 73
SGKM+ GA+S
Sbjct: 62 SGKMISVGARS 72
>UniRef50_Q1ACW1 Cluster: TATA-box-binding protein; n=1;
Phytophthora parasitica|Rep: TATA-box-binding protein -
Phytophthora parasitica (Potato buckeye rot agent)
Length = 104
Score = 44.0 bits (99), Expect = 0.002
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = -3
Query: 195 HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARK-YARIIQ 25
HAR + Y P+ F +I ++ EP+ T LIF SGK+V GA+ A K Y ++Q
Sbjct: 15 HARFSSYEPEPFPGLIYKLVEPKLTLLIFVSGKIVLCGARDSNHLHQAIDKMYPVLLQ 72
>UniRef50_A2T4N7 Cluster: TATA-box-binding protein; n=4;
Euteleostomi|Rep: TATA-box-binding protein - Mus
musculus (Mouse)
Length = 64
Score = 41.5 bits (93), Expect = 0.011
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = -3
Query: 195 HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAK 76
H + + Y P+ F +I R+ +PR LIF SGK+V TGAK
Sbjct: 2 HQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAK 41
>UniRef50_Q6RUH3 Cluster: TATA-binding protein; n=1; Toxoplasma
gondii|Rep: TATA-binding protein - Toxoplasma gondii
Length = 187
Score = 35.5 bits (78), Expect = 0.72
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREP---RTTALIFSSGKM 94
+++N+V++ + + L+ +A H + Y P+ F ++ R + L+F SGK+
Sbjct: 101 KIENVVASADCGVPVRLEGLAFEHKEFSSYEPELFLGLVYRYNPTASLKAVLLVFVSGKV 160
Query: 93 VCTGAKS 73
V TG KS
Sbjct: 161 VITGCKS 167
>UniRef50_A7SEE3 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 690
Score = 33.5 bits (73), Expect = 2.9
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = -2
Query: 442 ICTNSQLCNSATDDAASNSTKYDVSDDSCRKSIKSTNAKPS*SCPNDSSDTTL 284
+C S LC+ T D +++ D+S D + +++S +P+ SCPN S L
Sbjct: 60 VC-GSVLCSDLTRDVLNSAHHGDLSSDIDQAALQSATKEPTQSCPNCSGQFLL 111
>UniRef50_A6SKR0 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 494
Score = 33.5 bits (73), Expect = 2.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 351 NLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVST 238
N S+ +L PAP+ PLT L D GI Q+ ++ T
Sbjct: 3 NFLSRMLLFPPHPAPLVPLTDLQYDTGITSQIDSLKKT 40
>UniRef50_UPI0000D57506 Cluster: PREDICTED: similar to CG2990-PB,
isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG2990-PB, isoform B - Tribolium castaneum
Length = 1146
Score = 33.1 bits (72), Expect = 3.8
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -2
Query: 421 CNSATDDAASNSTKYDVSDDSCRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKH 248
C ++ A+N+ KY++ +D R ++ T AK DSS TL R F T+ H
Sbjct: 1073 CTKSSAQVATNTLKYELLEDKRRLTVAVTRAKRKLLIVGDSS--TLVRYKTFETILTH 1128
>UniRef50_Q82V68 Cluster: Possible peroxidase, putative; n=2;
Nitrosomonadaceae|Rep: Possible peroxidase, putative -
Nitrosomonas europaea
Length = 508
Score = 32.7 bits (71), Expect = 5.0
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = -3
Query: 294 TPLSAD--PGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTT 121
TPL A+ PGILP+ T +LD K + ++ H R A NP R + +
Sbjct: 293 TPLIAEHIPGILPKDHGNHFTYDLDPKGNHCPVSAHVRRA--NP-RTGDLPTAVTGTGAI 349
Query: 120 ALIFSSGKMVCTGAKSEEDSRLAARKYARIIQK 22
ALI K++ G K EED +A+ ++ R++++
Sbjct: 350 ALINRLVKILGFGQKPEED-LIASSRFHRLLRR 381
>UniRef50_Q02CT2 Cluster: Proton-translocating NADH-quinone
oxidoreductase, chain M precursor; n=1; Solibacter
usitatus Ellin6076|Rep: Proton-translocating
NADH-quinone oxidoreductase, chain M precursor -
Solibacter usitatus (strain Ellin6076)
Length = 518
Score = 32.7 bits (71), Expect = 5.0
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 29 IILAYFLAAKRESSSLLAPVQTILPDEKIKAVVLGSLILIITAAKRLGLYSALRACNAIF 208
+ LA+FLA + L P+ T LPD ++A GS I++ + ++G Y L C +F
Sbjct: 214 LFLAFFLAFAIKVP--LFPLHTWLPDAHVEAPTAGS-IMLASVMLKMGTYGILHFCLPMF 270
>UniRef50_A4B8E5 Cluster: Toxin secretion ABC transporter
ATP-binding protein; n=2; Alteromonadales|Rep: Toxin
secretion ABC transporter ATP-binding protein -
Alteromonas macleodii 'Deep ecotype'
Length = 572
Score = 31.9 bits (69), Expect = 8.8
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +2
Query: 23 FWIILAYFLAAKRESSSLLAPVQTILPD----EKIKAVVLGSLILIITAAKRLGLYSALR 190
FW+ +AY +A + ++ VQT++ +AVV+ +++L +T G++SALR
Sbjct: 25 FWVAIAYGVAISLMTLAVPIAVQTLINSIANIGSTRAVVILAVVLFLTLFIS-GVFSALR 83
Query: 191 ACNAIFFKSNLQSRFTVE 244
F++ + +R T +
Sbjct: 84 MRVMEFYERKVYARLTAD 101
>UniRef50_Q8N5M4 Cluster: Tetratricopeptide repeat protein 9C; n=16;
Mammalia|Rep: Tetratricopeptide repeat protein 9C - Homo
sapiens (Human)
Length = 171
Score = 31.9 bits (69), Expect = 8.8
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = -3
Query: 330 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 151
L + P+P+ L P P + P+ +NI+ T DC +L L Y R +
Sbjct: 41 LDPSLPSPLPNLGPQG--PALTPEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQ 98
Query: 150 IMRIREPRTTALIFSSG 100
+ R+P ++ +G
Sbjct: 99 KVLERQPDNAKALYRAG 115
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,987,097
Number of Sequences: 1657284
Number of extensions: 8945395
Number of successful extensions: 29845
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 28716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29806
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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