Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_L04
         (512 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.7  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   3.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   4.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.4  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.5  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 166 TFCRCNYENKGTENNSFNFLIW 101
           +FC C Y +K T++  +N L +
Sbjct: 271 SFCYCYYNSKMTKDGVYNTLFF 292


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -3

Query: 345 SSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCK 220
           SS +     S  P +P +  SA P   PQL+      NL C+
Sbjct: 206 SSAKRKQLVSEHPDSPNSKKSATPSPPPQLEVNERKENLTCQ 247


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 78  WHQYRPFYQMRKLKLLFS 131
           WH   P Y++ K+ ++FS
Sbjct: 23  WHVENPTYRLYKIFVVFS 40


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +3

Query: 12  CSLISGLF*HIFLPLNGSLPHFWHQYRPF 98
           C +  G+       ++ S  HFWH +  F
Sbjct: 155 CPIHPGMTFRYHFNVHNSGTHFWHSHSGF 183


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = -2

Query: 214 FEEDCITCS*C*V*SQTFCRCNYENKGTENNSFNFLIW*NGLYWCQK*GRL 62
           F   CI  +   +    F + N+   GTEN      I+   ++ C+K  +L
Sbjct: 181 FTSTCIYTNLLRIIEADFSKLNHLLSGTENLDLVLPIYSQLVFMCKKINKL 231


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 179 SALRACNAIFFKSNLQSRFTV 241
           +A+R C  +F +   + +FTV
Sbjct: 202 NAVRLCFQVFLEGERRGKFTV 222


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 104 LVKWSVLVPKVRKTPV*RQENML 36
           LV+W+ LVP     P+  Q  +L
Sbjct: 225 LVQWAKLVPHFTSLPLTDQVQLL 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,937
Number of Sequences: 336
Number of extensions: 2350
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)