Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_L04
(512 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ448593-1|ABD93323.1| 375|Homo sapiens TATA box binding protei... 184 1e-46
BC117185-1|AAI17186.1| 375|Homo sapiens TATA box binding protei... 184 1e-46
BC117159-1|AAI17160.1| 375|Homo sapiens TATA box binding protei... 184 1e-46
AY457923-1|AAR24281.1| 375|Homo sapiens TBP-related factor 3 pr... 184 1e-46
X54993-1|CAA38736.1| 335|Homo sapiens TFIID protein. 174 1e-43
M55654-1|AAA36731.1| 339|Homo sapiens TATA-box binding protein ... 174 1e-43
CR456776-1|CAG33057.1| 339|Homo sapiens TBP protein. 174 1e-43
BT019657-1|AAV38463.1| 336|Homo sapiens TATA box binding protei... 174 1e-43
BC110341-1|AAI10342.1| 338|Homo sapiens TATA box binding protei... 174 1e-43
BC109054-1|AAI09055.1| 288|Homo sapiens TBP protein protein. 174 1e-43
BC109053-1|AAI09054.1| 338|Homo sapiens TATA box binding protei... 174 1e-43
AL031259-5|CAA20286.1| 339|Homo sapiens TATA box binding protei... 174 1e-43
M34960-1|AAC03409.1| 339|Homo sapiens transcription factor IID ... 172 5e-43
AL031259-6|CAD92543.1| 208|Homo sapiens TATA box binding protei... 107 3e-23
BC017559-1|AAH17559.1| 186|Homo sapiens TBP-like 1 protein. 79 1e-14
BC000381-1|AAH00381.1| 186|Homo sapiens TBP-like 1 protein. 79 1e-14
AL035699-3|CAD92516.1| 128|Homo sapiens TBP-like 1 protein. 79 1e-14
AL035699-2|CAD92515.1| 163|Homo sapiens TBP-like 1 protein. 79 1e-14
AL035699-1|CAB43704.1| 186|Homo sapiens TBP-like 1 protein. 79 1e-14
AF136570-1|AAD28785.1| 186|Homo sapiens TATA box binding protei... 79 1e-14
AF130312-1|AAD24800.1| 186|Homo sapiens STUD protein protein. 79 1e-14
AB020881-1|BAA75218.1| 186|Homo sapiens TBP-like protein protein. 79 1e-14
AL035699-4|CAD92517.1| 91|Homo sapiens TBP-like 1 protein. 77 5e-14
AL031259-4|CAD92542.1| 100|Homo sapiens TATA box binding protei... 39 0.009
BC053665-1|AAH53665.1| 171|Homo sapiens TTC9C protein protein. 32 1.4
BC032123-1|AAH32123.1| 171|Homo sapiens tetratricopeptide repea... 32 1.4
X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor rec... 31 1.8
M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor rec... 31 1.8
M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor rec... 31 1.8
M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein. 31 1.8
M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor rec... 31 1.8
M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor nec... 31 1.8
BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor r... 31 1.8
AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor r... 31 1.8
BC004258-1|AAH04258.2| 649|Homo sapiens WW domain containing ad... 30 4.1
AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein. 30 4.1
AL358234-3|CAH70768.1| 602|Homo sapiens WW domain containing ad... 30 4.1
AL358234-2|CAH70767.1| 495|Homo sapiens WW domain containing ad... 30 4.1
AL358234-1|CAH70766.1| 647|Homo sapiens WW domain containing ad... 30 4.1
AL161936-4|CAI40924.1| 602|Homo sapiens WW domain containing ad... 30 4.1
AL161936-3|CAI40923.1| 495|Homo sapiens WW domain containing ad... 30 4.1
AL161936-2|CAI40922.1| 647|Homo sapiens WW domain containing ad... 30 4.1
AL161936-1|CAI40921.1| 389|Homo sapiens WW domain containing ad... 30 4.1
AK223600-1|BAD97320.1| 647|Homo sapiens WW domain-containing ad... 30 4.1
AK055852-1|BAB71029.1| 602|Homo sapiens protein ( Homo sapiens ... 30 4.1
AB058747-1|BAB47473.1| 367|Homo sapiens KIAA1844 protein protein. 30 4.1
AL583839-9|CAI12345.2| 1013|Homo sapiens WNK lysine deficient pr... 30 5.5
AL583839-8|CAO03351.1| 1772|Homo sapiens WNK lysine deficient pr... 30 5.5
AL583839-7|CAO03350.1| 2219|Homo sapiens WNK lysine deficient pr... 30 5.5
AL583839-6|CAI12344.3| 2297|Homo sapiens WNK lysine deficient pr... 30 5.5
AL390760-5|CAH73070.2| 1013|Homo sapiens WNK lysine deficient pr... 30 5.5
AL390760-4|CAO03648.1| 1772|Homo sapiens WNK lysine deficient pr... 30 5.5
AL390760-3|CAO03647.1| 2219|Homo sapiens WNK lysine deficient pr... 30 5.5
AL390760-1|CAH73069.3| 2297|Homo sapiens WNK lysine deficient pr... 30 5.5
AL354991-5|CAI14450.2| 1013|Homo sapiens WNK lysine deficient pr... 30 5.5
AL354991-4|CAO03640.1| 1772|Homo sapiens WNK lysine deficient pr... 30 5.5
AL354991-3|CAO03639.1| 2219|Homo sapiens WNK lysine deficient pr... 30 5.5
AL354991-2|CAI14449.3| 2297|Homo sapiens WNK lysine deficient pr... 30 5.5
AJ242724-1|CAB44308.5| 2297|Homo sapiens putative mitogen-activa... 30 5.5
AB051547-1|BAB21851.2| 2219|Homo sapiens KIAA1760 protein protein. 30 5.5
>DQ448593-1|ABD93323.1| 375|Homo sapiens TATA box binding protein
like 2 protein.
Length = 375
Score = 184 bits (449), Expect = 1e-46
Identities = 90/105 (85%), Positives = 96/105 (91%)
Frame = -3
Query: 330 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 151
LS AS PMTP+TP+S GI+PQLQNIVSTVNL CKLDLKKIALHA+NAEYNPKRFAAV
Sbjct: 178 LSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAV 237
Query: 150 IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXG 16
IMRIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QK G
Sbjct: 238 IMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLG 282
Score = 48.0 bits (109), Expect = 2e-05
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 291 KIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 350
Query: 84 GAKSEED 64
GAK +
Sbjct: 351 GAKERSE 357
>BC117185-1|AAI17186.1| 375|Homo sapiens TATA box binding protein
like 2 protein.
Length = 375
Score = 184 bits (449), Expect = 1e-46
Identities = 90/105 (85%), Positives = 96/105 (91%)
Frame = -3
Query: 330 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 151
LS AS PMTP+TP+S GI+PQLQNIVSTVNL CKLDLKKIALHA+NAEYNPKRFAAV
Sbjct: 178 LSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAV 237
Query: 150 IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXG 16
IMRIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QK G
Sbjct: 238 IMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLG 282
Score = 48.0 bits (109), Expect = 2e-05
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 291 KIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 350
Query: 84 GAKSEED 64
GAK +
Sbjct: 351 GAKERSE 357
>BC117159-1|AAI17160.1| 375|Homo sapiens TATA box binding protein
like 2 protein.
Length = 375
Score = 184 bits (449), Expect = 1e-46
Identities = 90/105 (85%), Positives = 96/105 (91%)
Frame = -3
Query: 330 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 151
LS AS PMTP+TP+S GI+PQLQNIVSTVNL CKLDLKKIALHA+NAEYNPKRFAAV
Sbjct: 178 LSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAV 237
Query: 150 IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXG 16
IMRIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QK G
Sbjct: 238 IMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLG 282
Score = 48.0 bits (109), Expect = 2e-05
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 291 KIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 350
Query: 84 GAKSEED 64
GAK +
Sbjct: 351 GAKERSE 357
>AY457923-1|AAR24281.1| 375|Homo sapiens TBP-related factor 3
protein.
Length = 375
Score = 184 bits (449), Expect = 1e-46
Identities = 90/105 (85%), Positives = 96/105 (91%)
Frame = -3
Query: 330 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 151
LS AS PMTP+TP+S GI+PQLQNIVSTVNL CKLDLKKIALHA+NAEYNPKRFAAV
Sbjct: 178 LSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAV 237
Query: 150 IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXG 16
IMRIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QK G
Sbjct: 238 IMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLG 282
Score = 48.0 bits (109), Expect = 2e-05
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 291 KIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 350
Query: 84 GAKSEED 64
GAK +
Sbjct: 351 GAKERSE 357
>X54993-1|CAA38736.1| 335|Homo sapiens TFIID protein.
Length = 335
Score = 174 bits (424), Expect = 1e-43
Identities = 85/102 (83%), Positives = 89/102 (87%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 144 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 203
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QK G K
Sbjct: 204 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAK 245
Score = 47.6 bits (108), Expect = 3e-05
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 250 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 309
Query: 84 GAK 76
GAK
Sbjct: 310 GAK 312
>M55654-1|AAA36731.1| 339|Homo sapiens TATA-box binding protein
protein.
Length = 339
Score = 174 bits (424), Expect = 1e-43
Identities = 85/102 (83%), Positives = 89/102 (87%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 207
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QK G K
Sbjct: 208 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAK 249
Score = 47.6 bits (108), Expect = 3e-05
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 254 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 313
Query: 84 GAK 76
GAK
Sbjct: 314 GAK 316
>CR456776-1|CAG33057.1| 339|Homo sapiens TBP protein.
Length = 339
Score = 174 bits (424), Expect = 1e-43
Identities = 85/102 (83%), Positives = 89/102 (87%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 207
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QK G K
Sbjct: 208 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAK 249
Score = 47.6 bits (108), Expect = 3e-05
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 254 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 313
Query: 84 GAK 76
GAK
Sbjct: 314 GAK 316
>BT019657-1|AAV38463.1| 336|Homo sapiens TATA box binding protein
protein.
Length = 336
Score = 174 bits (424), Expect = 1e-43
Identities = 85/102 (83%), Positives = 89/102 (87%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 145 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 204
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QK G K
Sbjct: 205 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAK 246
Score = 46.0 bits (104), Expect = 8e-05
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLK-KIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 251 KIQNMVGSCDVKFPIRLEGPVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 310
Query: 84 GAK 76
GAK
Sbjct: 311 GAK 313
>BC110341-1|AAI10342.1| 338|Homo sapiens TATA box binding protein
protein.
Length = 338
Score = 174 bits (424), Expect = 1e-43
Identities = 85/102 (83%), Positives = 89/102 (87%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 147 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 206
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QK G K
Sbjct: 207 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAK 248
Score = 47.6 bits (108), Expect = 3e-05
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 253 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 312
Query: 84 GAK 76
GAK
Sbjct: 313 GAK 315
>BC109054-1|AAI09055.1| 288|Homo sapiens TBP protein protein.
Length = 288
Score = 174 bits (424), Expect = 1e-43
Identities = 85/102 (83%), Positives = 89/102 (87%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 97 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 156
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QK G K
Sbjct: 157 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAK 198
Score = 47.6 bits (108), Expect = 3e-05
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 203 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 262
Query: 84 GAK 76
GAK
Sbjct: 263 GAK 265
>BC109053-1|AAI09054.1| 338|Homo sapiens TATA box binding protein
protein.
Length = 338
Score = 174 bits (424), Expect = 1e-43
Identities = 85/102 (83%), Positives = 89/102 (87%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 147 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 206
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QK G K
Sbjct: 207 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAK 248
Score = 47.6 bits (108), Expect = 3e-05
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 253 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 312
Query: 84 GAK 76
GAK
Sbjct: 313 GAK 315
>AL031259-5|CAA20286.1| 339|Homo sapiens TATA box binding protein
protein.
Length = 339
Score = 174 bits (424), Expect = 1e-43
Identities = 85/102 (83%), Positives = 89/102 (87%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 207
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QK G K
Sbjct: 208 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAK 249
Score = 47.6 bits (108), Expect = 3e-05
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 254 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 313
Query: 84 GAK 76
GAK
Sbjct: 314 GAK 316
>M34960-1|AAC03409.1| 339|Homo sapiens transcription factor IID
protein.
Length = 339
Score = 172 bits (419), Expect = 5e-43
Identities = 84/102 (82%), Positives = 88/102 (86%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL RNAEYNPKRFAAVIMRIREP
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRRRNAEYNPKRFAAVIMRIREP 207
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QK G K
Sbjct: 208 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAK 249
Score = 47.6 bits (108), Expect = 3e-05
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + + Y P+ F +I R+ +PR LIF SGK+V T
Sbjct: 254 KIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLT 313
Query: 84 GAK 76
GAK
Sbjct: 314 GAK 316
>AL031259-6|CAD92543.1| 208|Homo sapiens TATA box binding protein
protein.
Length = 208
Score = 107 bits (256), Expect = 3e-23
Identities = 51/61 (83%), Positives = 53/61 (86%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 207
Query: 129 R 127
R
Sbjct: 208 R 208
>BC017559-1|AAH17559.1| 186|Homo sapiens TBP-like 1 protein.
Length = 186
Score = 78.6 bits (185), Expect = 1e-14
Identities = 37/81 (45%), Positives = 54/81 (66%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SEE+++ AR+ AR +QK G
Sbjct: 72 TSEEEAKFGARRLARSLQKLG 92
Score = 36.3 bits (80), Expect = 0.063
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 252 NIVSTVNLDCKLDLKKIALHAR-NAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
N+++ N+ ++ L + + R +A Y P+ AV RI+ R T IFS+G + TG
Sbjct: 104 NVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTG 161
>BC000381-1|AAH00381.1| 186|Homo sapiens TBP-like 1 protein.
Length = 186
Score = 78.6 bits (185), Expect = 1e-14
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAA-VIMRIREPRTTALIFSSGKMVCTG 82
+ N+V C L+L+KIAL N Y KR A V+M++R+PR TA I+SSGK++CTG
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIY--KRDAGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 81 AKSEEDSRLAARKYARIIQKXG 16
A SEE+++ AR+ AR +QK G
Sbjct: 71 ATSEEEAKFGARRLARSLQKLG 92
Score = 36.3 bits (80), Expect = 0.063
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 252 NIVSTVNLDCKLDLKKIALHAR-NAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
N+++ N+ ++ L + + R +A Y P+ AV RI+ R T IFS+G + TG
Sbjct: 104 NVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTG 161
>AL035699-3|CAD92516.1| 128|Homo sapiens TBP-like 1 protein.
Length = 128
Score = 78.6 bits (185), Expect = 1e-14
Identities = 37/81 (45%), Positives = 54/81 (66%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SEE+++ AR+ AR +QK G
Sbjct: 72 TSEEEAKFGARRLARSLQKLG 92
>AL035699-2|CAD92515.1| 163|Homo sapiens TBP-like 1 protein.
Length = 163
Score = 78.6 bits (185), Expect = 1e-14
Identities = 37/81 (45%), Positives = 54/81 (66%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SEE+++ AR+ AR +QK G
Sbjct: 72 TSEEEAKFGARRLARSLQKLG 92
Score = 36.3 bits (80), Expect = 0.063
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 252 NIVSTVNLDCKLDLKKIALHAR-NAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
N+++ N+ ++ L + + R +A Y P+ AV RI+ R T IFS+G + TG
Sbjct: 104 NVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTG 161
>AL035699-1|CAB43704.1| 186|Homo sapiens TBP-like 1 protein.
Length = 186
Score = 78.6 bits (185), Expect = 1e-14
Identities = 37/81 (45%), Positives = 54/81 (66%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SEE+++ AR+ AR +QK G
Sbjct: 72 TSEEEAKFGARRLARSLQKLG 92
Score = 36.3 bits (80), Expect = 0.063
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 252 NIVSTVNLDCKLDLKKIALHAR-NAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
N+++ N+ ++ L + + R +A Y P+ AV RI+ R T IFS+G + TG
Sbjct: 104 NVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTG 161
>AF136570-1|AAD28785.1| 186|Homo sapiens TATA box binding
protein-related factor 2 protein.
Length = 186
Score = 78.6 bits (185), Expect = 1e-14
Identities = 37/81 (45%), Positives = 54/81 (66%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SEE+++ AR+ AR +QK G
Sbjct: 72 TSEEEAKFGARRLARSLQKLG 92
Score = 36.3 bits (80), Expect = 0.063
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 252 NIVSTVNLDCKLDLKKIALHAR-NAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
N+++ N+ ++ L + + R +A Y P+ AV RI+ R T IFS+G + TG
Sbjct: 104 NVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTG 161
>AF130312-1|AAD24800.1| 186|Homo sapiens STUD protein protein.
Length = 186
Score = 78.6 bits (185), Expect = 1e-14
Identities = 37/81 (45%), Positives = 54/81 (66%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SEE+++ AR+ AR +QK G
Sbjct: 72 TSEEEAKFGARRLARSLQKLG 92
Score = 36.3 bits (80), Expect = 0.063
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 252 NIVSTVNLDCKLDLKKIALHAR-NAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
N+++ N+ ++ L + + R +A Y P+ AV RI+ R T IFS+G + TG
Sbjct: 104 NVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTG 161
>AB020881-1|BAA75218.1| 186|Homo sapiens TBP-like protein protein.
Length = 186
Score = 78.6 bits (185), Expect = 1e-14
Identities = 37/81 (45%), Positives = 54/81 (66%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SEE+++ AR+ AR +QK G
Sbjct: 72 TSEEEAKFGARRLARSLQKLG 92
Score = 36.3 bits (80), Expect = 0.063
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 252 NIVSTVNLDCKLDLKKIALHAR-NAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 82
N+++ N+ ++ L + + R +A Y P+ AV RI+ R T IFS+G + TG
Sbjct: 104 NVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTG 161
>AL035699-4|CAD92517.1| 91|Homo sapiens TBP-like 1 protein.
Length = 91
Score = 76.6 bits (180), Expect = 5e-14
Identities = 36/79 (45%), Positives = 53/79 (67%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 78 KSEEDSRLAARKYARIIQK 22
SEE+++ AR+ AR +QK
Sbjct: 72 TSEEEAKFGARRLARSLQK 90
>AL031259-4|CAD92542.1| 100|Homo sapiens TATA box binding protein
protein.
Length = 100
Score = 39.1 bits (87), Expect = 0.009
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = -3
Query: 177 YNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAK 76
Y P+ F +I R+ +PR LIF SGK+V TGAK
Sbjct: 44 YEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAK 77
Score = 35.9 bits (79), Expect = 0.083
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 72 EEDSRLAARKYARIIQKXGCTEK 4
EE SRLAARKYAR++QK G K
Sbjct: 1 EEQSRLAARKYARVVQKLGFPAK 23
>BC053665-1|AAH53665.1| 171|Homo sapiens TTC9C protein protein.
Length = 171
Score = 31.9 bits (69), Expect = 1.4
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = -3
Query: 330 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 151
L + P+P+ L P P + P+ +NI+ T DC +L L Y R +
Sbjct: 41 LDPSLPSPLPNLGPQG--PALTPEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQ 98
Query: 150 IMRIREPRTTALIFSSG 100
+ R+P ++ +G
Sbjct: 99 KVLERQPDNAKALYRAG 115
>BC032123-1|AAH32123.1| 171|Homo sapiens tetratricopeptide repeat
domain 9C protein.
Length = 171
Score = 31.9 bits (69), Expect = 1.4
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = -3
Query: 330 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 151
L + P+P+ L P P + P+ +NI+ T DC +L L Y R +
Sbjct: 41 LDPSLPSPLPNLGPQG--PALTPEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQ 98
Query: 150 IMRIREPRTTALIFSSG 100
+ R+P ++ +G
Sbjct: 99 KVLERQPDNAKALYRAG 115
>X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor
receptor type 1 protein.
Length = 455
Score = 31.5 bits (68), Expect = 1.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -2
Query: 358 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 179
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 178 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 92
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor
receptor 1 protein.
Length = 455
Score = 31.5 bits (68), Expect = 1.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -2
Query: 358 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 179
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 178 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 92
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 31.5 bits (68), Expect = 1.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -2
Query: 358 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 179
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 178 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 92
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein.
Length = 453
Score = 31.5 bits (68), Expect = 1.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -2
Query: 358 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 179
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 178 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 92
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 31.5 bits (68), Expect = 1.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -2
Query: 358 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 179
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 178 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 92
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor
necrosis factor receptor mRNA, complete cds. ).
Length = 455
Score = 31.5 bits (68), Expect = 1.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -2
Query: 358 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 179
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 178 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 92
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 31.5 bits (68), Expect = 1.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -2
Query: 358 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 179
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 178 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 92
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 31.5 bits (68), Expect = 1.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -2
Query: 358 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 179
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 178 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 92
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>BC004258-1|AAH04258.2| 649|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 649
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -3
Query: 318 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 202
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 346 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 386
>AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein.
Length = 689
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 318 SPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLK 208
SPAP TP+TPL G P +++S+V L D++
Sbjct: 331 SPAPTTPVTPL----GTTPPSSDVISSVELPLDADVQ 363
>AL358234-3|CAH70768.1| 602|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 602
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -3
Query: 318 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 202
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 301 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 341
>AL358234-2|CAH70767.1| 495|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 495
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -3
Query: 318 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 202
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 198 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 238
>AL358234-1|CAH70766.1| 647|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 647
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -3
Query: 318 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 202
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 346 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 386
>AL161936-4|CAI40924.1| 602|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 602
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -3
Query: 318 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 202
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 301 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 341
>AL161936-3|CAI40923.1| 495|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 495
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -3
Query: 318 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 202
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 198 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 238
>AL161936-2|CAI40922.1| 647|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 647
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -3
Query: 318 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 202
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 346 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 386
>AL161936-1|CAI40921.1| 389|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 389
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -3
Query: 318 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 202
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 88 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 128
>AK223600-1|BAD97320.1| 647|Homo sapiens WW domain-containing
adapter with a coiled-coil region isoform 1 variant
protein.
Length = 647
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -3
Query: 318 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 202
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 346 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 386
>AK055852-1|BAB71029.1| 602|Homo sapiens protein ( Homo sapiens
cDNA FLJ31290 fis, clone KIDNE2007352, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 602
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -3
Query: 318 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 202
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 301 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 341
>AB058747-1|BAB47473.1| 367|Homo sapiens KIAA1844 protein protein.
Length = 367
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -3
Query: 318 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 202
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 278 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 318
>AL583839-9|CAI12345.2| 1013|Homo sapiens WNK lysine deficient
protein kinase 2 protein.
Length = 1013
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = -3
Query: 348 LSSQQMLSQASP-----APMTPLTPLSADPGILPQ 259
L+SQQ+LSQA P AP PL P S LPQ
Sbjct: 158 LASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQ 192
>AL583839-8|CAO03351.1| 1772|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 1772
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = -3
Query: 348 LSSQQMLSQASP-----APMTPLTPLSADPGILPQ 259
L+SQQ+LSQA P AP PL P S LPQ
Sbjct: 965 LASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQ 999
>AL583839-7|CAO03350.1| 2219|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 2219
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = -3
Query: 348 LSSQQMLSQASP-----APMTPLTPLSADPGILPQ 259
L+SQQ+LSQA P AP PL P S LPQ
Sbjct: 1357 LASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQ 1391
>AL583839-6|CAI12344.3| 2297|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 2297
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = -3
Query: 348 LSSQQMLSQASP-----APMTPLTPLSADPGILPQ 259
L+SQQ+LSQA P AP PL P S LPQ
Sbjct: 1399 LASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQ 1433
>AL390760-5|CAH73070.2| 1013|Homo sapiens WNK lysine deficient
protein kinase 2 protein.
Length = 1013
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = -3
Query: 348 LSSQQMLSQASP-----APMTPLTPLSADPGILPQ 259
L+SQQ+LSQA P AP PL P S LPQ
Sbjct: 158 LASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQ 192
>AL390760-4|CAO03648.1| 1772|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 1772
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = -3
Query: 348 LSSQQMLSQASP-----APMTPLTPLSADPGILPQ 259
L+SQQ+LSQA P AP PL P S LPQ
Sbjct: 965 LASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQ 999
>AL390760-3|CAO03647.1| 2219|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 2219
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = -3
Query: 348 LSSQQMLSQASP-----APMTPLTPLSADPGILPQ 259
L+SQQ+LSQA P AP PL P S LPQ
Sbjct: 1357 LASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQ 1391
>AL390760-1|CAH73069.3| 2297|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 2297
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = -3
Query: 348 LSSQQMLSQASP-----APMTPLTPLSADPGILPQ 259
L+SQQ+LSQA P AP PL P S LPQ
Sbjct: 1399 LASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQ 1433
>AL354991-5|CAI14450.2| 1013|Homo sapiens WNK lysine deficient
protein kinase 2 protein.
Length = 1013
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = -3
Query: 348 LSSQQMLSQASP-----APMTPLTPLSADPGILPQ 259
L+SQQ+LSQA P AP PL P S LPQ
Sbjct: 158 LASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQ 192
>AL354991-4|CAO03640.1| 1772|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 1772
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = -3
Query: 348 LSSQQMLSQASP-----APMTPLTPLSADPGILPQ 259
L+SQQ+LSQA P AP PL P S LPQ
Sbjct: 965 LASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQ 999
>AL354991-3|CAO03639.1| 2219|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 2219
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = -3
Query: 348 LSSQQMLSQASP-----APMTPLTPLSADPGILPQ 259
L+SQQ+LSQA P AP PL P S LPQ
Sbjct: 1357 LASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQ 1391
>AL354991-2|CAI14449.3| 2297|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 2297
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = -3
Query: 348 LSSQQMLSQASP-----APMTPLTPLSADPGILPQ 259
L+SQQ+LSQA P AP PL P S LPQ
Sbjct: 1399 LASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQ 1433
>AJ242724-1|CAB44308.5| 2297|Homo sapiens putative mitogen-activated
protein kinase kinase kinase protein.
Length = 2297
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = -3
Query: 348 LSSQQMLSQASP-----APMTPLTPLSADPGILPQ 259
L+SQQ+LSQA P AP PL P S LPQ
Sbjct: 1399 LASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQ 1433
>AB051547-1|BAB21851.2| 2219|Homo sapiens KIAA1760 protein protein.
Length = 2219
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = -3
Query: 348 LSSQQMLSQASP-----APMTPLTPLSADPGILPQ 259
L+SQQ+LSQA P AP PL P S LPQ
Sbjct: 1357 LASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQ 1391
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,901,985
Number of Sequences: 237096
Number of extensions: 1380763
Number of successful extensions: 4016
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 3722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4003
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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