Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_L04
(512 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U35147-1|AAA79092.1| 354|Drosophila melanogaster TATA-box bindi... 191 5e-49
U11718-1|AAA68629.1| 353|Drosophila melanogaster TATA-box bindi... 189 2e-48
M38388-1|AAA28926.1| 353|Drosophila melanogaster TATA-consensus... 189 2e-48
M38082-1|AAA28931.1| 353|Drosophila melanogaster TATA-box bindi... 189 2e-48
AY069663-1|AAL39808.1| 353|Drosophila melanogaster LD44083p pro... 189 2e-48
AE013599-3256|AAF46754.1| 353|Drosophila melanogaster CG9874-PA... 189 2e-48
X70838-1|CAA50186.1| 224|Drosophila melanogaster TBP-related fa... 106 2e-23
X70837-1|CAA50185.1| 224|Drosophila melanogaster TBP-related fa... 106 2e-23
AY128483-1|AAM75076.1| 224|Drosophila melanogaster RE61442p pro... 106 2e-23
AE014134-1392|AAF52600.1| 224|Drosophila melanogaster CG7562-PA... 106 2e-23
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein. 76 3e-14
AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p pro... 76 3e-14
AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like fac... 76 3e-14
AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box bin... 76 3e-14
AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-P... 76 3e-14
AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-P... 76 3e-14
AY864367-1|AAX38005.1| 574|Drosophila melanogaster scavenger re... 33 0.30
AY118689-1|AAM50549.1| 893|Drosophila melanogaster AT15637p pro... 30 1.6
AE013599-3102|AAM68188.1| 889|Drosophila melanogaster CG10543-P... 30 1.6
AE013599-3101|AAO41340.1| 1024|Drosophila melanogaster CG10543-P... 30 1.6
AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-P... 30 1.6
AY865073-2|AAW79477.1| 629|Drosophila melanogaster SR-CI protein. 28 6.5
AY865065-2|AAW79462.1| 632|Drosophila melanogaster SR-CI protein. 28 6.5
AY865061-2|AAW79454.1| 632|Drosophila melanogaster SR-CI protein. 28 6.5
AY865059-1|AAW79451.1| 632|Drosophila melanogaster SR-CI protein. 28 6.5
AY865074-2|AAW79479.1| 629|Drosophila melanogaster SR-CI protein. 28 8.5
AY865072-1|AAW79476.1| 629|Drosophila melanogaster SR-CI protein. 28 8.5
AE013599-203|AAM70811.1| 352|Drosophila melanogaster CG15909-PA... 28 8.5
>U35147-1|AAA79092.1| 354|Drosophila melanogaster TATA-box binding
protein protein.
Length = 354
Score = 191 bits (465), Expect = 5e-49
Identities = 96/118 (81%), Positives = 100/118 (84%)
Frame = -3
Query: 357 AGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAE 178
AG+ S + PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAE
Sbjct: 147 AGDALSNIHQTMGPSTPMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAE 206
Query: 177 YNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
YNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSE+DSRLAARKYARIIQK G K
Sbjct: 207 YNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEDDSRLAARKYARIIQKLGFPAK 264
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + Y P+ F +I R+ PR LIF SGK+V T
Sbjct: 269 KIQNMVGSCDVKFPIRLEGLVLTHCNFSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLT 328
Query: 84 GAKSEEDSRLAARKYARIIQK 22
GAK ++ A K I++K
Sbjct: 329 GAKVRQEIYDAFDKIFPILKK 349
>U11718-1|AAA68629.1| 353|Drosophila melanogaster TATA-box binding
protein protein.
Length = 353
Score = 189 bits (461), Expect = 2e-48
Identities = 93/102 (91%), Positives = 95/102 (93%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAVIMRIREP
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 221
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSE+DSRLAARKYARIIQK G K
Sbjct: 222 RTTALIFSSGKMVCTGAKSEDDSRLAARKYARIIQKLGFPAK 263
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + Y P+ F +I R+ PR LIF SGK+V T
Sbjct: 268 KIQNMVGSCDVKFPIRLEGLVLTHCNFSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLT 327
Query: 84 GAKSEEDSRLAARKYARIIQK 22
GAK ++ A K I++K
Sbjct: 328 GAKVRQEIYDAFDKIFPILKK 348
>M38388-1|AAA28926.1| 353|Drosophila melanogaster
TATA-consensus-binding transcriptionfactor TFII protein.
Length = 353
Score = 189 bits (461), Expect = 2e-48
Identities = 93/102 (91%), Positives = 95/102 (93%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAVIMRIREP
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 221
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSE+DSRLAARKYARIIQK G K
Sbjct: 222 RTTALIFSSGKMVCTGAKSEDDSRLAARKYARIIQKLGFPAK 263
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + Y P+ F +I R+ PR LIF SGK+V T
Sbjct: 268 KIQNMVGSCDVKFPIRLEGLVLTHCNFSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLT 327
Query: 84 GAKSEEDSRLAARKYARIIQK 22
GAK ++ A K I++K
Sbjct: 328 GAKVRQEIYDAFDKIFPILKK 348
>M38082-1|AAA28931.1| 353|Drosophila melanogaster TATA-box binding
protein protein.
Length = 353
Score = 189 bits (461), Expect = 2e-48
Identities = 93/102 (91%), Positives = 95/102 (93%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAVIMRIREP
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 221
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSE+DSRLAARKYARIIQK G K
Sbjct: 222 RTTALIFSSGKMVCTGAKSEDDSRLAARKYARIIQKLGFPAK 263
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + Y P+ F +I R+ PR LIF SGK+V T
Sbjct: 268 KIQNMVGSCDVKFPIRLEGLVLTHCNFSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLT 327
Query: 84 GAKSEEDSRLAARKYARIIQK 22
GAK ++ A K I++K
Sbjct: 328 GAKVRQEIYDAFDKIFPILKK 348
>AY069663-1|AAL39808.1| 353|Drosophila melanogaster LD44083p
protein.
Length = 353
Score = 189 bits (461), Expect = 2e-48
Identities = 93/102 (91%), Positives = 95/102 (93%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAVIMRIREP
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 221
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSE+DSRLAARKYARIIQK G K
Sbjct: 222 RTTALIFSSGKMVCTGAKSEDDSRLAARKYARIIQKLGFPAK 263
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + Y P+ F +I R+ PR LIF SGK+V T
Sbjct: 268 KIQNMVGSCDVKFPIRLEGLVLTHCNFSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLT 327
Query: 84 GAKSEEDSRLAARKYARIIQK 22
GAK ++ A K I++K
Sbjct: 328 GAKVRQEIYDAFDKIFPILKK 348
>AE013599-3256|AAF46754.1| 353|Drosophila melanogaster CG9874-PA
protein.
Length = 353
Score = 189 bits (461), Expect = 2e-48
Identities = 93/102 (91%), Positives = 95/102 (93%)
Frame = -3
Query: 309 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 130
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAVIMRIREP
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 221
Query: 129 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXGCTEK 4
RTTALIFSSGKMVCTGAKSE+DSRLAARKYARIIQK G K
Sbjct: 222 RTTALIFSSGKMVCTGAKSEDDSRLAARKYARIIQKLGFPAK 263
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIAL-HARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
++QN+V + ++ + L+ + L H + Y P+ F +I R+ PR LIF SGK+V T
Sbjct: 268 KIQNMVGSCDVKFPIRLEGLVLTHCNFSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLT 327
Query: 84 GAKSEEDSRLAARKYARIIQK 22
GAK ++ A K I++K
Sbjct: 328 GAKVRQEIYDAFDKIFPILKK 348
>X70838-1|CAA50186.1| 224|Drosophila melanogaster TBP-related
factor protein.
Length = 224
Score = 106 bits (254), Expect = 2e-23
Identities = 52/115 (45%), Positives = 77/115 (66%)
Frame = -3
Query: 360 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNA 181
A N ++ + P+ + P A I +LQNIV+T +++C+LDLK I RN+
Sbjct: 19 ATSNAAANPHAALQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRTRNS 76
Query: 180 EYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXG 16
EY+PKRF VIMR+ PR TALIF +GK++CTGA++E ++ + +RK+ARI+QK G
Sbjct: 77 EYSPKRFRGVIMRMHSPRCTALIFRTGKVICTGARNEIEADIGSRKFARILQKLG 131
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIA-LHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
+LQNIV+TV+L + L+ + +H + + Y P+ F +I R+ +PR LIF +GK+V T
Sbjct: 140 KLQNIVATVDLRFPIRLENLNHVHGQFSSYEPEMFPGLIYRMVKPRIVLLIFVNGKVVFT 199
Query: 84 GAKSEED 64
GAKS +D
Sbjct: 200 GAKSRKD 206
>X70837-1|CAA50185.1| 224|Drosophila melanogaster TBP-related
factor protein.
Length = 224
Score = 106 bits (254), Expect = 2e-23
Identities = 52/115 (45%), Positives = 77/115 (66%)
Frame = -3
Query: 360 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNA 181
A N ++ + P+ + P A I +LQNIV+T +++C+LDLK I RN+
Sbjct: 19 ATSNAAANPHAALQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRTRNS 76
Query: 180 EYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXG 16
EY+PKRF VIMR+ PR TALIF +GK++CTGA++E ++ + +RK+ARI+QK G
Sbjct: 77 EYSPKRFRGVIMRMHSPRCTALIFRTGKVICTGARNEIEADIGSRKFARILQKLG 131
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIA-LHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
+LQNIV+TV+L + L+ + +H + + Y P+ F +I R+ +PR LIF +GK+V T
Sbjct: 140 KLQNIVATVDLRFPIRLENLNHVHGQFSSYEPEMFPGLIYRMVKPRIVLLIFVNGKVVFT 199
Query: 84 GAKSEED 64
GAKS +D
Sbjct: 200 GAKSRKD 206
>AY128483-1|AAM75076.1| 224|Drosophila melanogaster RE61442p
protein.
Length = 224
Score = 106 bits (254), Expect = 2e-23
Identities = 52/115 (45%), Positives = 77/115 (66%)
Frame = -3
Query: 360 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNA 181
A N ++ + P+ + P A I +LQNIV+T +++C+LDLK I RN+
Sbjct: 19 ATSNAAANPHAALQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRTRNS 76
Query: 180 EYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXG 16
EY+PKRF VIMR+ PR TALIF +GK++CTGA++E ++ + +RK+ARI+QK G
Sbjct: 77 EYSPKRFRGVIMRMHSPRCTALIFRTGKVICTGARNEIEADIGSRKFARILQKLG 131
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIA-LHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
+LQNIV+TV+L + L+ + +H + + Y P+ F +I R+ +PR LIF +GK+V T
Sbjct: 140 KLQNIVATVDLRFPIRLENLNHVHGQFSSYEPEMFPGLIYRMVKPRIVLLIFVNGKVVFT 199
Query: 84 GAKSEED 64
GAKS +D
Sbjct: 200 GAKSRKD 206
>AE014134-1392|AAF52600.1| 224|Drosophila melanogaster CG7562-PA
protein.
Length = 224
Score = 106 bits (254), Expect = 2e-23
Identities = 52/115 (45%), Positives = 77/115 (66%)
Frame = -3
Query: 360 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNA 181
A N ++ + P+ + P A I +LQNIV+T +++C+LDLK I RN+
Sbjct: 19 ATSNAAANPHAALQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRTRNS 76
Query: 180 EYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKXG 16
EY+PKRF VIMR+ PR TALIF +GK++CTGA++E ++ + +RK+ARI+QK G
Sbjct: 77 EYSPKRFRGVIMRMHSPRCTALIFRTGKVICTGARNEIEADIGSRKFARILQKLG 131
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIA-LHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 85
+LQNIV+TV+L + L+ + +H + + Y P+ F +I R+ +PR LIF +GK+V T
Sbjct: 140 KLQNIVATVDLRFPIRLENLNHVHGQFSSYEPEMFPGLIYRMVKPRIVLLIFVNGKVVFT 199
Query: 84 GAKSEED 64
GAKS +D
Sbjct: 200 GAKSRKD 206
>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
Length = 1715
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V + ++ C L L++IAL N EY + V M++R P TTA I+SSG++ CTGA
Sbjct: 1287 INNVVCSFSVGCHLKLREIALQGSNVEYRREN-GMVTMKLRHPYTTASIWSSGRITCTGA 1345
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SE +++AAR+YAR + K G
Sbjct: 1346 TSESMAKVAARRYARCLGKLG 1366
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIA-LHARNAEYNPKRFAAVIMRIR--EPRTTALIFSSGKMV 91
++ N++ T ++ + + + H NA Y P+ V ++R +P+ T IFS+G +
Sbjct: 1375 RIVNVLGTCSMPWAIKIVNFSERHRENASYEPELHPGVTYKMRDPDPKATLKIFSTGSVT 1434
Query: 90 CTGA 79
T A
Sbjct: 1435 VTAA 1438
>AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p
protein.
Length = 632
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V + ++ C L L++IAL N EY + V M++R P TTA I+SSG++ CTGA
Sbjct: 204 INNVVCSFSVGCHLKLREIALQGSNVEYRREN-GMVTMKLRHPYTTASIWSSGRITCTGA 262
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SE +++AAR+YAR + K G
Sbjct: 263 TSESMAKVAARRYARCLGKLG 283
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIA-LHARNAEYNPKRFAAVIMRIR--EPRTTALIFSSGKMV 91
++ N++ T ++ + + + H NA Y P+ V ++R +P+ T IFS+G +
Sbjct: 292 RIVNVLGTCSMPWAIKIVNFSERHRENASYEPELHPGVTYKMRDPDPKATLKIFSTGSVT 351
Query: 90 CTGA 79
T A
Sbjct: 352 VTAA 355
>AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like factor
protein.
Length = 537
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V + ++ C L L++IAL N EY + V M++R P TTA I+SSG++ CTGA
Sbjct: 109 INNVVCSFSVGCHLKLREIALQGSNVEYRREN-GMVTMKLRHPYTTASIWSSGRITCTGA 167
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SE +++AAR+YAR + K G
Sbjct: 168 TSESMAKVAARRYARCLGKLG 188
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIA-LHARNAEYNPKRFAAVIMRIR--EPRTTALIFSSGKMV 91
++ N++ T ++ + + + H NA Y P+ V ++R +P+ T IFS+G +
Sbjct: 197 RIVNVLGTCSMPWAIKIVNFSERHRENASYEPELHPGVTYKMRDPDPKATLKIFSTGSVT 256
Query: 90 CTGA 79
T A
Sbjct: 257 VTAA 260
>AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box
binding protein-relatedfactor 2 protein.
Length = 632
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V + ++ C L L++IAL N EY + V M++R P TTA I+SSG++ CTGA
Sbjct: 204 INNVVCSFSVGCHLKLREIALQGSNVEYRREN-GMVTMKLRHPYTTASIWSSGRITCTGA 262
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SE +++AAR+YAR + K G
Sbjct: 263 TSESMAKVAARRYARCLGKLG 283
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIA-LHARNAEYNPKRFAAVIMRIR--EPRTTALIFSSGKMV 91
++ N++ T ++ + + + H NA Y P+ V ++R +P+ T IFS+G +
Sbjct: 292 RIVNVLGTCSMPWAIKIVNFSERHRENASYEPELHPGVTYKMRDPDPKATLKIFSTGSVT 351
Query: 90 CTGA 79
T A
Sbjct: 352 VTAA 355
>AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-PD,
isoform D protein.
Length = 632
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V + ++ C L L++IAL N EY + V M++R P TTA I+SSG++ CTGA
Sbjct: 204 INNVVCSFSVGCHLKLREIALQGSNVEYRREN-GMVTMKLRHPYTTASIWSSGRITCTGA 262
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SE +++AAR+YAR + K G
Sbjct: 263 TSESMAKVAARRYARCLGKLG 283
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIA-LHARNAEYNPKRFAAVIMRIR--EPRTTALIFSSGKMV 91
++ N++ T ++ + + + H NA Y P+ V ++R +P+ T IFS+G +
Sbjct: 292 RIVNVLGTCSMPWAIKIVNFSERHRENASYEPELHPGVTYKMRDPDPKATLKIFSTGSVT 351
Query: 90 CTGA 79
T A
Sbjct: 352 VTAA 355
>AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-PA,
isoform A protein.
Length = 632
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = -3
Query: 258 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 79
+ N+V + ++ C L L++IAL N EY + V M++R P TTA I+SSG++ CTGA
Sbjct: 204 INNVVCSFSVGCHLKLREIALQGSNVEYRREN-GMVTMKLRHPYTTASIWSSGRITCTGA 262
Query: 78 KSEEDSRLAARKYARIIQKXG 16
SE +++AAR+YAR + K G
Sbjct: 263 TSESMAKVAARRYARCLGKLG 283
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -3
Query: 261 QLQNIVSTVNLDCKLDLKKIA-LHARNAEYNPKRFAAVIMRIR--EPRTTALIFSSGKMV 91
++ N++ T ++ + + + H NA Y P+ V ++R +P+ T IFS+G +
Sbjct: 292 RIVNVLGTCSMPWAIKIVNFSERHRENASYEPELHPGVTYKMRDPDPKATLKIFSTGSVT 351
Query: 90 CTGA 79
T A
Sbjct: 352 VTAA 355
>AY864367-1|AAX38005.1| 574|Drosophila melanogaster scavenger
receptor protein.
Length = 574
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = -2
Query: 451 YAHICTNSQLCNSATDDAASNSTKYDVSDDSCRKSIKSTNAKPS*SCPNDSSDTTLCRPW 272
Y CT L + D ++ T S + RKS +T + + +S TT RP
Sbjct: 320 YLEECTKELLTTTEDDISSVPPTVTSTSTSTTRKSTTTTTTTTTTTTTTSTSTTTTKRPT 379
Query: 271 NFTTVTK 251
TT TK
Sbjct: 380 TTTTTTK 386
>AY118689-1|AAM50549.1| 893|Drosophila melanogaster AT15637p
protein.
Length = 893
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3
Query: 360 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQ 259
AA SSQQ + S A TP P+S PG L Q
Sbjct: 283 AAAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQ 316
>AE013599-3102|AAM68188.1| 889|Drosophila melanogaster CG10543-PB,
isoform B protein.
Length = 889
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3
Query: 360 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQ 259
AA SSQQ + S A TP P+S PG L Q
Sbjct: 283 AAAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQ 316
>AE013599-3101|AAO41340.1| 1024|Drosophila melanogaster CG10543-PC,
isoform C protein.
Length = 1024
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3
Query: 360 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQ 259
AA SSQQ + S A TP P+S PG L Q
Sbjct: 418 AAAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQ 451
>AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-PA,
isoform A protein.
Length = 1634
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3
Query: 360 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQ 259
AA SSQQ + S A TP P+S PG L Q
Sbjct: 1028 AAAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQ 1061
>AY865073-2|AAW79477.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/67 (29%), Positives = 27/67 (40%)
Frame = -2
Query: 451 YAHICTNSQLCNSATDDAASNSTKYDVSDDSCRKSIKSTNAKPS*SCPNDSSDTTLCRPW 272
Y CT L + D ++ T S + RKS +T + +S TT RP
Sbjct: 377 YLEECTKEMLTTTEDDISSVPPTVTSTSTSTTRKSTTTTTTSTT-----STSTTTTKRPT 431
Query: 271 NFTTVTK 251
TT TK
Sbjct: 432 TTTTTTK 438
>AY865065-2|AAW79462.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = -2
Query: 451 YAHICTNSQLCNSATDDAASNSTKYDVSDDSCRKSIKSTNAKPS*SCPNDSSDTTLCRPW 272
Y CT L + D ++ T +S + RKS +T + +S TT RP
Sbjct: 377 YLEECTKELLTTTEDDISSLPPTVTSISTSTTRKSTTTTTTSTT-----TTSTTTTKRPT 431
Query: 271 NFTTVTK 251
TT TK
Sbjct: 432 TTTTTTK 438
>AY865061-2|AAW79454.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = -2
Query: 451 YAHICTNSQLCNSATDDAASNSTKYDVSDDSCRKSIKSTNAKPS*SCPNDSSDTTLCRPW 272
Y CT L + D ++ T +S + RKS +T + +S TT RP
Sbjct: 377 YLEECTKELLTTTEDDISSLPPTVTSISTSTTRKSTTTTTTSTT-----TTSTTTTKRPT 431
Query: 271 NFTTVTK 251
TT TK
Sbjct: 432 TTTTTTK 438
>AY865059-1|AAW79451.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = -2
Query: 451 YAHICTNSQLCNSATDDAASNSTKYDVSDDSCRKSIKSTNAKPS*SCPNDSSDTTLCRPW 272
Y CT L + D ++ T +S + RKS +T + +S TT RP
Sbjct: 377 YLEECTKELLTTTEDDISSLPPTVTSISTSTTRKSTTTTTTSTT-----TTSTTTTKRPT 431
Query: 271 NFTTVTK 251
TT TK
Sbjct: 432 TTTTTTK 438
>AY865074-2|AAW79479.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/67 (29%), Positives = 27/67 (40%)
Frame = -2
Query: 451 YAHICTNSQLCNSATDDAASNSTKYDVSDDSCRKSIKSTNAKPS*SCPNDSSDTTLCRPW 272
Y CT L + D ++ T S + RKS +T + +S TT RP
Sbjct: 377 YLEECTKEMLTTTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTT-----TTSTTTTKRPT 431
Query: 271 NFTTVTK 251
TT TK
Sbjct: 432 TTTTTTK 438
>AY865072-1|AAW79476.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/67 (29%), Positives = 27/67 (40%)
Frame = -2
Query: 451 YAHICTNSQLCNSATDDAASNSTKYDVSDDSCRKSIKSTNAKPS*SCPNDSSDTTLCRPW 272
Y CT L + D ++ T S + RKS +T + +S TT RP
Sbjct: 377 YLEECTKEMLTTTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTT-----TTSTTTTKRPT 431
Query: 271 NFTTVTK 251
TT TK
Sbjct: 432 TTTTTTK 438
>AE013599-203|AAM70811.1| 352|Drosophila melanogaster CG15909-PA
protein.
Length = 352
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/59 (35%), Positives = 26/59 (44%)
Frame = -3
Query: 342 SQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPK 166
SQQ S P L P A PG +L N+ D L L+ I LHA A+ P+
Sbjct: 210 SQQSNSHLETHP-NQLAP--APPGATQKLDNVQMAPKEDKPLTLEHIELHAYTAQSAPR 265
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,559,507
Number of Sequences: 53049
Number of extensions: 434602
Number of successful extensions: 1901
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1893
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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