Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_L04
         (512 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    25   0.61 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   1.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.9  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    21   9.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.9  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    21   9.9  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    21   9.9  

>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 384 VEFEAASSVAELHSWL 431
           +EF+  +SV ELHSW+
Sbjct: 80  MEFDDWTSVMELHSWM 95



 Score = 24.2 bits (50), Expect = 0.80
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 132 PRTTALIFSSGKMVC 88
           P TT L+FSSG + C
Sbjct: 145 PPTTCLVFSSGSVSC 159


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 279 DPGILPQLQNIVSTVNLD 226
           +P I+P++QN   T N D
Sbjct: 640 EPPIMPRVQNATDTTNFD 657


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 436 TNSQLCNSATDDAASNST 383
           TNS  C+  +D+A  +ST
Sbjct: 263 TNSVTCDRPSDEAEPSST 280


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 154 CNYENKGTENNSFNFLIW 101
           CNY N    NN++  L +
Sbjct: 311 CNYSNNYYNNNNYKKLYY 328


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 136 PYSHNYSGKTFGIILSIT 189
           PY  N  GKTF +   +T
Sbjct: 91  PYRCNICGKTFAVPARLT 108


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 90  CTGAKSEEDSRLAARKY 40
           C    ++ED  + ARKY
Sbjct: 99  CVSKAADEDECMVARKY 115


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 90  CTGAKSEEDSRLAARKY 40
           C    ++ED  + ARKY
Sbjct: 99  CVSKAADEDECMVARKY 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,022
Number of Sequences: 438
Number of extensions: 2503
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)