Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_K24
         (782 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.2  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   3.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   3.2  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   4.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   4.2  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   4.2  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   9.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.8  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -3

Query: 309 ILSFFICWAWYY 274
           +++FFICWA ++
Sbjct: 266 VITFFICWAPFH 277


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 309 ILSFFICWAWYY 274
           I  FFICW  YY
Sbjct: 266 IAVFFICWTPYY 277



 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 358 CWWPYCLWSHWLG*DLNT 305
           CW PY + S W   D N+
Sbjct: 272 CWTPYYVMSLWYWIDRNS 289


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 351 HQHYQWSYLAHGHRVPSHQGQHG 419
           HQH+   Y  H HR  S   QHG
Sbjct: 319 HQHHPSQY--HPHRGSSPHHQHG 339


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 101 IKKNFITSYRLTTTTDYAYIFSLSDR 178
           IK+N   S R+  T    Y+ +LSDR
Sbjct: 357 IKQNVPQSGRVNNTQRNEYLLALSDR 382


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -3

Query: 309 ILSFFICWAWYY 274
           +++FFICWA ++
Sbjct: 291 VVAFFICWAPFH 302


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 333 VIGLAKI*ILSFFICWAWYY 274
           VI +    ++ FFICWA ++
Sbjct: 268 VIKMLSAVVILFFICWAPFH 287


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = -2

Query: 88  VMQYCNLWLHIILGDRRLCISVCTVFLFV 2
           V+ + + WLH+     R+ +   T+  F+
Sbjct: 247 VISWVSFWLHMDASPPRIVLGTNTILTFM 275


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 249 KNHEVTKYCSTKPNI*KMKVFKS*PSQ*LH 338
           K HE T  C  KP   +  ++K+     LH
Sbjct: 2   KEHEATGTCQKKPTKLRNLIYKTEAFDSLH 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,249
Number of Sequences: 438
Number of extensions: 4335
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)