Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_K23
(692 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 217 9e-57
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 206 1e-53
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 169 1e-42
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 167 6e-42
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 98 7e-21
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 91 6e-19
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 89 4e-18
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 86 2e-17
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 77 1e-14
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2) 37 0.013
SB_24760| Best HMM Match : PT (HMM E-Value=0.17) 31 0.67
SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_43689| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_3760| Best HMM Match : SVA (HMM E-Value=0.19) 30 1.5
SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085) 29 2.7
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_41511| Best HMM Match : SAP (HMM E-Value=2.7e-08) 29 3.6
SB_41509| Best HMM Match : Exo_endo_phos (HMM E-Value=4.7e-05) 29 3.6
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 28 8.3
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 217 bits (529), Expect = 9e-57
Identities = 94/125 (75%), Positives = 109/125 (87%)
Frame = -3
Query: 690 TGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSM 511
T EKGFGYKGS FHR+IP FM QGGDFT HNGTGGKSIYG KFEDENF LKHTG GVLSM
Sbjct: 174 THEKGFGYKGSSFHRIIPQFMCQGGDFTKHNGTGGKSIYGAKFEDENFVLKHTGAGVLSM 233
Query: 510 ANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKD 331
AN+G +TNGSQFF+TT KT WLDG+HVVFGNV+EG +VV+++E GSQSGK SK++VI D
Sbjct: 234 ANSGPNTNGSQFFLTTEKTDWLDGKHVVFGNVIEGFDVVRKMEAVGSQSGKASKKVVIDD 293
Query: 330 CGQIA 316
CG+++
Sbjct: 294 CGELS 298
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 206 bits (504), Expect = 1e-53
Identities = 93/124 (75%), Positives = 104/124 (83%)
Frame = -3
Query: 690 TGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSM 511
TGEKGFGYKGS FHRVIP FM QGGDFT +GTGGKSIYG KF DENF LKHTGPG+LSM
Sbjct: 40 TGEKGFGYKGSSFHRVIPGFMCQGGDFTRGDGTGGKSIYGAKFADENFNLKHTGPGILSM 99
Query: 510 ANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKD 331
ANAG TNGSQFF+ T KTSWLDG+HVVFG+V +GM+VVK+IE GS SGKTSK++VI D
Sbjct: 100 ANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKIEKVGSDSGKTSKKVVIAD 159
Query: 330 CGQI 319
+
Sbjct: 160 SASV 163
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 169 bits (412), Expect = 1e-42
Identities = 75/101 (74%), Positives = 86/101 (85%)
Frame = -3
Query: 684 EKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMAN 505
E+GFGYK SIFHRVI NFM+QGGDFTN +GTGG SIYG F+DENF LKH GPG L MAN
Sbjct: 65 EQGFGYKDSIFHRVIKNFMIQGGDFTNKDGTGGYSIYGKYFDDENFNLKHYGPGWLCMAN 124
Query: 504 AGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 382
AG +TNGSQF+ITT+KTSWLDG H FG V+EGM+VV++IE
Sbjct: 125 AGKNTNGSQFYITTIKTSWLDGSHTCFGKVLEGMDVVRRIE 165
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 167 bits (407), Expect = 6e-42
Identities = 76/96 (79%), Positives = 83/96 (86%)
Frame = -3
Query: 684 EKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMAN 505
+KGFGYK SIFHRVI +FM+QGGDFT +GTGGKSIYG KF DENF L+H G G LSMAN
Sbjct: 84 QKGFGYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADENFKLQHYGAGWLSMAN 143
Query: 504 AGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEV 397
AG DTNGSQFFITTVKT WLDGRHVVFG V++GMEV
Sbjct: 144 AGKDTNGSQFFITTVKTPWLDGRHVVFGKVLKGMEV 179
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 97.9 bits (233), Expect = 7e-21
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Frame = -3
Query: 600 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 424
+GTGG+SI+G +FEDE + L+H P +SMANAG +TNGSQFFIT V T WLD +H VF
Sbjct: 2 DGTGGESIWGGEFEDEFHRNLRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVF 61
Query: 423 GNVVEGMEVVKQI 385
G VV+GM+V +QI
Sbjct: 62 GRVVKGMDVAQQI 74
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = -3
Query: 540 KHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 361
+H PG+LSMAN+G +TNGSQFFITTV T LDGRHVVFG V++GM+VV+++E
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELEATPVDDS 247
Query: 360 KTSKRIVIKDCGQIA 316
+I++CG++A
Sbjct: 248 SPKSPCIIEECGELA 262
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 89.0 bits (211), Expect = 3e-18
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = -3
Query: 513 MANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIK 334
MANAG DTNGSQFFITTVKTSWLDG+HVVFG V+EGM+VV+++E + K +I
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLENVNVKGSTPVKTCMID 60
Query: 333 DCGQI 319
D G +
Sbjct: 61 DSGTL 65
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 88.6 bits (210), Expect = 4e-18
Identities = 39/91 (42%), Positives = 57/91 (62%)
Frame = -3
Query: 597 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 418
G GG+S+YG FEDE+F++ H GV+ MAN G TNGSQF+IT W+D ++V FG
Sbjct: 46 GIGGESVYGPLFEDEDFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQ 105
Query: 417 VVEGMEVVKQIETFGSQSGKTSKRIVIKDCG 325
V+EG+ V+ +E + + + + DCG
Sbjct: 106 VIEGLNVLDVLEGQETFNERPKVECRVADCG 136
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 86.2 bits (204), Expect = 2e-17
Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = -3
Query: 600 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 421
NGTGG+SIYG F DE F KH P +LSMAN G +TNGSQFFI HVVFG
Sbjct: 25 NGTGGESIYGGTFGDECFEFKHERPMLLSMANRGPNTNGSQFFII----------HVVFG 74
Query: 420 NVVEGMEVVKQIETF-GSQSGKTSKRIVIKDCGQI 319
+V++G E+V+QIE+ ++ + + + + +CG++
Sbjct: 75 HVIQGEELVRQIESLPTNEKNRPNADVKVSNCGEL 109
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = -3
Query: 522 VLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 385
+LSMANAG TNGSQFF+ T KTSWLDG+HVVFG+V +GM+VVK++
Sbjct: 2 ILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKM 47
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 52.0 bits (119), Expect = 4e-07
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Frame = -3
Query: 669 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA-D 493
Y G+ FHRVIP FM+QGG F + + ++E H G L+MA D
Sbjct: 60 YAGTQFHRVIPGFMVQGGGF---DADMQQKDTQAPIKNEADNGLHNVRGTLAMARTQVRD 116
Query: 492 TNGSQFFITTVKTSWLDG-----RHVVFGNVVEGMEVVKQI 385
+ SQFFI ++LD + VFG VV+GM+VV +I
Sbjct: 117 SATSQFFINHKDNAFLDHGSRDFGYAVFGKVVKGMDVVDKI 157
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = -3
Query: 537 HTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 421
H G +SMAN G ++NGSQFFI K LD ++ +FG
Sbjct: 301 HNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFG 339
>SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2)
Length = 175
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/40 (35%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = -3
Query: 435 HVVFGNVVEGMEVVKQIETF-GSQSGKTSKRIVIKDCGQI 319
HVVFG+V++G E+V+QIE+ ++ + + + + +CG++
Sbjct: 3 HVVFGHVIQGEELVRQIESLPTNEKNRPNADVKVSNCGEL 42
>SB_24760| Best HMM Match : PT (HMM E-Value=0.17)
Length = 422
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +2
Query: 395 TTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 532
TT PST P T PS+ E +T WEP P PGP
Sbjct: 34 TTGEPSTWEPMTGA-PSTWEPMTGAPSTWEPWTDGPGPYPTDGPGP 78
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 422 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 532
P TT PS+ E +T WEP+ AP+ T GP
Sbjct: 32 PFTTGEPSTWEPMTGAPSTWEPMTGAPSTWEPWTDGP 68
>SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 392 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 532
L+ + + FP TT P + + T + EPL+ P +R P P
Sbjct: 13 LSATQLTAAFPTTTTTPVTTQTTTTDVSRTEPLIELPTAQEKRKPCP 59
>SB_43689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 416
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 149 IYFHALLVCSLLHFCYYIFISTSSLAVCLDLNNSHYR-RPLFISTYYAS 6
+ F A+++C +LH IF L VC++L +Y+ R +F+ Y S
Sbjct: 137 VEFKAMIICLILHLLLLIF----ELLVCINLGGRNYQWRIMFMPLYVLS 181
>SB_3760| Best HMM Match : SVA (HMM E-Value=0.19)
Length = 259
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Frame = +2
Query: 419 FPKTTCLPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 532
FP+ + LP S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPSLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1110
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = +2
Query: 419 FPKTTCLPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 532
FP+ LP S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPPLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085)
Length = 512
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +1
Query: 325 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEE 477
T V +N + PR A +GL D F+ K+ MS I+PGG D +EE
Sbjct: 431 TKVPENVQPKPKPRRAGEGLPHSDFKSGFSY--KEYMSGIRPGGPDMEEEE 479
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +2
Query: 374 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 553
P+ TTS PST+ P+T ++ T N AP+ + RT + LR
Sbjct: 87 PRTGSTTTTSAPSTSTPRTGSTTTTSAPSTSTTSN--STTRAPSTSTPRTGSTITLRTST 144
Query: 554 SS 559
+S
Sbjct: 145 TS 146
>SB_41511| Best HMM Match : SAP (HMM E-Value=2.7e-08)
Length = 993
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 158 GYCIYFHALLVCSLLHFCYYIFISTSSLAVCLDLNNSHYRRPLFISTYY 12
G C+Y S +++C + S AVC+++ H RP F+S Y
Sbjct: 525 GVCLYLR-----SSINYCIRNLVPDSVEAVCVEITKPH-SRPFFVSIIY 567
>SB_41509| Best HMM Match : Exo_endo_phos (HMM E-Value=4.7e-05)
Length = 670
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 158 GYCIYFHALLVCSLLHFCYYIFISTSSLAVCLDLNNSHYRRPLFISTYY 12
G C+Y S +++C + S AVC+++ H RP F+S Y
Sbjct: 406 GVCLYLR-----SSINYCIRNLVPDSVEAVCVEITKPH-SRPFFVSIIY 448
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +2
Query: 362 PDWLPKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 532
P P + TT+ P TT P+TT P + T + P + P +T P
Sbjct: 1767 PPHSPPTTTTTTTTTPETTAPRTT-TPETTTPETTTPRTTTPETTKPRTTTPKTTTP 1822
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,930,373
Number of Sequences: 59808
Number of extensions: 451889
Number of successful extensions: 1256
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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