Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_K22
         (877 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   8.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   8.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   8.5  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   8.5  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +2

Query: 641 YFFKSCVYSIIKDVTSARYKH 703
           Y+F + +  I+ +V SA+Y++
Sbjct: 305 YYFSTTINPILYNVMSAKYRN 325


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 42  QIRNSQISSKIRHCSHAXTXPNALLQXCNVFXFLDQPTQQ 161
           +I NSQ +  +RH         A+L   N    + +PT++
Sbjct: 339 KINNSQNALVLRHVQAEAEKHAAMLYQYNFNIIISEPTER 378


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 230 ISKFPYWKLLHTYRVHLAGWFSVLLSW 150
           +SK  Y  L+H Y    +  + VL SW
Sbjct: 245 LSKDDYESLVHLYTRDQSETYDVLRSW 271


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 504 HHYLHIMVGLDHFCARRPP 560
           HH+ H    L H   R+PP
Sbjct: 352 HHHHHQTQSLQHLHYRQPP 370


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,300
Number of Sequences: 438
Number of extensions: 4427
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)