Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_K16
         (783 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-2|CAA16400.1|  606|Caenorhabditis elegans Hypothetical ...    38   0.008
Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical pr...    38   0.011
U41023-1|AAA82340.1|  569|Caenorhabditis elegans Hypothetical pr...    34   0.13 
U97009-4|AAC69035.1|  336|Caenorhabditis elegans Seven tm recept...    30   2.1  
U28735-4|AAF99953.1|  488|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AL021497-3|CAA16405.1|  613|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z81099-3|CAB03186.3|  490|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AC006722-5|AAK68410.3|  703|Caenorhabditis elegans Hypothetical ...    28   8.7  
AC006645-10|AAF39849.1|  746|Caenorhabditis elegans Hypothetical...    28   8.7  

>AL021497-2|CAA16400.1|  606|Caenorhabditis elegans Hypothetical
           protein Y51A2D.4 protein.
          Length = 606

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = -3

Query: 757 LSSAIGLSFTYFLYAGIVTICMVVVWIMLPETKDXTLQEIEDRF 626
           L+  IG    ++LYAG+  I  + +  ++PETK  +++E+E  F
Sbjct: 524 LTQVIGKYGAFWLYAGLTVIAFIFILFLVPETKGYSIEEVEMLF 567


>Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical
           protein M01F1.5 protein.
          Length = 604

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 20/59 (33%), Positives = 32/59 (54%)
 Frame = -3

Query: 766 FPVLSSAIGLSFTYFLYAGIVTICMVVVWIMLPETKDXTLQEIEDRFRGYTAEDVKSSQ 590
           F  LS A     T+F+Y G   + +V V+  +PETK  ++ E+E  F   T E+ + +Q
Sbjct: 525 FLSLSQAATKYGTFFIYCGCTMVALVFVFFFVPETKGYSIDEVEMLF--MTKEERRKAQ 581


>U41023-1|AAA82340.1|  569|Caenorhabditis elegans Hypothetical
           protein F53H8.3 protein.
          Length = 569

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 15/57 (26%), Positives = 34/57 (59%)
 Frame = -3

Query: 745 IGLSFTYFLYAGIVTICMVVVWIMLPETKDXTLQEIEDRFRGYTAEDVKSSQPLNAA 575
           +G++F+YF +   + +  + ++++LPET+D  + EI       TA  + + +P +A+
Sbjct: 484 VGITFSYFPFIIGLAVFGIFIYVLLPETRDRPMVEIVTEVHHRTA-SLSAGRPWDAS 539


>U97009-4|AAC69035.1|  336|Caenorhabditis elegans Seven tm receptor
           protein 32 protein.
          Length = 336

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 484 NRNYIKYSVTFQKVLWQSYVFFLKRIFIYFLYFC 383
           N   +KY  T++ V+W  YVF +   + + +YFC
Sbjct: 121 NDEKLKYFNTWRCVVWFLYVFLIGMGWSFMIYFC 154


>U28735-4|AAF99953.1|  488|Caenorhabditis elegans Hypothetical
           protein F48E3.2 protein.
          Length = 488

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = -3

Query: 727 YFLYAGIVTICMVVVWIMLPETKDXTLQEIEDRFRGYTAEDVKSSQPLNAANGGG 563
           +F+  GI+ I M++++  LPETKD  +  I ++ R   A+  K SQ L      G
Sbjct: 433 FFVIPGILCIIMLILY--LPETKDKHINVIVEQLRETKAKR-KESQKLETEESIG 484


>AL021497-3|CAA16405.1|  613|Caenorhabditis elegans Hypothetical
           protein Y51A2D.5 protein.
          Length = 613

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -3

Query: 757 LSSAIGLSFTYFLYAGIVTICMVVVWIMLPETKDXTLQEIEDRF 626
           L+ AI     ++LYA    I  + ++ ++PET   ++ E+E  F
Sbjct: 532 LTHAITKYGAFWLYAIFTIIAFIFIYFLVPETTGYSIDEVEMLF 575


>Z81099-3|CAB03186.3|  490|Caenorhabditis elegans Hypothetical
           protein K08F9.1 protein.
          Length = 490

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -3

Query: 766 FPVLSSAIGLSFTYF-LYAGIVTICMVVVWIMLPETKDXTLQEIED 632
           F  + + +G +++Y  L+   V + +V ++  LPETK+ +  E+E+
Sbjct: 423 FLPMKNQLGEAWSYLILFVAPVAVSLVFLYFSLPETKNKSPIEVEE 468


>AC006722-5|AAK68410.3|  703|Caenorhabditis elegans Hypothetical
           protein Y19D10A.10 protein.
          Length = 703

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = -3

Query: 769 CFPV----LSSAIGLSFTYFLYAGIVTICMVVVWI 677
           C PV      SA+G    Y+L+ G+  I  +V WI
Sbjct: 434 CMPVSGLLCESALGWRSIYYLFGGLTFIMFIVFWI 468


>AC006645-10|AAF39849.1|  746|Caenorhabditis elegans Hypothetical
           protein F56A4.11 protein.
          Length = 746

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = -3

Query: 769 CFPV----LSSAIGLSFTYFLYAGIVTICMVVVWI 677
           C PV      SA+G    Y+L+ G+  I  +V WI
Sbjct: 477 CMPVSGLLCESALGWRSIYYLFGGLTFIMFIVFWI 511


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,905,903
Number of Sequences: 27780
Number of extensions: 312348
Number of successful extensions: 668
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)