Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_K16
         (783 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    25   1.1  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    25   1.1  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    25   1.1  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    24   1.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    24   1.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   3.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   9.8  

>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 93  IIKKRTQYS*PKSTCYYPQXYRSDYRKRVIS 1
           I KK T++   +S   Y   Y  DY KRV+S
Sbjct: 130 IKKKTTRFQDSRSKDVYLIDYPEDYGKRVLS 160


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 93  IIKKRTQYS*PKSTCYYPQXYRSDYRKRVIS 1
           I KK T++   +S   Y   Y  DY KRV+S
Sbjct: 130 IKKKTTRFQDSRSKDVYLIDYPEDYGKRVLS 160


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 93  IIKKRTQYS*PKSTCYYPQXYRSDYRKRVIS 1
           I KK T++   +S   Y   Y  DY KRV+S
Sbjct: 130 IKKKTTRFQDSRSKDVYLIDYPEDYGKRVLS 160


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -3

Query: 301 GCYFNLIISNVMNRYIITVSVVTNVQRTLNIVLTTILKLY 182
           G + N+I+ NV  R     SV+ +++ +L +     LKLY
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLY 167


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -3

Query: 301 GCYFNLIISNVMNRYIITVSVVTNVQRTLNIVLTTILKLY 182
           G + N+I+ NV  R     SV+ +++ +L +     LKLY
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLY 167


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 680 PNYHHANRHNTSVQEVRERQP 742
           P +HH +    S+Q +  RQP
Sbjct: 349 PPHHHHHHQTQSLQHLHYRQP 369


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 241 VVTNVQRTLNIVLTTILKL 185
           VVTNV  T+N   T+++ +
Sbjct: 831 VVTNVTTTINTPTTSVISM 849


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,461
Number of Sequences: 438
Number of extensions: 4704
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)