Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_K14
(691 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11978| Best HMM Match : Myb_DNA-binding (HMM E-Value=8e-21) 32 0.50
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 31 0.67
SB_34512| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 30 1.5
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 4.7
SB_6388| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 29 4.7
SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34) 29 4.7
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 28 6.2
SB_55151| Best HMM Match : Adeno_shaft (HMM E-Value=6.4) 28 8.2
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046) 28 8.2
SB_48350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_11978| Best HMM Match : Myb_DNA-binding (HMM E-Value=8e-21)
Length = 636
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = -2
Query: 279 PHPECLHPPSFQCSSDGEVGPQVVPEARLQLPTHTAQV---EEASPQATPPPTVDP 121
PHP PP G+ P + P Q PT Q + SP PPP + P
Sbjct: 529 PHPNSSSPPVSSQGMPGQPPPLMKPSVVQQRPTFPNQSRMGQSGSPLQGPPPLIKP 584
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 31.9 bits (69), Expect = 0.50
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = -2
Query: 273 PECLHPPSFQCSSDGEVGPQ--VVPEARLQLPTHTAQVEEASPQATPPPTVDPDRTKNWK 100
PE PP + D V P+ +VPE+ L T A +P+ T P
Sbjct: 4526 PEATVPPETTKTPDTTVAPETTMVPESTLAPETTMAPETTVAPETTMAPETTVAAETTMA 4585
Query: 99 PETXMEIET 73
PET + ET
Sbjct: 4586 PETTVASET 4594
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = -2
Query: 273 PECLHPPSFQCSSDGEVGPQ--VVPEARLQLPTHTAQVEEASPQAT--PPPTVDPDRTKN 106
PE + P + + P+ V PE + T +P+ T P TV+P+ T +
Sbjct: 2769 PETTYEPETTAAPGTTLAPETTVAPETTYEPETTALPESTVAPETTMAPETTVEPETTLS 2828
Query: 105 WKPETXMEIETXSXXG 58
PET + ET G
Sbjct: 2829 --PETTVAPETTVALG 2842
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Frame = -2
Query: 273 PECLHPPSFQCSSDGEVGPQ--VVPEARLQLPTHTAQVEEASPQATPPPTVDPDRTKNWK 100
PE P + V P+ V PEA T A +PQ T P
Sbjct: 1061 PETTASPETTVEPETTVAPETTVTPEATAAPDTTVAPETTEAPQTTAAPETTAGPATTLV 1120
Query: 99 PETXMEIETXS 67
PET + ET +
Sbjct: 1121 PETTLAPETTA 1131
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Frame = -2
Query: 273 PECLHPPSFQCSSDGEVGPQ--VVPEARLQLPTHTAQVEEASPQATPPPTVDPDRTKNWK 100
PE P + + GP +VPE L T A P T P +
Sbjct: 1097 PETTEAPQTTAAPETTAGPATTLVPETTLAPETTAAPETTMVPDTTVAPDTTDAPVTTFV 1156
Query: 99 PETXMEIETXS 67
PET +ET +
Sbjct: 1157 PETTTALETTT 1167
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = -2
Query: 279 PHPECLHPPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPPTV 127
P P PPS S G P P + P+ +P A PPP+V
Sbjct: 473 PTPVAAPPPSVFAPSSGVPTPVAAPPPSVFAPSSGVPTTVTAPPAAPPPSV 523
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = -2
Query: 279 PHPECLHPPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPPTV 127
P P PPS SS G P P + + A+P PPP+V
Sbjct: 357 PPPVVAPPPSVFASSSGVPTPVKAPPPSVFASSSGVPTPVAAPPPAPPPSV 407
>SB_34512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1080
Score = 31.1 bits (67), Expect = 0.88
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = -1
Query: 643 QPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTE 464
Q E A A S V +P+R QT + S P+Q N+V PQ E P S T A LA+P E
Sbjct: 625 QHELAVADSP-VVCLPER--QTHSGESATPEQTNQVVEPQM-EEPQGS-TSAQHLAEPDE 679
Query: 463 K 461
+
Sbjct: 680 Q 680
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 31.1 bits (67), Expect = 0.88
Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Frame = -2
Query: 273 PECLHPPSFQCSSDGEVGPQVV--PEARLQLPTHTAQVEEASPQATPPPTVDPDRTKNWK 100
PE P + + + P+ PE + T A A+P+ T P
Sbjct: 589 PETTAAPETTAAPETTMAPETTTAPETTAKAETTVAPETSAAPETTAAPETTAAPETTMA 648
Query: 99 PETXMEIET 73
PET EIET
Sbjct: 649 PETTAEIET 657
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Frame = -2
Query: 273 PECLHPPSFQCSSDGEVGPQV--VPEARLQLPTHTAQVEEASPQATPPP--TVDPDRTKN 106
PE P + P+ VPE T A A+P+ T P T PD T
Sbjct: 835 PETTETPETTAVPETTAAPETTAVPETTAAPETTAAPETTAAPETTAAPETTAAPDTTA- 893
Query: 105 WKPETXMEIETXS 67
PET +ET +
Sbjct: 894 -APETTAALETTA 905
>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1468
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 207 PEARLQLPTHTAQVEEASPQATPPPTVDPDRTK 109
P+ + P T + PQ TP PT +P RTK
Sbjct: 357 PKHTTEPPRTTPEPTTEPPQTTPEPTTEPSRTK 389
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 219 PQVVPEARLQLPTHTAQVEEASPQATPPPTVDPDRTK 109
P+ PE + P T + + P PT +P RTK
Sbjct: 1094 PRTTPEPTTEPPRTTPEPTTEPSRTKPEPTTEPSRTK 1130
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -2
Query: 255 PSFQCSSDGEVGPQV--VPEARLQLPTHTAQVEEASPQAT--PPPTVDPDRTKNWKPETX 88
P S + V P+ VPE L T AQ A+P+ T P TV P+ +PET
Sbjct: 1806 PESTVSPETTVSPETTAVPETTLSPGTTVAQDTTAAPETTVAPETTVSPETIA--EPETT 1863
Query: 87 MEIETXS 67
+ ET +
Sbjct: 1864 VAPETTT 1870
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -2
Query: 210 VPEARLQLPTHTAQVEEASPQAT--PPPTVDPDRTKNWKPETXMEIET 73
VPE L T AQ A+P+ T P TV P+ T PET + +ET
Sbjct: 1507 VPETTLTPGTTVAQETTAAPETTVAPETTVAPETTV--VPETTVALET 1552
Score = 27.9 bits (59), Expect = 8.2
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -2
Query: 273 PECLHPPSFQCSSDGEVGPQ--VVPEARLQLPTHTAQVEEASPQAT--PPPTVDPDRTKN 106
PE P + + P+ +VPE T A A+P+ T P T+ P+ T
Sbjct: 489 PETTMAPESTLAPETTAAPEKTMVPETTAAPETTMAPETTAAPETTMAPETTIAPEATV- 547
Query: 105 WKPETXMEIETXS 67
PET M ET +
Sbjct: 548 -APETTMAPETTA 559
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Frame = -2
Query: 273 PECLHPPSFQCSSDGEVGPQVV--PEARLQLPTHTAQVEEASPQATPPPTVDPDRTKNWK 100
PE P + + V P+ PE + T A A+P+ T P +
Sbjct: 2205 PESTVAPETTVAPETTVAPETTMPPETTMAPETTVAAETTAAPETTVVPETTAAPETSAT 2264
Query: 99 PETXMEIETXS 67
PET M ET S
Sbjct: 2265 PETTMVPETTS 2275
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -2
Query: 219 PQVVPEARL-QLPTHTAQVEEASPQATPPPTVDPDRTKNWKPETXME 82
P+ +PE + + PT T + TPPP+ P K KP+ +E
Sbjct: 928 PEPLPEVDIMRSPTPTPPPSPPPKEPTPPPSSKPSPVKEIKPKKPIE 974
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = -2
Query: 273 PECLHPPSFQCSSDGEVGPQ--VVPEARLQLPTHTAQVEEASPQAT--PPPTVDPDRTKN 106
PE P + V P+ V PE + T A A+ +AT P TV P+ T
Sbjct: 460 PEITAAPDTTMVPESTVAPETTVAPETTVASETTVAPKTTAASEATLAPETTVAPETTA- 518
Query: 105 WKPETXMEIETXS 67
PE+ + +ET +
Sbjct: 519 -APESTLALETTA 530
>SB_6388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1520
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 276 HPECLHPPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPP 133
H C+ P F SS +GPQV+P + LQ+P Q + + PP
Sbjct: 1025 HDSCV--PGFPDSSP-ILGPQVLPTSVLQIPNKLGQGDAVLVEDEKPP 1069
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/54 (27%), Positives = 20/54 (37%)
Frame = +2
Query: 122 GSTVGGGVACGDASSTCAVCVGNCSRASGTTCGPTSPSEEHWKEGGCRHSGWGE 283
G G G G+ ++ G + SGTT G + E G SG E
Sbjct: 616 GVNTGSGTTTGEVNTGSGTTTGGMNTGSGTTTGGVNTGSGTTSESGTTTSGTTE 669
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = -2
Query: 273 PECLHPPSFQCSSDGEVGPQ--VVPEARLQLPTHTAQVEEASPQATPPPTVDPDRTKNWK 100
PE PP + D + P+ V E+ L L + A +P++T PP
Sbjct: 851 PETTVPPETTAAPDTTLAPETTVALESTLALESTVAPETTVAPESTVPPETTVATETTVA 910
Query: 99 PETXMEIET 73
PET E+
Sbjct: 911 PETTAAPES 919
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = -2
Query: 213 VVPEARLQLPTHTAQVEEASPQATPPPTVDPDRTKNWKPETXMEIETXS 67
+ PE L T A A+P+ T PP + PET + ET +
Sbjct: 1600 LAPETTAALETTVAPETTAAPETTVPPEITAATETTAAPETTVGPETTA 1648
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Frame = -2
Query: 273 PECLHPPSFQCSSDGEVGPQ--VVPEARLQLPTHTAQVEEASPQATPPPTVDPDRTKNWK 100
PE P + V P+ V PEA T A +PQ T P
Sbjct: 2576 PETTASPETTVEPETTVAPETTVTPEATAAPDTTVAPETTEAPQTTAAPETTAGPATTLV 2635
Query: 99 PETXMEIETXS 67
PET + ET +
Sbjct: 2636 PETTLAPETTA 2646
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Frame = -2
Query: 273 PECLHPPSFQCSSDGEVGPQ--VVPEARLQLPTHTAQVEEASPQATPPPTVDPDRTKNWK 100
PE P + + GP +VPE L T A P T P +
Sbjct: 2612 PETTEAPQTTAAPETTAGPATTLVPETTLAPETTAAPETTMVPDTTVAPDTTDAPVTTFV 2671
Query: 99 PETXMEIETXS 67
PET +ET +
Sbjct: 2672 PETTTALETTT 2682
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -2
Query: 213 VVPEARLQLPTHTAQVEEASPQAT--PPPTVDPDRTKNWKPETXMEIET 73
V PE + T +A V +P++T P TV PD T PET + ET
Sbjct: 1678 VAPETTVAPETTSAPVTTVAPESTLVPETTVAPDTTV--APETTVVPET 1724
>SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34)
Length = 1790
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 137 GGVACGDASSTCAVCVGNCSRASGTTCGPTSPSEEHWKE 253
G CG +C+ C G C ++G C P ++ +E
Sbjct: 97 GRYYCGRQVLSCSCCDGFCGTSNGCNCPPCQKLDQEERE 135
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/70 (28%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = -2
Query: 690 TTPELWAVAXPRSCTA-SPKPHRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQR 514
TTPE PR+ T + KP + AA+ P+P T+ T N
Sbjct: 1795 TTPE---TTTPRTTTPETTKPRTTTPKTTTPKKTTAAKKAPLPVTHATTSHAPSTTENPT 1851
Query: 513 TRSSAPLKRP 484
T A K P
Sbjct: 1852 TARPATTKAP 1861
>SB_55151| Best HMM Match : Adeno_shaft (HMM E-Value=6.4)
Length = 402
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = -2
Query: 267 CLHPPSFQCSSDGEVGPQVVPEARLQLPTH----TAQVEEASPQATPPPTVDPDRTKNWK 100
C P S DG + + P+A P H T V E + T PP + P + W+
Sbjct: 305 CSPPHSTTDREDGTLVERHAPQAPRSGPGHDKRRTVTVRERESKPTFPPPLKPSPNRRWR 364
>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
Length = 797
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2
Query: 219 PQVVPEARLQLPTHTAQVEEASPQATPPPTVDPDR 115
P+V+ R LPT+T+ E SP+ TP PT R
Sbjct: 485 PRVLHSPRTPLPTYTSPREHHSPR-TPLPTYTSPR 518
>SB_48350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 883
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = -2
Query: 171 QVEEASPQATPPPTVDPDRTKNWKPETXMEIETXSXXGE 55
++ P+ PPP T PET ++ET + E
Sbjct: 817 ELSSRKPEVVPPPAEMESSTTTQSPETPAQVETPNAVAE 855
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,899,318
Number of Sequences: 59808
Number of extensions: 416789
Number of successful extensions: 2284
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2257
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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