Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_K14
(691 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (AB... 34 0.10
At5g66060.1 68418.m08323 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 2.2
At5g16220.1 68418.m01895 octicosapeptide/Phox/Bem1p (PB1) domain... 29 2.2
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 29 2.9
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 29 2.9
At1g20270.1 68414.m02531 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 2.9
At5g01730.1 68418.m00091 expressed protein 29 3.8
At3g57170.1 68416.m06365 N-acetylglucosaminyl transferase compon... 28 5.1
At3g54100.1 68416.m05981 expressed protein similar to axi 1 [Nic... 28 5.1
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 28 5.1
At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearl... 28 6.7
At3g50890.1 68416.m05572 zinc finger homeobox family protein / Z... 27 8.9
At3g26910.1 68416.m03367 hydroxyproline-rich glycoprotein family... 27 8.9
At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-conta... 27 8.9
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 27 8.9
At1g11100.1 68414.m01271 SNF2 domain-containing protein / helica... 27 8.9
At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger) fa... 23 9.8
>At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (ABI3)
identical to abscisic acid-insensitive protein 3
GI:16146 SP:Q01593 from [Arabidopsis thaliana], (Plant
Cell 4 (10), 1251-1261 (1992))
Length = 720
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = -2
Query: 225 VGPQVVPEARLQLPTHTAQVEEASPQATPPPTVDPDRTKNWKPE 94
V PQ+ P QLPT S A P V PDR + WKPE
Sbjct: 525 VPPQLPPVMETQLPTMD---RAGSASAMPRQQVVPDRRQGWKPE 565
>At5g66060.1 68418.m08323 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to prolyl 4-hydroxylase, alpha
subunit, from Rattus norvegicus [GI:474940], Mus
musculus [SP|Q60715], Homo sapiens [GI:18073925];
contains PF03171 2OG-Fe(II) oxygenase superfamily domain
Length = 267
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 630 HRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLKR 487
H L + C YLI A+P +T ++KT T S RT S L R
Sbjct: 91 HNFLTKEECKYLIELAKPHMEKSTVVDEKTGKSTDSRVRTSSGTFLAR 138
>At5g16220.1 68418.m01895 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein hypothetical proteins -
Arabidopsis thaliana contains Pfam profile PF00564: PB1
domain
Length = 476
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -1
Query: 667 GMXAFMYR-QPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPE-NPIF 503
G FM + Q + Q TGQ YI TL T+Y N VYY + P+ PI+
Sbjct: 317 GYPPFMNQAQQQHIQVIYTGQPYITGNSPMTLPATAY--HHTNHVYYQRPPQPYPIY 371
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = -2
Query: 258 PPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPPTVDPDRTKN 106
P F + V P+ V A PT A + A ATPPPTV T N
Sbjct: 942 PIGFTPMATPGVAPRSVQPA--SPPTQQAAAQAAPAPATPPPTVQTADTSN 990
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = -2
Query: 258 PPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPPTVDPDRTKN 106
P F + V P+ V A PT A + A ATPPPTV T N
Sbjct: 944 PIGFTPMATPGVAPRSVQPA--SPPTQQAAAQAAPAPATPPPTVQTADTSN 992
>At1g20270.1 68414.m02531 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to prolyl 4-hydroxylase, alpha
subunit, from Gallus gallus [GI:212530], Rattus
norvegicus [GI:474940], Mus musculus [SP|Q60715];
contains PF03171 2OG-Fe(II) oxygenase superfamily domain
Length = 287
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -2
Query: 630 HRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLKR 487
H L + C YLI A+P + +T + +T S RT S L+R
Sbjct: 89 HNFLSKEECEYLISLAKPHMVKSTVVDSETGKSKDSRVRTSSGTFLRR 136
>At5g01730.1 68418.m00091 expressed protein
Length = 1192
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 237 SDGEVGPQVVPEARLQLPTHTAQVEEASPQATPP-PTVDPDRTKNWKPETXMEIETXSXX 61
+D E V PE+ L L T + +A+P+ TPP P + P T+ W + E S
Sbjct: 887 TDEEDFLNVSPESILPLSTSLHETPQANPEITPPLPPLPP--TQWWMGKLVESTEMPSLA 944
Query: 60 G 58
G
Sbjct: 945 G 945
>At3g57170.1 68416.m06365 N-acetylglucosaminyl transferase component
family protein / Gpi1 family protein similar to
SP|O14357 N-acetylglucosaminyl-phosphatidylinositol
biosynthetic protein gpi1 {Schizosaccharomyces pombe};
contains Pfam profile PF05024: N-acetylglucosaminyl
transferase component (Gpi1)
Length = 560
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 537 SITLSNQRTRSSAPLKRPSWLTPL 466
S++ SN ++ APLK+P W+ L
Sbjct: 49 SLSFSNSSPQTKAPLKKPKWVDDL 72
>At3g54100.1 68416.m05981 expressed protein similar to axi 1
[Nicotiana tabacum] GI:559921; contains Pfam profile
PF03138: Plant protein family
Length = 638
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = -2
Query: 684 PELWAVAXP---RSCTASPKPHRRLQRARCTYLIVAA 583
PE+W R C PK + RLQR YL+V A
Sbjct: 194 PEIWQKPESGNYRQCVTRPKNYTRLQRQTNGYLVVHA 230
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 279 PHPECLHPPSFQCSSDGEVGPQVVPEARL-QLPTHTAQVEEASPQATPPP 133
P + PPS +D + P PEA Q P + + E + +PPP
Sbjct: 99 PEVDSPQPPSSSPEADSPLPPSSSPEANSPQSPASSPKPESLADSPSPPP 148
>At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearly
identical to ubiquitin-protein ligase 2 [Arabidopsis
thaliana] GI:7108523; E3, HECT-domain protein family;
similar to ubiquitin-protein ligase 2 GI:7108523 from
[Arabidopsis thaliana]
Length = 3658
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 177 TAQVEEASPQATPPPTVDPDRTKNWKPETXMEIETXSXXG 58
T+ ++ S A PPP DPD N++P +++ + G
Sbjct: 2510 TSGIQNVSVTAIPPPVDDPD--SNFQPSVDVDMSSDGAEG 2547
>At3g50890.1 68416.m05572 zinc finger homeobox family protein /
ZF-HD homeobox family protein hypothetical protein
T8K22.16 - Arabidopsis thaliana, chromosome II BAC
T8K22, PIR2:T00609
Length = 249
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -2
Query: 192 QLPTHTAQVEEASPQATPPPTVDPDRTKNWKPETXME 82
++ HT EA P++ P + P + +N KP+T ++
Sbjct: 19 EVKPHTDPEPEAKPESDPSMALFPIKKENQKPKTRVD 55
>At3g26910.1 68416.m03367 hydroxyproline-rich glycoprotein family
protein common family member:At2g33490 [Arabidopsis
thaliana]
Length = 608
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = -2
Query: 273 PECLHPPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPPTVDP 121
P P + S G P P LQ H++ SP A+PPP P
Sbjct: 438 PSSTKPITMADSYSGAFCPLPTPPV-LQSHPHSSSSPRVSPTASPPPASSP 487
>At1g75310.1 68414.m08748 DNAJ heat shock N-terminal
domain-containing protein low similarity to SP|Q27974
Auxilin {Bos taurus}; contains Pfam profile PF00226:
DnaJ domain
Length = 1448
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 258 PPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPP 136
P SFQC+ +GE G P+ + E+A ++PP
Sbjct: 262 PSSFQCTLNGEHGASERLSGLNSGPSERYETEDADSPSSPP 302
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 219 PQVV-PEARLQLPTHTAQVEEASPQATPPPTVDPDRTKN 106
PQ V P R PTH V+ P A PPPTV T N
Sbjct: 819 PQTVAPPVRPMTPTHQVAVQP-EPVA-PPPTVQTADTSN 855
>At1g11100.1 68414.m01271 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to RUSH-1alpha [Oryctolagus cuniculus]
GI:1655930; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1226
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 221 PTSPSEEHWKEGGCRHSGWGEVVF 292
P P EE K GGC S +VVF
Sbjct: 591 PYLPCEEDSKNGGCNQSDHSQVVF 614
>At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 462
Score = 23.0 bits (47), Expect(2) = 9.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 186 PTHTAQVEEASPQATPPPTVD 124
P H +A P A PPP+ D
Sbjct: 275 PMHPPVFLQAPPSAPPPPSED 295
Score = 22.6 bits (46), Expect(2) = 9.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 243 CSSDGEVGPQVVPEARLQLPTHT 175
C+S G PQVV + RL+ T
Sbjct: 233 CASHGRRRPQVVRQTRLKFAPST 255
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,849,703
Number of Sequences: 28952
Number of extensions: 286384
Number of successful extensions: 1029
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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