Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_K12
(501 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-... 152 4e-36
UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4; Eukary... 146 3e-34
UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47; Eutel... 144 7e-34
UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1; ... 140 2e-32
UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=... 135 5e-31
UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4; Eukary... 132 3e-30
UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13; Eukaryota... 112 4e-24
UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal ... 103 3e-21
UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of cy... 96 5e-19
UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6; ... 95 1e-18
UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea... 94 1e-18
UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42; Euka... 92 6e-18
UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative; ... 92 7e-18
UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative; ... 89 5e-17
UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177, w... 87 3e-16
UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostel... 79 4e-14
UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal ... 55 6e-14
UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4; Peziz... 77 3e-13
UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2; ... 74 2e-12
UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lambl... 71 1e-11
UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;... 71 2e-11
UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1; Enceph... 50 3e-05
UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5; Therm... 50 3e-05
UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2; Archa... 47 2e-04
UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2; Desul... 45 8e-04
UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal ... 40 0.031
UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1; ... 40 0.042
UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofil... 36 0.39
UniRef50_Q3T2M5 Cluster: Cassette chromosome recombinase C; n=15... 33 2.7
UniRef50_Q0VN96 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_A4B1R0 Cluster: TonB-dependent receptor; n=1; Alteromon... 32 6.3
UniRef50_Q23BT3 Cluster: Protein kinase domain containing protei... 32 6.3
UniRef50_Q5QXQ3 Cluster: Uncharacterized conserved membrane prot... 32 8.3
UniRef50_Q2GB12 Cluster: Cytochrome P450; n=3; Sphingomonadaceae... 32 8.3
>UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA
- Drosophila melanogaster (Fruit fly)
Length = 157
Score = 152 bits (369), Expect = 4e-36
Identities = 66/103 (64%), Positives = 83/103 (80%)
Frame = -3
Query: 313 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 134
RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ + FY GK CVYVY+A+ + +P
Sbjct: 46 RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVP 105
Query: 133 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHK 5
P +KT++RA+WGKVTR HGN+G+VRA+F NLP AMGH+
Sbjct: 106 QHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHR 147
>UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4;
Eukaryota|Rep: Clone ZZZ247 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 128
Score = 146 bits (353), Expect = 3e-34
Identities = 66/103 (64%), Positives = 78/103 (75%)
Frame = -3
Query: 313 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 134
R GRLY KA FTGY+RGLRNQHE+TALL+++G +R FY GK CVYVYRA+K+ P
Sbjct: 18 RPGRLYVKATFTGYRRGLRNQHESTALLRIDGVTERKSTEFYLGKRCVYVYRAEKKKVFP 77
Query: 133 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHK 5
R K TK+R IWGK+ RPHGNSG VRA+FK NLPA AMG +
Sbjct: 78 --RRQKPTKIRVIWGKIMRPHGNSGIVRARFKHNLPASAMGKR 118
>UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47;
Euteleostomi|Rep: 60S ribosomal protein L35a - Homo
sapiens (Human)
Length = 110
Score = 144 bits (350), Expect = 7e-34
Identities = 66/101 (65%), Positives = 78/101 (77%)
Frame = -3
Query: 307 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 128
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 127 PRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHK 5
GK K R IWGKVTR HGNSG VRAKF+SNLPA+A+GH+
Sbjct: 62 --GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHR 100
>UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1;
Diaphorina citri|Rep: Putative ribosomal protein L35Ae -
Diaphorina citri (Asian citrus psyllid)
Length = 172
Score = 140 bits (339), Expect = 2e-32
Identities = 66/108 (61%), Positives = 80/108 (74%)
Frame = -3
Query: 328 KASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKK 149
K + RHGRLYA+A+FTG+KRG RNQH NT+LL +E + DA FY GK CV++Y+AK
Sbjct: 57 KRLRLRHGRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKT 116
Query: 148 RTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHK 5
+ P R K++LRAIWGKVTRPHG+SGSVRAKF NLPA MG K
Sbjct: 117 KELKPHSKR--KSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRK 162
>UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=1;
Ciona intestinalis|Rep: Putative 60S ribosomal protein
L35a - Ciona intestinalis (Transparent sea squirt)
Length = 122
Score = 135 bits (327), Expect = 5e-31
Identities = 62/97 (63%), Positives = 75/97 (77%)
Frame = -3
Query: 304 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 125
RL+ KAVFTGY RGLRNQHE+TALL++EG ++ D FY GK C YVY+AK++T P
Sbjct: 4 RLWCKAVFTGYTRGLRNQHEHTALLRIEGVTNKEDTDFYLGKKCAYVYKAKRKTKT---P 60
Query: 124 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAM 14
RG+ K R IWGKVTR HGNSG VRA FK+NLPA+A+
Sbjct: 61 RGEPNKTRVIWGKVTRSHGNSGVVRATFKTNLPAKAI 97
>UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4;
Eukaryota|Rep: 60S ribosomal protein L35a -
Caenorhabditis elegans
Length = 124
Score = 132 bits (320), Expect = 3e-30
Identities = 62/111 (55%), Positives = 80/111 (72%)
Frame = -3
Query: 337 VLRKASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYR 158
V R+ S P GRLY KA+FTG+KRGLR Q E+T+LLK+EG ++ DA FYAGK VY+Y+
Sbjct: 6 VARRPSAPTTGRLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYK 65
Query: 157 AKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHK 5
A +T G T+ RAIWGK+TRPHGN+G+VRAKF N+P A+G +
Sbjct: 66 AHNKTLKTG--HTVATRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALGKR 114
>UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13;
Eukaryota|Rep: Ribosomal protein L35A - Zea mays (Maize)
Length = 112
Score = 112 bits (270), Expect = 4e-24
Identities = 51/100 (51%), Positives = 67/100 (67%)
Frame = -3
Query: 304 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 125
RLY + GYKR NQ+E T+L+++EG + D +YAGK Y+Y+AK ++
Sbjct: 11 RLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS------ 64
Query: 124 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHK 5
+T+ R IWGKVTRPHGNSG VRAKFKSNLP ++MG K
Sbjct: 65 --SETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRK 102
>UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal
protein L35a; n=7; Euarchontoglires|Rep: PREDICTED:
similar to ribosomal protein L35a - Mus musculus
Length = 86
Score = 103 bits (246), Expect = 3e-21
Identities = 48/78 (61%), Positives = 56/78 (71%)
Frame = -3
Query: 238 ALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSG 59
ALLK+EG R++ FY GK C YVY+AK T PGG K K R IWGKVTR HGNS
Sbjct: 2 ALLKIEGVYARDETEFYLGKRCAYVYKAKNNTMTPGG---KLNKTRMIWGKVTRAHGNSS 58
Query: 58 SVRAKFKSNLPAQAMGHK 5
VRAKF+SNLPA+A+GH+
Sbjct: 59 MVRAKFRSNLPAKAIGHR 76
>UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L35a, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 109
Score = 95.9 bits (228), Expect = 5e-19
Identities = 47/100 (47%), Positives = 61/100 (61%)
Frame = -3
Query: 304 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 125
RLY + + GYKR NQ+ +T+L+K+EG D FY GK YVY+AK +
Sbjct: 8 RLYVRGLILGYKRARTNQYNHTSLIKLEGVSDAPSTAFYGGKKLCYVYKAKTKK------ 61
Query: 124 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHK 5
+ T R IWGKV R HG SG VRAKFKS+LP+ ++G K
Sbjct: 62 --QGTAYRTIWGKVMRAHGTSGVVRAKFKSHLPSNSIGGK 99
>UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein l35a, putative -
Leishmania major
Length = 144
Score = 94.7 bits (225), Expect = 1e-18
Identities = 46/103 (44%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Frame = -3
Query: 304 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAK--KRTPIPG 131
RLY K GY RGL Q + TAL++VE R DA +Y GK YVY K KR
Sbjct: 32 RLYMKGTLAGYTRGLHGQTKQTALVRVENVNTREDATWYVGKRVCYVYHGKKVKRCVRWS 91
Query: 130 GPRGKKTKLRAIWGKVTRPHGNSGSVRAKFK-SNLPAQAMGHK 5
+++ RA+WG+VTRPHGN+G +R KF +++PA A+G +
Sbjct: 92 KAPARRSTTRALWGRVTRPHGNAGMMRVKFNGASVPASAIGRR 134
>UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea
mays (Maize)
Length = 139
Score = 94.3 bits (224), Expect = 1e-18
Identities = 43/85 (50%), Positives = 58/85 (68%)
Frame = -3
Query: 268 RGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWG 89
R NQ+E T+L+++EG + D +YAGK Y+Y+AK ++ +T+ R IWG
Sbjct: 43 RSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS--------SETRYRCIWG 94
Query: 88 KVTRPHGNSGSVRAKFKSNLPAQAM 14
KVTRPHGNSG VRAKFKSNLP ++M
Sbjct: 95 KVTRPHGNSGVVRAKFKSNLPPESM 119
>UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42;
Eukaryota|Rep: 60S ribosomal protein L33-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 107
Score = 92.3 bits (219), Expect = 6e-18
Identities = 47/98 (47%), Positives = 59/98 (60%)
Frame = -3
Query: 304 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 125
RLY K Y+R R + N +L+K+EG +A FY GK YVYRA K
Sbjct: 6 RLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEV------ 59
Query: 124 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 11
RG +K+R +WGKVTR HGNSG VRA F++NLPA+ G
Sbjct: 60 RG--SKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFG 95
>UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative;
n=2; Filobasidiella neoformans|Rep: 60s ribosomal
protein l33-b, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 178
Score = 91.9 bits (218), Expect = 7e-18
Identities = 44/98 (44%), Positives = 64/98 (65%)
Frame = -3
Query: 304 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 125
RLY K G+KRG RN N +LL++EG ++ A Y GK YVY+AK+ I G
Sbjct: 77 RLYIKGRILGHKRGKRNSRPNQSLLQIEGVDNKEAAGHYLGKRVAYVYKAKRE--ING-- 132
Query: 124 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 11
+++R IWG+++R HGNSG+V++KF++NLPA+ G
Sbjct: 133 ----SRVRVIWGRISRSHGNSGAVKSKFRTNLPAKTFG 166
>UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative;
n=5; Plasmodium|Rep: 60S ribosomal protein L33-B,
putative - Plasmodium vivax
Length = 146
Score = 89.0 bits (211), Expect = 5e-17
Identities = 43/100 (43%), Positives = 55/100 (55%)
Frame = -3
Query: 304 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 125
RLY K V GYKR RNQ N L+ + + A FY GK YVYR K
Sbjct: 45 RLYEKGVILGYKRSQRNQDPNFTLISIRNVHTKKHAQFYVGKKIAYVYRTNK-------- 96
Query: 124 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHK 5
K++ IWGKV R HGNSG +RA+F++N+P +A G +
Sbjct: 97 HHDGVKIKCIWGKVCRTHGNSGVIRARFRTNIPPKAFGDR 136
>UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=9; Eukaryota|Rep:
Chromosome undetermined scaffold_177, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 129
Score = 86.6 bits (205), Expect = 3e-16
Identities = 43/98 (43%), Positives = 60/98 (61%)
Frame = -3
Query: 304 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 125
RL+ KAVFTG++R Q+EN ALLK+E D + FY GK Y+Y+A
Sbjct: 28 RLWVKAVFTGFRRSKVQQNENQALLKIEHVNDVASSRFYWGKRVAYIYKAHSLK------ 81
Query: 124 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 11
TK RAIWG++++ HG++G V A+F NLP +A+G
Sbjct: 82 --NNTKFRAIWGRISKSHGSNGVVTARFGRNLPPRAIG 117
>UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L35a -
Dictyostelium discoideum AX4
Length = 105
Score = 79.4 bits (187), Expect = 4e-14
Identities = 39/98 (39%), Positives = 55/98 (56%)
Frame = -3
Query: 304 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 125
++Y+K V GY+R Q+ N +L+K+EG R D+ FY GK V + K P
Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAK---NP 59
Query: 124 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 11
G K WGK+ + HG+SG V+A+F NLP +AMG
Sbjct: 60 TGHKIS----WGKICKTHGSSGVVQARFARNLPPKAMG 93
>UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein L35a - Macaca mulatta
Length = 80
Score = 54.8 bits (126), Expect(2) = 6e-14
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = -3
Query: 307 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGK 179
GRL++KAVF GYKRG RNQ E+TALLK+E ++ FY K
Sbjct: 3 GRLWSKAVFAGYKRGPRNQREHTALLKIEAVYAGDETEFYLDK 45
Score = 44.4 bits (100), Expect(2) = 6e-14
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -3
Query: 79 RPHGNSGSVRAKFKSNLPAQAMGH 8
+ HGNSG VRAKF+SNLPA+A+GH
Sbjct: 46 KAHGNSGMVRAKFQSNLPAKAIGH 69
>UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L35Ae -
Aspergillus fumigatus (Sartorya fumigata)
Length = 119
Score = 76.6 bits (180), Expect = 3e-13
Identities = 38/87 (43%), Positives = 54/87 (62%)
Frame = -3
Query: 271 KRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIW 92
++G+ + +L+K++G A FY GK +VYRAK+ RG + +R IW
Sbjct: 29 RQGIWEADTSYSLIKIDGVDSTEAANFYLGKKVAFVYRAKREV------RG--SNIRVIW 80
Query: 91 GKVTRPHGNSGSVRAKFKSNLPAQAMG 11
GKVTRPHGNSG VRA+F+ NLP ++ G
Sbjct: 81 GKVTRPHGNSGVVRAQFRHNLPPKSFG 107
>UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 102
Score = 73.7 bits (173), Expect = 2e-12
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Frame = -3
Query: 310 HG-RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 134
HG RLY K Y+RG R + NT+L+K+EG +D A FY GK +VYRAK+
Sbjct: 5 HGHRLYVKGRHLSYQRGKRATNPNTSLIKLEGVEDIKAANFYLGKKVAFVYRAKREV--- 61
Query: 133 GGPRGKKTKLRAIWGKVTRPHGNSG----SVRAKFKSNLPA 23
+ +K+R IWGKVTR HG G +++ +F S P+
Sbjct: 62 -----QGSKIRVIWGKVTRTHGQLGRCPCAIQTQFFSQSPS 97
>UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_479_47445_47074 - Giardia lamblia
ATCC 50803
Length = 123
Score = 70.9 bits (166), Expect = 1e-11
Identities = 40/101 (39%), Positives = 54/101 (53%)
Frame = -3
Query: 307 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 128
G+ + A+F GY+R Q EN AL+KV G R + G+ + + +K PI
Sbjct: 6 GKTFLPAIFVGYQRSRAKQRENVALVKVSGIYTRAETDKVLGR-LIAIIHSKSGKPI--- 61
Query: 127 PRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHK 5
+GK+ RPHGNSG VRA+F +NLP Q MGHK
Sbjct: 62 -----------FGKICRPHGNSGMVRARFYTNLPGQLMGHK 91
>UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L35Ae,
putative - Trichomonas vaginalis G3
Length = 102
Score = 70.5 bits (165), Expect = 2e-11
Identities = 38/98 (38%), Positives = 54/98 (55%)
Frame = -3
Query: 304 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 125
+L+ A F ++R R N ALL+++G + +A FYAGK V++ K+ I
Sbjct: 6 KLFVPATFVSFRRSKRIIKPNQALLEIQGVVSKEEAQFYAGKKVASVWKFDKQEFIN--- 62
Query: 124 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 11
WG +T+PHGNSG VRAKF+ NLP Q +G
Sbjct: 63 ----------WGVITQPHGNSGVVRAKFEKNLPPQMLG 90
>UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L35A
- Encephalitozoon cuniculi
Length = 113
Score = 50.0 bits (114), Expect = 3e-05
Identities = 30/93 (32%), Positives = 43/93 (46%)
Frame = -3
Query: 289 AVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKT 110
A F +KRG R H LLK+ +++A Y G V + + P
Sbjct: 18 ATFVSFKRGQRRLHPRHVLLKIRNVTSKDEASSYVGNGVVCYKKNNEGERYP-------- 69
Query: 109 KLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 11
+ G +TR HGNSG+VRA+F NL + +G
Sbjct: 70 ----VHGVITRIHGNSGAVRARFTRNLDPKLLG 98
>UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L35Ae -
Pyrococcus abyssi
Length = 87
Score = 50.0 bits (114), Expect = 3e-05
Identities = 31/94 (32%), Positives = 43/94 (45%)
Frame = -3
Query: 292 KAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKK 113
K V Y+R NQH N ++K R +A G+ ++ P GK
Sbjct: 4 KGVVLSYRRSKENQHTNVMIIKPLNVNSREEASKLIGRLVIWK-----------SPSGKL 52
Query: 112 TKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 11
K GK+ R HG G+VRA+F+ LP QA+G
Sbjct: 53 LK-----GKIVRVHGTKGAVRARFEKGLPGQALG 81
>UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2;
Archaea|Rep: 50S ribosomal protein L35Ae - Methanopyrus
kandleri
Length = 90
Score = 47.2 bits (107), Expect = 2e-04
Identities = 28/94 (29%), Positives = 45/94 (47%)
Frame = -3
Query: 292 KAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKK 113
+ V Y+ G Q +++ EG + R++A GK ++ + P G
Sbjct: 6 RGVIVNYRMGRHTQDPRQCIIEFEGVESRSEAAQLIGKEVIWKH------PETG------ 53
Query: 112 TKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 11
+ I GKV HGN+G+VR +F+ LP QA+G
Sbjct: 54 ---KVIRGKVVDTHGNNGAVRVRFERGLPGQALG 84
>UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L35Ae -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 106
Score = 45.2 bits (102), Expect = 8e-04
Identities = 33/98 (33%), Positives = 44/98 (44%)
Frame = -3
Query: 304 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 125
R+Y + GY+ G Q+E L++V+G DR A G +Y
Sbjct: 7 RVYT-GIILGYRLGSNTQYEKQVLIRVDGVNDRASASRLIGWKVLY-------------R 52
Query: 124 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 11
GK + R GK+ HG+ G V A FK NLP QA G
Sbjct: 53 DGKGNEYR---GKIVHVHGSKGVVIAVFKPNLPGQARG 87
>UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L35a - Rattus norvegicus
Length = 106
Score = 39.9 bits (89), Expect = 0.031
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = -3
Query: 307 GRLYAKAVFTGYKR--GLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 134
GR KAV G+ G+R+ + + EG R++ + K C YVY+AK P
Sbjct: 22 GRYTRKAVVQGHFSWLGVRSLKPKSTD-RAEGVYARDETELHLAKRCAYVYKAKISAVTP 80
Query: 133 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKF 41
G GK K R + GK P +G AKF
Sbjct: 81 G---GKTNKTRVVRGKQLGP--RNGLFCAKF 106
>UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 225
Score = 39.5 bits (88), Expect = 0.042
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +2
Query: 14 HSLGREVRLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSVHIDAMLASIK 193
H LGR++ LELGSD V + +G LAP +T++ L V + LA+I
Sbjct: 60 HGLGRQIGLELGSDNTTVTVRSGDLAPXATKVRSVLLH--------LGLVDVRHSLAAIP 111
Query: 194 DCIITVFCSFNLEESGVLVLV 256
++ +F+L++ GV +LV
Sbjct: 112 RHLLLGVHAFDLDQRGVGILV 132
>UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L35Ae - Thermofilum
pendens (strain Hrk 5)
Length = 85
Score = 36.3 bits (80), Expect = 0.39
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -3
Query: 91 GKVTRPHGNSGSVRAKFKSNLPAQAMGHK 5
GK+ R HG G V A FK +LP QA+G K
Sbjct: 53 GKIVRMHGRRGHVLAYFKRHLPGQAVGTK 81
>UniRef50_Q3T2M5 Cluster: Cassette chromosome recombinase C; n=15;
Staphylococcus|Rep: Cassette chromosome recombinase C -
Staphylococcus aureus
Length = 559
Score = 33.5 bits (73), Expect = 2.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 286 VFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKH 176
V+ GY R N H+N A+ + G D+ND + GKH
Sbjct: 233 VYKGYVRF--NNHQNWAVQRRSGKSDKNDVILVKGKH 267
>UniRef50_Q0VN96 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 204
Score = 32.7 bits (71), Expect = 4.8
Identities = 25/78 (32%), Positives = 36/78 (46%)
Frame = +2
Query: 26 REVRLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSVHIDAMLASIKDCII 205
++VRL LG DT RV H AP +T+L F T + S+H A A +K +
Sbjct: 94 KQVRLALGEDTQRVRRVILHTAPANTELQTFLTDKVDG----MVSIHASA--ADVKRALA 147
Query: 206 TVFCSFNLEESGVLVLVA 259
V+ G + LV+
Sbjct: 148 PVYAPEPSHPIGDIFLVS 165
>UniRef50_A4B1R0 Cluster: TonB-dependent receptor; n=1; Alteromonas
macleodii 'Deep ecotype'|Rep: TonB-dependent receptor -
Alteromonas macleodii 'Deep ecotype'
Length = 640
Score = 32.3 bits (70), Expect = 6.3
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = -1
Query: 318 SPATAGCTQRP-YSQ----DISVVYATSTRTPLS-SRLKEQKTVMMQSFMLASIASMCTE 157
S A C P YSQ DI + T TR P+S ++L +V+ +S + AS A T+
Sbjct: 11 SAAVLSCLSTPAYSQTLNQDIETLTVTGTRLPISLTKLPGSVSVLTESDIQASGALQLTD 70
Query: 156 LRRGHQFPEVPVAKKPS 106
L RG P V +A+ S
Sbjct: 71 LIRG--LPGVSLAQSGS 85
>UniRef50_Q23BT3 Cluster: Protein kinase domain containing protein;
n=2; Tetrahymena thermophila SB210|Rep: Protein kinase
domain containing protein - Tetrahymena thermophila
SB210
Length = 1073
Score = 32.3 bits (70), Expect = 6.3
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -3
Query: 331 RKASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVY 167
RK H Y +F GY L++ + L+ + DRN +++ + C+Y
Sbjct: 573 RKTCLELHKAFYEAVIFEGYLDFLQSYIDKIRLILSQSCSDRNKDIYFFREVCIY 627
>UniRef50_Q5QXQ3 Cluster: Uncharacterized conserved membrane
protein; n=3; Gammaproteobacteria|Rep: Uncharacterized
conserved membrane protein - Idiomarina loihiensis
Length = 345
Score = 31.9 bits (69), Expect = 8.3
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 154 KKRTPIPGGPRGKKTKLRA--IWGKVTRPHGNSGSVRAKFKSNLPAQAMG 11
KK P GP K+ K +WG+++ GN S+R K K+ A G
Sbjct: 261 KKLESQPAGPEEKERKNNPTYVWGEISDAKGNKKSMRVKVKNGYSLTAEG 310
>UniRef50_Q2GB12 Cluster: Cytochrome P450; n=3;
Sphingomonadaceae|Rep: Cytochrome P450 - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 421
Score = 31.9 bits (69), Expect = 8.3
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Frame = -3
Query: 328 KASKPRHGRLYAKAVFTGYK----RGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVY 161
K P H Y KA+ G R L +Q A+ +EG DR F G V+
Sbjct: 104 KLDPPEHTP-YRKAIDKGLNLAEIRKLEDQIRTIAVEIIEGFADRGHCEF--GSEFSTVF 160
Query: 160 RAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNS 62
+ + G P TKL + ++TRP GN+
Sbjct: 161 PVRVFLALAGLPVEDATKLGLLANEMTRPSGNT 193
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,848,201
Number of Sequences: 1657284
Number of extensions: 9796882
Number of successful extensions: 27072
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 26329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27049
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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