Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_K11
         (384 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   2.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   2.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   4.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   5.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   7.4  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 1   FYINYYVAAFPCMXVHSSF 57
           FY ++Y+ ++  + V+S F
Sbjct: 56  FYFSFYITSYTLLSVYSLF 74


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 1   FYINYYVAAFPCMXVHSSF 57
           FY ++Y+ ++  + V+S F
Sbjct: 56  FYFSFYITSYTLLSVYSLF 74


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 121 VGPRCDSDV 147
           VGPRC+ D+
Sbjct: 291 VGPRCEGDI 299


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 358 LWIFHFTLWLWKSGKFQFIFENK 290
           LWI  FTL +  SG ++  F  K
Sbjct: 36  LWILLFTLGVTISGVYRTDFYKK 58


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 13   YYVAAFPCMXVHSSFFTLEQLSG 81
            YY   F  +   SSF T+  + G
Sbjct: 1218 YYATIFTIITATSSFVTIHNVIG 1240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,834
Number of Sequences: 336
Number of extensions: 1547
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)