Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_K08
(810 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50313-5|AAA92329.1| 270|Caenorhabditis elegans Palmitoyl prote... 221 6e-58
AY691522-1|AAU01161.1| 254|Caenorhabditis elegans palmitoyl pro... 211 4e-55
Z93778-3|CAB07846.1| 446|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 29 5.2
AL021481-2|CAA16334.1| 595|Caenorhabditis elegans Hypothetical ... 29 5.2
AF022973-9|AAC25802.2| 1373|Caenorhabditis elegans Hypothetical ... 28 6.9
Z82070-4|CAB04913.2| 227|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z48783-6|CAA88700.1| 371|Caenorhabditis elegans Hypothetical pr... 28 9.1
>U50313-5|AAA92329.1| 270|Caenorhabditis elegans Palmitoyl protein
thioesteraseprotein 1 protein.
Length = 270
Score = 221 bits (539), Expect = 6e-58
Identities = 99/216 (45%), Positives = 145/216 (67%)
Frame = -2
Query: 740 VEYVCEKLAADPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGI 561
V C K+ DP+L NG+N +GFSQG QF+RAV QRC + P +KN+VS+GGQHQG++G
Sbjct: 56 VYMACIKIKNDPELKNGYNAIGFSQGAQFLRAVAQRCPN--PPMKNLVSVGGQHQGVFGA 113
Query: 560 PHCGALRHETCDDVRKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVR 381
P+C + C+ VR+L++ AY +VQ +VQA YWHDP Y+ S+FLADINN
Sbjct: 114 PYCIG-DNIMCNGVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVEEYKKRSIFLADINNEN 172
Query: 380 TVNKTYIQNLNNLERFVLVMFDNDSIVQPKETEWFGFYAPGQAEKLVSLRESKIYLQDRL 201
N TY +NL +L+ VLV F+ D +V PK++ WFGFY G + ++ + E+ +Y +DR+
Sbjct: 173 NNNPTYKRNLLSLKNLVLVKFNQDHMVVPKDSSWFGFYKDGDIDTILPMNETDLYKEDRI 232
Query: 200 GLKKMDKAGKLIFLSTPGDHLRFTEEWMIKNIIKPY 93
GLKK+ ++G++ F+ GDHL+ ++ +IIK Y
Sbjct: 233 GLKKLHESGRIHFMDVDGDHLQIPRSVLVNDIIKKY 268
>AY691522-1|AAU01161.1| 254|Caenorhabditis elegans palmitoyl
protein thioesterase protein.
Length = 254
Score = 211 bits (516), Expect = 4e-55
Identities = 95/202 (47%), Positives = 138/202 (68%)
Frame = -2
Query: 740 VEYVCEKLAADPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGI 561
V C K+ DP+L NG+N +GFSQG QF+RAV QRC + P +KN+VS+GGQHQG++G
Sbjct: 56 VYMACIKIKNDPELKNGYNAIGFSQGAQFLRAVAQRCPN--PPMKNLVSVGGQHQGVFGA 113
Query: 560 PHCGALRHETCDDVRKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVR 381
P+C + C+ VR+L++ AY +VQ +VQA YWHDP Y+ S+FLADINN
Sbjct: 114 PYCIG-DNIMCNGVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVXEYKKRSIFLADINNEN 172
Query: 380 TVNKTYIQNLNNLERFVLVMFDNDSIVQPKETEWFGFYAPGQAEKLVSLRESKIYLQDRL 201
N TY +NL +L+ VLV F+ D +V PK++ WFGFY G + ++ + E+ +Y +DR+
Sbjct: 173 NNNPTYKRNLLSLKNLVLVKFNQDHMVVPKDSXWFGFYKDGDIDTILPMNETDLYKEDRI 232
Query: 200 GLKKMDKAGKLIFLSTPGDHLR 135
GLKK+ ++G++ F+ GDHL+
Sbjct: 233 GLKKLHESGRIHFMDVDGDHLQ 254
>Z93778-3|CAB07846.1| 446|Caenorhabditis elegans Hypothetical
protein C31H5.6 protein.
Length = 446
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = -2
Query: 749 DLQVEYVCEKLAADPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQH 579
D+ VEY + + LS N++G QG F +V + PQIK +VS+ G H
Sbjct: 211 DVDVEYFLKPIEFVLGLSYTTNMLGI-QGVSFGATIVDLLSTRYPQIKAVVSINGPH 266
>Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical
protein DY3.5 protein.
Length = 796
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 248 SRPVPERKNRTIPSPSAALCYHYRTSPARIFLD 346
SRP P + PSPS +L R PA +++D
Sbjct: 667 SRPAPATSSVVTPSPSQSLTQQIRKLPAVLYID 699
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 152 ALIRKLIFPLYPFS*GRVDPANKS*IPLTIPISRPVPERKNRTIPSPSAALCYHYRTSP 328
A+ R FP P S G P+ + IP + +RP P + P+P+ Y + +P
Sbjct: 127 AVSRPPAFPTPPPSVGSAAPSIQPPIPSALASARPAPFPAAQPPPAPTPTPSYQQQMAP 185
>AL021481-2|CAA16334.1| 595|Caenorhabditis elegans Hypothetical
protein Y43F4B.5a protein.
Length = 595
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -2
Query: 503 YAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVRTVNKTYIQNLNNL 342
YA YN + + LV++TYW P E T + S AD+ + + + ++ +L
Sbjct: 451 YALYNRYGFH-LVRSTYWMVPAPEVTKKLFSTLRADLKFPTKIGEAEVASVRDL 503
>AF022973-9|AAC25802.2| 1373|Caenorhabditis elegans Hypothetical
protein F25G6.9 protein.
Length = 1373
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = -3
Query: 799 IGNNTVEDFENGYFMNPISKLNMYVRS*RPIQNYQTDSMSWVSHRDVSLFE 647
+G +++ E G +NP ++V+ + +QN D +S H++V ++
Sbjct: 579 LGAFELDELEKGLKINPAQFATLFVKLRKEVQNGFIDFLSLCLHKEVESYQ 629
>Z82070-4|CAB04913.2| 227|Caenorhabditis elegans Hypothetical
protein W04E12.4 protein.
Length = 227
Score = 27.9 bits (59), Expect = 9.1
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = -2
Query: 542 RHETCDDV-RKLLNYAAYNSWVQNSLVQATYWHDPLDERTYEANSVFLADINNVRTVNKT 366
++ET DD+ +L+ + Y W+ +L +A R YE + + I+ R K
Sbjct: 13 KNETWDDILNELMENSEY--WMDMTLPKAE------QRRNYEKMAEVMRRIDVCRERQKA 64
Query: 365 YIQNLNNLERFVLVMFDNDSIVQPKETE 282
+Q L NLE+ V +N + + +E E
Sbjct: 65 TLQKLRNLEKLV-EQDENGAEISEEEQE 91
>Z48783-6|CAA88700.1| 371|Caenorhabditis elegans Hypothetical
protein F33H1.5 protein.
Length = 371
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 349 FKFCIYVLLTVLTLLMSARNTLFA--SYVRSSKGSCQYVA 462
F F I+ LLT + L++ + T+F+ S G C+YV+
Sbjct: 66 FNFAIFDLLTCVASLLACQKTIFSGLSLTYIFHGPCKYVS 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,949,291
Number of Sequences: 27780
Number of extensions: 385260
Number of successful extensions: 893
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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