Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_K06
(419 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 111 6e-24
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 88 8e-17
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 82 5e-15
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 75 6e-13
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 73 3e-12
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 71 7e-12
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 65 6e-10
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 65 6e-10
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 62 3e-09
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 62 3e-09
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 54 1e-06
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 51 8e-06
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 50 1e-05
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 49 3e-05
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 48 6e-05
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 48 6e-05
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 48 1e-04
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 47 1e-04
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 46 2e-04
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 46 4e-04
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 46 4e-04
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 45 5e-04
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 43 0.003
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 41 0.009
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 40 0.021
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 40 0.027
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 39 0.036
UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 39 0.047
UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella ve... 35 0.77
UniRef50_Q4Q6P1 Cluster: Putative uncharacterized protein; n=3; ... 34 1.3
UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma brucei... 33 1.8
UniRef50_Q9U2C1 Cluster: Putative uncharacterized protein smc-3;... 31 7.2
UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium 19... 31 9.5
UniRef50_Q0CS71 Cluster: Predicted protein; n=6; Trichocomaceae|... 31 9.5
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 111 bits (267), Expect = 6e-24
Identities = 58/94 (61%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Frame = -3
Query: 366 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 190
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 189 HAQYEKRAMELLKVSKDKRATEVLEATIGHTHPR 88
HA YEKR MELLKVSKDKRA + L+ +G TH R
Sbjct: 60 HAPYEKRTMELLKVSKDKRALKFLKRRLG-THIR 92
Score = 57.2 bits (132), Expect = 1e-07
Identities = 27/39 (69%), Positives = 30/39 (76%)
Frame = -1
Query: 155 LRCQKTSVXLKXLKRRLGTHIRAKRKREELSNVXAQMRK 39
L+ K LK LKRRLGTHIRAKRKREELSN+ Q+RK
Sbjct: 71 LKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 87.8 bits (208), Expect = 8e-17
Identities = 49/93 (52%), Positives = 62/93 (66%)
Frame = -3
Query: 366 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 187
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 186 AQYEKRAMELLKVSKDKRATEVLEATIGHTHPR 88
A YE+RAMELLKVSKDKRA + ++ +G TH R
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVG-THIR 82
Score = 54.8 bits (126), Expect = 7e-07
Identities = 26/39 (66%), Positives = 30/39 (76%)
Frame = -1
Query: 155 LRCQKTSVXLKXLKRRLGTHIRAKRKREELSNVXAQMRK 39
L+ K LK +K+R+GTHIRAKRKREELSNV A MRK
Sbjct: 61 LKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 81.8 bits (193), Expect = 5e-15
Identities = 39/61 (63%), Positives = 46/61 (75%)
Frame = -3
Query: 270 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRATEVLEATIGHTHP 91
R P RLKG+QTKH+KFVRD++REVVGH EKR ELLKV KDKRA + L+ +G TH
Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRALKFLKRRLG-THI 61
Query: 90 R 88
R
Sbjct: 62 R 62
Score = 55.2 bits (127), Expect = 5e-07
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -1
Query: 155 LRCQKTSVXLKXLKRRLGTHIRAKRKREELSNVXAQMRK 39
L+ K LK LKRRLGTHIRAKRKREELSN+ QM K
Sbjct: 41 LKVXKDKRALKFLKRRLGTHIRAKRKREELSNILTQMGK 79
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 74.9 bits (176), Expect = 6e-13
Identities = 42/94 (44%), Positives = 54/94 (57%)
Frame = -3
Query: 360 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 181
P + VGL KGH TK K + RP+ KG +K + FVR+L+REV G
Sbjct: 6 PNTGLFVGLNKGHIVTK----------KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXP 55
Query: 180 YEKRAMELLKVSKDKRATEVLEATIGHTHPRQEE 79
YEKR ELLKV KDKRA +V + +GH+ +EE
Sbjct: 56 YEKRITELLKVGKDKRALKVRQEKVGHSQESKEE 89
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 72.5 bits (170), Expect = 3e-12
Identities = 43/94 (45%), Positives = 55/94 (58%)
Frame = -3
Query: 360 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 181
P+ + VG+ KGH TK + + RP+ KG TK FVR L+REVVG A
Sbjct: 6 PKSGLFVGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAP 55
Query: 180 YEKRAMELLKVSKDKRATEVLEATIGHTHPRQEE 79
YEKR ELLKV KDKRA +V + +G TH R ++
Sbjct: 56 YEKRITELLKVGKDKRALKVAKRKLG-THKRAKK 88
Score = 42.3 bits (95), Expect = 0.004
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -1
Query: 155 LRCQKTSVXLKXLKRRLGTHIRAKRKREELSNVXAQMR 42
L+ K LK KR+LGTH RAK+KREE++ V +MR
Sbjct: 64 LKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 71.3 bits (167), Expect = 7e-12
Identities = 39/87 (44%), Positives = 56/87 (64%)
Frame = -3
Query: 348 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 169
+AVGL KGH T++ ++ R R KG+ +K +K VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 168 AMELLKVSKDKRATEVLEATIGHTHPR 88
+E+L++SKDKRA + L+ IG TH R
Sbjct: 59 VLEMLRISKDKRALKFLKRRIG-THRR 84
Score = 47.6 bits (108), Expect = 1e-04
Identities = 25/45 (55%), Positives = 27/45 (60%)
Frame = -1
Query: 173 RGLWSYLRCQKTSVXLKXLKRRLGTHIRAKRKREELSNVXAQMRK 39
R + LR K LK LKRR+GTH RAK KREEL NV RK
Sbjct: 57 RRVLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRK 101
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 64.9 bits (151), Expect = 6e-10
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Frame = -3
Query: 378 QSEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVRE 199
+ +I APR IAVGL KGH TT I + +RP+R KGL+TK + V +++RE
Sbjct: 6 EMKIEAPRSGIAVGLNKGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIRE 57
Query: 198 VVGHAQYEKRAMELLK---VSKDKRATEVLEATIG 103
V G A YE+ +EL+K S KRA + + +G
Sbjct: 58 VCGFAPYERHMIELIKTGSASAQKRALKFAKKRLG 92
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 64.9 bits (151), Expect = 6e-10
Identities = 39/85 (45%), Positives = 49/85 (57%)
Frame = -3
Query: 342 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 163
VGL KGH T+ + + RP KG +K + F+R L+REV G A YEKR
Sbjct: 12 VGLNKGHVVTR----------RELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRIT 61
Query: 162 ELLKVSKDKRATEVLEATIGHTHPR 88
ELLKV KDKRA +V + +G TH R
Sbjct: 62 ELLKVGKDKRALKVAKRKLG-THKR 85
Score = 45.2 bits (102), Expect = 5e-04
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = -1
Query: 155 LRCQKTSVXLKXLKRRLGTHIRAKRKREELSNVXAQMR 42
L+ K LK KR+LGTH RAKRKREE+S+V +MR
Sbjct: 64 LKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 62.5 bits (145), Expect = 3e-09
Identities = 36/91 (39%), Positives = 50/91 (54%)
Frame = -3
Query: 375 SEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREV 196
S A R + G+ KG TT I RP+ KGL+T+ FVR ++REV
Sbjct: 93 SSAPAQRSNLRYGMNKGRPTTVIPK----------TARPSNKKGLKTEKKTFVRSVIREV 142
Query: 195 VGHAQYEKRAMELLKVSKDKRATEVLEATIG 103
G + YEKR MELL+ SKDK+A ++ + +G
Sbjct: 143 AGFSPYEKRVMELLRNSKDKKAKKLTKKRLG 173
Score = 36.7 bits (81), Expect = 0.19
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1
Query: 155 LRCQKTSVXLKXLKRRLGTHIRAKRKREELSNVXAQMRK 39
LR K K K+RLGT +R+KRK EELS V + R+
Sbjct: 156 LRNSKDKKAKKLTKKRLGTLLRSKRKIEELSAVIVEQRR 194
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 62.5 bits (145), Expect = 3e-09
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = -3
Query: 294 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRATEVLE 115
K +T + + RP+R KG +K + FVR +VREV G A YE+R MEL++ S+DKRA ++ +
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAK 72
Query: 114 ATIG 103
+G
Sbjct: 73 KRLG 76
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 54.0 bits (124), Expect = 1e-06
Identities = 33/88 (37%), Positives = 51/88 (57%)
Frame = -3
Query: 366 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 187
M + IA+GL KG K T ++ K I+ K KG + +KFVR LVRE+ G
Sbjct: 1 MTVKTGIAIGLNKGKKVTSMTPAPK-ISYK---------KGAASNRTKFVRSLVREIAGL 50
Query: 186 AQYEKRAMELLKVSKDKRATEVLEATIG 103
+ YE+R ++L++ S +KRA +V + +G
Sbjct: 51 SPYERRLIDLIRNSGEKRARKVAKKRLG 78
Score = 31.9 bits (69), Expect = 5.4
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 125 KXLKRRLGTHIRAKRKREELSNVXAQMRK 39
K K+RLG+ RAK K EE++N+ A R+
Sbjct: 71 KVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 51.2 bits (117), Expect = 8e-06
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = -3
Query: 348 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 169
+A+GL KG + TK A ++R R +G TK +K VR+LVRE+ G A YE+R
Sbjct: 10 LAIGLEKGVRVTK----------NARKMRQNRKRGAATKKTKVVRELVREITGFAPYERR 59
Query: 168 AMELLKV 148
MELL V
Sbjct: 60 MMELLLV 66
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 50.4 bits (115), Expect = 1e-05
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Frame = -3
Query: 318 TTKISAGRKGITDKAIRIRPARLKG---LQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 148
T + G K + I+ R RL +QTK +K VRDL+ EVV HA ++K+ M+LLKV
Sbjct: 9 TNRHKLGNKSYKLRQIQYREDRLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLKV 68
Query: 147 SKDKRA 130
+DK A
Sbjct: 69 FQDKLA 74
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 49.2 bits (112), Expect = 3e-05
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = -3
Query: 366 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 187
MA +A+GL KGHK K + K + P RL TKH+KFV+D++REV
Sbjct: 1 MALHCPMAMGLDKGHKVMKNISKPKHSS-------PHRLL---TKHTKFVQDMIREVCDF 50
Query: 186 AQYEKRAMELLKVSKDKRATEVLEATIG-HTHPRQE 82
Y+ + L KVS DK A + ++ +G H H +++
Sbjct: 51 MSYDWCTVVLPKVSNDKCAFKFIKKRVGMHIHTKRK 86
Score = 37.9 bits (84), Expect = 0.083
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -1
Query: 125 KXLKRRLGTHIRAKRKREELSNVXAQMRK 39
K +K+R+G HI KRK EELS V A MRK
Sbjct: 71 KFIKKRVGMHIHTKRKWEELSIVIAAMRK 99
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 48.4 bits (110), Expect = 6e-05
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = -3
Query: 282 DKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKR 133
+K ++R ++ G TKH+KF+ + RE+ G A YE RA ELLKVSK K+
Sbjct: 70 NKGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATELLKVSKRKK 119
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 48.4 bits (110), Expect = 6e-05
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = -1
Query: 179 MRRGLWSYLRCQKTSVXLKXLKRRLGTHIRAKRKREELSNVXAQMRK 39
++R L+ K L+ +K+R+GTH+RAKR+ EELSNV A +RK
Sbjct: 55 VQRRAMELLKVSKDKRTLRLIKKRVGTHVRAKRETEELSNVLAAIRK 101
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 47.6 bits (108), Expect = 1e-04
Identities = 29/74 (39%), Positives = 42/74 (56%)
Frame = -3
Query: 357 RFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQY 178
R IAVGL +G T+ + T K +R RP++ KG K VR +++EV G + Y
Sbjct: 3 RTGIAVGLNRGFITSSL-------TKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPY 55
Query: 177 EKRAMELLKVSKDK 136
EKR +EL K ++ K
Sbjct: 56 EKRIIELFKTNQPK 69
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 47.2 bits (107), Expect = 1e-04
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = -3
Query: 240 QTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRATEVLEATIGHTHPR 88
Q+ + VR ++ EV G A YEKR +ELL++ KDKRA + + +G TH R
Sbjct: 28 QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGKDKRALKFAKKRLG-THLR 77
Score = 41.1 bits (92), Expect = 0.009
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -1
Query: 155 LRCQKTSVXLKXLKRRLGTHIRAKRKREELSNVXAQMR 42
LR K LK K+RLGTH+RAKRKRE+++ R
Sbjct: 56 LRIGKDKRALKFAKKRLGTHLRAKRKREQMAEALRSKR 93
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 46.4 bits (105), Expect = 2e-04
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -1
Query: 155 LRCQKTSVXLKXLKRRLGTHIRAKRKREELSN 60
L+ K LK +K+R+GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 45.6 bits (103), Expect = 4e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = -3
Query: 249 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRATEVLEATIG 103
K + TK +RD++RE+ G + YE+R ELLK DKRA +V + +G
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLG 83
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 45.6 bits (103), Expect = 4e-04
Identities = 30/90 (33%), Positives = 45/90 (50%)
Frame = -3
Query: 372 EIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVV 193
E PR I G KG+KTT+ A R D+ L K + V+ ++ ++V
Sbjct: 7 EAPVPRTGIIAGFNKGYKTTR-RARRPSSNDRY---------ALPHKKLRAVKAIISDLV 56
Query: 192 GHAQYEKRAMELLKVSKDKRATEVLEATIG 103
G + E+R ELL+V KDKRA + + +G
Sbjct: 57 GFSPMERRVQELLRVGKDKRALKFCKKRLG 86
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 45.2 bits (102), Expect = 5e-04
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = -3
Query: 360 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 181
P IAVG GH TK S +K I K++ K+ + D+VRE+ G +
Sbjct: 9 PSTGIAVGFNSGHIVTKRSV-KKSIKKKSV-----------PKNKDLINDVVREIAGFSP 56
Query: 180 YEKRAMELLKV---SKDKRATEVLEATIGHTHPR 88
YEKR +EL+KV + KR+ + + +G TH R
Sbjct: 57 YEKRLIELIKVGTSAATKRSLKYAKKKLG-THKR 89
Score = 35.1 bits (77), Expect = 0.58
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 140 TSVXLKXLKRRLGTHIRAKRKREELSNVXAQMRK 39
T LK K++LGTH R K KREE+ + R+
Sbjct: 73 TKRSLKYAKKKLGTHKRGKAKREEIQKIVMMQRR 106
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 42.7 bits (96), Expect = 0.003
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -1
Query: 143 KTSVXLKXLKRRLGTHIRAKRKREELSNVXAQMR 42
K + L+ R+LGTH RAKRKREE+SNV +MR
Sbjct: 22 KRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMR 55
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 41.1 bits (92), Expect = 0.009
Identities = 26/86 (30%), Positives = 42/86 (48%)
Frame = -3
Query: 360 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 181
PR I G KGH TT+ + + P + KH + V+ ++ ++VG +
Sbjct: 6 PRTGIIAGFNKGHVTTR----------RPRQPSPNDRFAVPHKHLRAVKAIIADLVGLSP 55
Query: 180 YEKRAMELLKVSKDKRATEVLEATIG 103
EKR E L+V K+KRA + + +G
Sbjct: 56 LEKRVQEFLRVGKEKRALKYCKKRLG 81
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 39.9 bits (89), Expect = 0.021
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Frame = -3
Query: 237 TKHSKFVRDLVREVVGHAQYEKRAMELLKV---SKDKRATEVLEATIGHTHPR 88
+K + ++D+VRE+ G + YEKR +EL+K+ + KR+ + + +G TH R
Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIELIKIGTSASTKRSLKYAKKKLG-THKR 107
Score = 34.7 bits (76), Expect = 0.77
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -1
Query: 140 TSVXLKXLKRRLGTHIRAKRKREELSNVXAQMRK 39
T LK K++LGTH R K KREE+ V R+
Sbjct: 91 TKRSLKYAKKKLGTHKRGKAKREEIQKVVILQRR 124
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 39.5 bits (88), Expect = 0.027
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = -3
Query: 231 HSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRATEVLEATIGH 100
H +FV+ +++E G A YE +ELL+++KD+ A + +G+
Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNKDRHALRYAKKRLGN 72
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 39.1 bits (87), Expect = 0.036
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -1
Query: 152 RCQKTSVXLKXLKRRLGTHIRAKRKREELSNVXAQMRK 39
+ K LK +++ LGTHI AKRK ELSNV A R+
Sbjct: 68 KVSKDKQALKFIQKMLGTHICAKRKARELSNVLATTRE 105
Score = 38.7 bits (86), Expect = 0.047
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = -3
Query: 309 ISAGRKGITDKAIRIRPARLKGLQTKHS-KFVRDLVREVVGHAQYEKRAMELLKVSKDKR 133
++ G+KG T + R + G KH+ +F +D+++EV A E+ A E KVSKDK+
Sbjct: 16 LNKGQKG-TKVMTQPRHSCGLGHLIKHTTEFSQDVIQEVFSFALNEQHATEQFKVSKDKQ 74
Query: 132 ATEVLEATIGHTH 94
A + ++ +G TH
Sbjct: 75 ALKFIQKMLG-TH 86
>UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L36 - Entamoeba
histolytica
Length = 103
Score = 38.7 bits (86), Expect = 0.047
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -3
Query: 237 TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRATEVLEATIGHTHPRQEEA 76
TK V D++RE G YE+ M+LL+ DK+A + T +T R +A
Sbjct: 25 TKRKHVVNDVIREACGFPAYERHMMDLLRRGLDKKALNYAKKTSWYTQKRTCQA 78
>UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 34.7 bits (76), Expect = 0.77
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -3
Query: 366 MAPRFEIAVGLRKGHKTTK 310
MAP+ E+AVGL+KGHK TK
Sbjct: 155 MAPKVEMAVGLQKGHKVTK 173
>UniRef50_Q4Q6P1 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 859
Score = 33.9 bits (74), Expect = 1.3
Identities = 28/98 (28%), Positives = 48/98 (48%)
Frame = -3
Query: 372 EIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVV 193
E + E VG KG +T + RK + K I + A L L+ K ++ +++ V+ V
Sbjct: 453 EFSIQQMEKRVGRAKGERTEE---ERKELRGK-IDLLQATLDELE-KQNRILQNQVKRVR 507
Query: 192 GHAQYEKRAMELLKVSKDKRATEVLEATIGHTHPRQEE 79
+ +E L+++K + EVLE + TH +EE
Sbjct: 508 EEMRQSAMLIEKLEMTKKRALEEVLEMDLHCTHDEREE 545
>UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma
brucei|Rep: PTGT-4 protein - Trypanosoma brucei
Length = 508
Score = 33.5 bits (73), Expect = 1.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 8 NGDGDEPGRLPSSSERARC*VLHASSWR 91
+G GD P + P SS + RC L SSWR
Sbjct: 99 HGKGDRPSQKPKSSSQKRCRHLSGSSWR 126
>UniRef50_Q9U2C1 Cluster: Putative uncharacterized protein smc-3;
n=3; Caenorhabditis|Rep: Putative uncharacterized
protein smc-3 - Caenorhabditis elegans
Length = 1205
Score = 31.5 bits (68), Expect = 7.2
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 267 IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKD-KRATEVLEATIGHTHP 91
++ ++ L T + L+REV G Y++R E LK+ K+ K TE ++ + +
Sbjct: 140 VKQGKINELATSPDAYKLKLLREVAGTRVYDERKEESLKILKETKMKTEKIQGLLKYIDE 199
Query: 90 R 88
R
Sbjct: 200 R 200
>UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium
197N|Rep: Phage protein - Bordetella avium (strain 197N)
Length = 416
Score = 31.1 bits (67), Expect = 9.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 273 IRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 181
+R ARL G+QTKH+K D V+ AQ
Sbjct: 286 LRAAQARLAGIQTKHAKAAADAATAVIKRAQ 316
>UniRef50_Q0CS71 Cluster: Predicted protein; n=6;
Trichocomaceae|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 392
Score = 31.1 bits (67), Expect = 9.5
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = -3
Query: 393 FLRICQSEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVR 214
FLR+ E++ PR A GL+ T + G ++ + PA K + K+
Sbjct: 224 FLRVLTIEMLPPRIREAYGLKSTAGTRALYRTTMGF---SVAVYPALPKSTRRYPWKYYL 280
Query: 213 DLVREVVG-HAQYEKRAMELLKVSKDKRATEVLEATIGHTHPR 88
D +R+ + + ++ ++LL+V ++ E+L H R
Sbjct: 281 DELRKHLNVRIRIVQQPLDLLQVVARQQIGEILRVVAAQQHGR 323
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 375,081,368
Number of Sequences: 1657284
Number of extensions: 6519657
Number of successful extensions: 15978
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 15706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15968
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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