Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_K06
         (419 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    25   0.35 
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    22   2.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   3.2  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   7.5  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   7.5  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   7.5  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   7.5  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   7.5  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   7.5  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   7.5  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   7.5  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 25.0 bits (52), Expect = 0.35
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 352 KTRSHDFGLTDPKKKHRPAE 411
           K RS DF L D K+  RP E
Sbjct: 49  KFRSGDFSLKDEKRSGRPVE 68


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 337 PAKRPQNN*NIRWPQGY 287
           P + P N   I+WPQGY
Sbjct: 38  PGQGPFNP-KIKWPQGY 53


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 252 LKGLQT-KHSKFVRDLVREVVGHAQYEKRAME 160
           +K ++T K   FV   V EV+ + + EKR  E
Sbjct: 510 VKTMKTIKKGSFVTQYVGEVITNEEAEKRGKE 541


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 119 LKRRLGTHIRAKRKREELSNV 57
           LKRR G   +   +REE+ N+
Sbjct: 159 LKRRTGEGSKPIFEREEIKNI 179


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 119 LKRRLGTHIRAKRKREELSNV 57
           LKRR G   +   +REE+ N+
Sbjct: 159 LKRRTGEGSKPIFEREEIKNI 179


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 119 LKRRLGTHIRAKRKREELSNV 57
           LKRR G   +   +REE+ N+
Sbjct: 159 LKRRTGEGSKPIFEREEIKNI 179


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 119 LKRRLGTHIRAKRKREELSNV 57
           LKRR G   +   +REE+ N+
Sbjct: 159 LKRRTGEGSKPIFEREEIKNI 179


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 119 LKRRLGTHIRAKRKREELSNV 57
           LKRR G   +   +REE+ N+
Sbjct: 159 LKRRTGEGSKPIFEREEIKNI 179


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 119 LKRRLGTHIRAKRKREELSNV 57
           LKRR G   +   +REE+ N+
Sbjct: 159 LKRRTGEGSKPIFEREEIKNI 179


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 119 LKRRLGTHIRAKRKREELSNV 57
           LKRR G   +   +REE+ N+
Sbjct: 159 LKRRTGEGSKPIFEREEIKNI 179


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 119 LKRRLGTHIRAKRKREELSNV 57
           LKRR G   +   +REE+ N+
Sbjct: 159 LKRRTGEGSKPIFEREEIKNI 179


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,347
Number of Sequences: 438
Number of extensions: 1733
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)