Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_K04
         (725 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   5.1  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              22   6.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.0  

>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -3

Query: 420 NRNNTIEITIARFNYSNRYFISLLNRS*KSFVHNIIS 310
           + NN  +      NY+N  + +  N + K   +NII+
Sbjct: 324 HNNNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYNIIN 360


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 382 ESCYCYFNCII 414
           E   CYFNC++
Sbjct: 66  EKLKCYFNCVL 76


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 435 TSVLNNRNNT 406
           T V+NNRNNT
Sbjct: 486 TIVINNRNNT 495


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,314
Number of Sequences: 438
Number of extensions: 3549
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)