BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_K03
(708 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 25 3.1
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 24 5.4
EF034031-1|ABK32002.1| 70|Anopheles gambiae serpin 4A protein. 23 9.4
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 9.4
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 23 9.4
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 24.6 bits (51), Expect = 3.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 355 IQIVPPKTQLLSIKTTNNRYSL*FRIGSM 269
+QI P KT+ + I +T N + R+G +
Sbjct: 761 LQIAPEKTECVLISSTKNPTQVTIRVGDV 789
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 23.8 bits (49), Expect = 5.4
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -2
Query: 80 FFLTFLLCINVKLLXSLHYREPP 12
+ + L+ +N +L + HYR+PP
Sbjct: 489 WLIIILVFLNTGVLATEHYRQPP 511
>EF034031-1|ABK32002.1| 70|Anopheles gambiae serpin 4A protein.
Length = 70
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 234 FVYKNKIVKHLTIE 275
FVY N+IV H+T++
Sbjct: 4 FVYVNEIVTHVTLD 17
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.0 bits (47), Expect = 9.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 524 WLKHSFHQIEFYARFRFIFYDRKVTQQIRMTHVAAARVA 640
W K + H E++A FY+ +TQ +HV + VA
Sbjct: 1741 WTKLTSHLKEYFA-----FYENFITQVHGTSHVMSGMVA 1774
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 23.0 bits (47), Expect = 9.4
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 190 EIKTDFFEIKQYETSLYTKIRLSNI*PLNQF*TINYT 300
E+ + FE+K+Y S + + ++ PL + +N T
Sbjct: 208 ELVSKTFEVKEYVLSTFDVQVMPSVIPLEEHQAVNLT 244
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,894
Number of Sequences: 2352
Number of extensions: 13389
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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