BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_pT_J24 (651 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 68 6e-12 03_01_0034 + 318432-318825,318902-319851 68 6e-12 01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 68 6e-12 01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 68 6e-12 06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 67 1e-11 03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 67 1e-11 02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 67 1e-11 03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 64 7e-11 11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 36 0.028 07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 36 0.028 03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 36 0.028 03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 36 0.028 02_05_1127 + 34292894-34293284,34293948-34295443 29 2.4 08_02_1050 + 23949828-23949981,23950083-23950534,23951599-239516... 29 3.2 07_03_1027 - 23371826-23372006,23372110-23372171,23372595-233743... 29 4.2 09_03_0006 + 11426346-11426420,11426733-11427452 27 9.8 03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 27 9.8 02_04_0470 - 23183925-23184743,23184929-23185153 27 9.8 >05_04_0306 + 20058640-20059159,20060406-20060819,20060921-20061190, 20062179-20062849 Length = 624 Score = 68.1 bits (159), Expect = 6e-12 Identities = 29/29 (100%), Positives = 29/29 (100%) Frame = -2 Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561 WYTGEGMDEMEFTEAESNMNDLVSEYQQY Sbjct: 577 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 605 >03_01_0034 + 318432-318825,318902-319851 Length = 447 Score = 68.1 bits (159), Expect = 6e-12 Identities = 29/29 (100%), Positives = 29/29 (100%) Frame = -2 Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561 WYTGEGMDEMEFTEAESNMNDLVSEYQQY Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 425 >01_06_1060 + 34162161-34162554,34162613-34162675,34163262-34163531, 34163944-34164623 Length = 468 Score = 68.1 bits (159), Expect = 6e-12 Identities = 29/29 (100%), Positives = 29/29 (100%) Frame = -2 Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561 WYTGEGMDEMEFTEAESNMNDLVSEYQQY Sbjct: 418 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 446 >01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 Length = 447 Score = 68.1 bits (159), Expect = 6e-12 Identities = 29/29 (100%), Positives = 29/29 (100%) Frame = -2 Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561 WYTGEGMDEMEFTEAESNMNDLVSEYQQY Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 425 >06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 Length = 446 Score = 66.9 bits (156), Expect = 1e-11 Identities = 28/29 (96%), Positives = 29/29 (100%) Frame = -2 Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561 WYTGEGMDEMEFTEAESNMNDLV+EYQQY Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVAEYQQY 425 >03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 Length = 444 Score = 66.9 bits (156), Expect = 1e-11 Identities = 28/29 (96%), Positives = 29/29 (100%) Frame = -2 Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561 WYTGEGMDEMEFTEAESNMNDLV+EYQQY Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVAEYQQY 425 >02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 Length = 447 Score = 66.9 bits (156), Expect = 1e-11 Identities = 28/29 (96%), Positives = 29/29 (100%) Frame = -2 Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561 WYTGEGMDEMEFTEAESNMNDLV+EYQQY Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVAEYQQY 425 >03_05_0575 + 25747813-25748206,25748567-25748614,25750296-25750565, 25750658-25751334 Length = 462 Score = 64.5 bits (150), Expect = 7e-11 Identities = 27/29 (93%), Positives = 28/29 (96%) Frame = -2 Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561 WYT EGMDEMEFTEAESNMNDLV+EYQQY Sbjct: 413 WYTSEGMDEMEFTEAESNMNDLVAEYQQY 441 >11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535, 7881648-7882304 Length = 451 Score = 35.9 bits (79), Expect = 0.028 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = -2 Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564 WY GEGM+E EF+EA ++ L +Y++ Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434 >07_03_0994 + 23190344-23190456,23191367-23191581,23191663-23191862, 23192420-23192928,23193048-23193363 Length = 450 Score = 35.9 bits (79), Expect = 0.028 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = -2 Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564 WY GEGM+E EF+EA ++ L +Y++ Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434 >03_05_0974 + 29324025-29324117,29325064-29325298,29325385-29325755, 29325864-29326520 Length = 451 Score = 35.9 bits (79), Expect = 0.028 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = -2 Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564 WY GEGM+E EF+EA ++ L +Y++ Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434 >03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557, 6245482-6245681,6246125-6246519,6246776-6246888 Length = 530 Score = 35.9 bits (79), Expect = 0.028 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = -2 Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564 WY GEGM+E EF+EA ++ L +Y++ Sbjct: 488 WYVGEGMEEGEFSEAREDLAALEKDYEE 515 >02_05_1127 + 34292894-34293284,34293948-34295443 Length = 628 Score = 29.5 bits (63), Expect = 2.4 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +2 Query: 524 RQTLRPRRRWPPGTVGTRRQG 586 R T +P+RRWPPG+ G +G Sbjct: 83 RATGQPKRRWPPGSSGGGARG 103 >08_02_1050 + 23949828-23949981,23950083-23950534,23951599-23951631, 23952069-23952179,23953175-23953348 Length = 307 Score = 29.1 bits (62), Expect = 3.2 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +2 Query: 506 SPAPAPRQTLRPRRRWPP 559 SP+P+P + P RRWPP Sbjct: 27 SPSPSPLLSRAPSRRWPP 44 >07_03_1027 - 23371826-23372006,23372110-23372171,23372595-23374335, 23374609-23374704,23374967-23375043,23376807-23377307 Length = 885 Score = 28.7 bits (61), Expect = 4.2 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 503 RSPAPAPRQTLRPRRRWPPGTVGT 574 R+PAP PR+ +R R R P V T Sbjct: 31 RAPAPPPREVVRVRLRLTPAPVAT 54 >09_03_0006 + 11426346-11426420,11426733-11427452 Length = 264 Score = 27.5 bits (58), Expect = 9.8 Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 2/32 (6%) Frame = +2 Query: 476 RLVKGLSCPRSPAPAPRQ--TLRPRRRWPPGT 565 RL G CP S AP+P Q LR RR PP T Sbjct: 110 RLAVGHRCPDSSAPSPPQPGALRWHRR-PPST 140 >03_05_0754 + 27452203-27452242,27452360-27455611,27456480-27456533, 27456774-27456872,27456948-27457012,27457476-27457575, 27458326-27458408,27458494-27458569,27458920-27459698 Length = 1515 Score = 27.5 bits (58), Expect = 9.8 Identities = 21/47 (44%), Positives = 24/47 (51%) Frame = +2 Query: 440 GGKGGYLI*RRERLVKGLSCPRSPAPAPRQTLRPRRRWPPGTVGTRR 580 GG G L R +L +G PR A A R + RR PPG GTRR Sbjct: 1438 GGGAGLLRQPRRQLAEGT--PRGTARA-RVSPPTYRRPPPGPHGTRR 1481 >02_04_0470 - 23183925-23184743,23184929-23185153 Length = 347 Score = 27.5 bits (58), Expect = 9.8 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +2 Query: 500 PRSPAPAPRQTLRPRRRWPP 559 PR P P P+ RP RR PP Sbjct: 261 PRPPPPPPKARRRPCRRRPP 280 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,964,302 Number of Sequences: 37544 Number of extensions: 246731 Number of successful extensions: 801 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 776 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 801 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1620349964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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