Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_J24
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 68 5e-12
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 68 5e-12
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 68 5e-12
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 68 5e-12
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 68 7e-12
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 68 7e-12
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 43 2e-04
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 43 2e-04
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 38 0.008
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 38 0.008
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 38 0.008
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 38 0.008
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 38 0.008
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 38 0.008
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 37 0.011
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 37 0.011
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 36 0.025
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 36 0.025
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 36 0.025
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 36 0.025
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 36 0.025
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 36 0.025
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical p... 27 8.7
Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical pr... 27 8.7
AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561
WYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561
WYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561
WYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561
WYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 67.7 bits (158), Expect = 7e-12
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561
WYTGEGMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 67.7 bits (158), Expect = 7e-12
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561
WYTGEGMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561
WYT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 395 WYT---MEESEFTDAENKVNDLISEFQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQY 561
WYT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 395 WYT---MEESEFTDAENKVNDLISEFQQY 420
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EFTEA ++ L +Y++
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EFTEA ++ L +Y++
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EFTEA ++ L +Y++
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EFTEA ++ L +Y++
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EFTEA ++ L +Y++
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EFTEA ++ L +Y++
Sbjct: 405 WYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EFTEA ++ L +Y++
Sbjct: 42 WYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EF+EA +M L +Y++
Sbjct: 413 WYVGEGMEEGEFSEAREDMAALEKDYEE 440
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EF+EA +M L +Y++
Sbjct: 407 WYVGEGMEEGEFSEAREDMAALEKDYEE 434
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EF+EA +M L +Y++
Sbjct: 385 WYVGEGMEEGEFSEAREDMAALEKDYEE 412
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 35.9 bits (79), Expect = 0.025
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 402 WYVGEGMEEGEFSEAREDLAALEKDYEE 429
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 35.9 bits (79), Expect = 0.025
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 35.9 bits (79), Expect = 0.025
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 412 WYVGEGMEEGEFSEAREDLAALEKDYEE 439
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 35.9 bits (79), Expect = 0.025
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 406 WYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 35.9 bits (79), Expect = 0.025
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 35.9 bits (79), Expect = 0.025
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 407 WYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 32.3 bits (70), Expect = 0.31
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 647 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 564
W+ GEGM+E EF EA ++ L +Y +
Sbjct: 410 WFVGEGMEEGEFMEARDDLAALEKDYAE 437
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 136 YLRCNFSSSFCNQCDELLAFSNE 68
YLRC++ +S QC E FSN+
Sbjct: 1126 YLRCSYGASKLQQCSEDRVFSND 1148
>Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 478 TLSSLY*ITPLSTSRLSRDPQYFCFSYLYSNF 383
TLSS++ + P ++ Q++ FS +YSNF
Sbjct: 772 TLSSMFKLDPPFADNVTDIDQHYFFSNIYSNF 803
>Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 478 TLSSLY*ITPLSTSRLSRDPQYFCFSYLYSNF 383
TLSS++ + P ++ Q++ FS +YSNF
Sbjct: 772 TLSSMFKLDPPFADNVTDIDQHYFFSNIYSNF 803
>AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical
protein Y116F11B.3 protein.
Length = 1042
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 475 LSSLY*ITPLSTSRLSRDPQYFCFSYLYSNF 383
LS ++ + P + ++ Q+F FS LYSNF
Sbjct: 742 LSKIFQLLPGFSENVTETDQHFFFSNLYSNF 772
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,129,162
Number of Sequences: 27780
Number of extensions: 215668
Number of successful extensions: 597
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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