BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_J22
(515 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021382-1|AAX33530.1| 1449|Drosophila melanogaster LD40485p pro... 32 0.53
AE013599-2992|AAF57485.1| 1449|Drosophila melanogaster CG16868-P... 32 0.53
>BT021382-1|AAX33530.1| 1449|Drosophila melanogaster LD40485p
protein.
Length = 1449
Score = 31.9 bits (69), Expect = 0.53
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = -2
Query: 430 TCKSRTRQLRYNSAIIAAMSQPGRTKKDCGLVYQQLSEDLTGPATPKLSRY----APLHS 263
T ++ + RYN + +PG + L+Y +L + G A PK RY A + +
Sbjct: 704 TLRNVSSTQRYNLKDTVSNYEPGYYGESMDLLYHRLDLNQGGSAPPKTCRYFRQVATMDA 763
Query: 262 VTVNASNMSYESS-PFHHNN 206
T+ S ++ES F HNN
Sbjct: 764 PTLFLSAAAFESPFGFLHNN 783
>AE013599-2992|AAF57485.1| 1449|Drosophila melanogaster CG16868-PA
protein.
Length = 1449
Score = 31.9 bits (69), Expect = 0.53
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = -2
Query: 430 TCKSRTRQLRYNSAIIAAMSQPGRTKKDCGLVYQQLSEDLTGPATPKLSRY----APLHS 263
T ++ + RYN + +PG + L+Y +L + G A PK RY A + +
Sbjct: 704 TLRNVSSTQRYNLKDTVSNYEPGYYGESMDLLYHRLDLNQGGSAPPKTCRYFRQVATMDA 763
Query: 262 VTVNASNMSYESS-PFHHNN 206
T+ S ++ES F HNN
Sbjct: 764 PTLFLSAAAFESPFGFLHNN 783
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,644,076
Number of Sequences: 53049
Number of extensions: 459855
Number of successful extensions: 1292
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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