Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_J21
         (557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    69   8e-14
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    28   0.18 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.42 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   0.96 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    26   0.96 
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     25   2.2  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 69.3 bits (162), Expect = 8e-14
 Identities = 33/68 (48%), Positives = 40/68 (58%)
 Frame = -1

Query: 401 SHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFECRVCNRRFMRSDH 222
           S LK H RTHTGE+PF+C  P C        +L+RH R HTGEK + C VC  RF +S+ 
Sbjct: 225 SKLKRHIRTHTGEKPFQC--PHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNS 282

Query: 221 LAKHVKRH 198
           L  H   H
Sbjct: 283 LKAHKMIH 290



 Score = 61.7 bits (143), Expect = 2e-11
 Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
 Frame = -1

Query: 446 YECSYPGCGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKK 267
           Y C+Y  C     K   L  H +TH+ +RP +C    CER F     L  H  THTG K 
Sbjct: 127 YMCNY--CNYTSNKLFLLSRHLKTHSEDRPHKCVV--CERGFKTLASLQNHVNTHTGTKP 182

Query: 266 FECRVCNRRFMRSDHLAKHVK-RHAKEK 186
             C+ C+  F  S  L +H++ RH  E+
Sbjct: 183 HRCKHCDNCFTTSGELIRHIRYRHTHER 210



 Score = 54.4 bits (125), Expect = 2e-09
 Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = -1

Query: 425 CGKNYFKSSHLKAHAR-THTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFECRVC 249
           C   +  S  L  H R  HT ERP +C    C+       +L RH RTHTGEK F+C  C
Sbjct: 188 CDNCFTTSGELIRHIRYRHTHERPHKCT--ECDYASVELSKLKRHIRTHTGEKPFQCPHC 245

Query: 248 NRRFMRSDHLAKHVKRHAKEK 186
                    L +H++ H  EK
Sbjct: 246 TYASPDKFKLTRHMRIHTGEK 266



 Score = 46.4 bits (105), Expect = 6e-07
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
 Frame = -1

Query: 425 CGKNYFKSSHLKAHART-HTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFECRVC 249
           C     + + L+ H +  HT ++P +C    C+  F        H +TH GEK + C  C
Sbjct: 303 CPTTCGRKTDLRIHVQNLHTADKPIKCK--RCDSTFPDRYSYKMHAKTHEGEKCYRCEYC 360

Query: 248 NRRFMRSDHLAKHVKRHAKEK 186
               +   HL  H+  H  +K
Sbjct: 361 PYASISMRHLESHLLLHTDQK 381



 Score = 44.4 bits (100), Expect = 3e-06
 Identities = 21/73 (28%), Positives = 33/73 (45%)
 Frame = -1

Query: 425 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKRTHTGEKKFECRVCN 246
           C   +      K HA+TH GE+ +RC +  C         L  H   HT +K ++C  C 
Sbjct: 332 CDSTFPDRYSYKMHAKTHEGEKCYRCEY--CPYASISMRHLESHLLLHTDQKPYKCDQCA 389

Query: 245 RRFMRSDHLAKHV 207
           + F +   L +H+
Sbjct: 390 QTFRQKQLLKRHM 402


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 28.3 bits (60), Expect = 0.18
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 269 KFECRVCNRRFMRSDHLAKHVK 204
           +FEC +C   + RSD+L  H K
Sbjct: 523 RFECPLCRATYTRSDNLRTHCK 544



 Score = 26.2 bits (55), Expect = 0.73
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -1

Query: 425 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRH 294
           CGK     +H++ H   H   R F C  P C   ++RSD L  H
Sbjct: 505 CGKVV---THIRNHYHVHFPGR-FEC--PLCRATYTRSDNLRTH 542


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 27.1 bits (57), Expect = 0.42
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 296  HKRTHTGEKKFECRVCNRRFMRSDHLAKHVK 204
            H   H  +   EC VC ++F R D++  H K
Sbjct: 914  HANIHRPQSH-ECPVCGQKFTRRDNMKAHCK 943



 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 446 YECSYPGCGKNYFKSSHLKAHAR 378
           +EC  P CG+ + +  ++KAH +
Sbjct: 923 HEC--PVCGQKFTRRDNMKAHCK 943



 Score = 22.6 bits (46), Expect = 9.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 386 HARTHTGERPFRCAWPGCERRFSRSDELSRH 294
           HA  H   RP     P C ++F+R D +  H
Sbjct: 914 HANIH---RPQSHECPVCGQKFTRRDNMKAH 941


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.8 bits (54), Expect = 0.96
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = -1

Query: 425 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKR 288
           CGK      H   H  +HT   P R   P C   +SR D L  H R
Sbjct: 532 CGKEVTNRWH---HFHSHT---PQRSLCPYCPASYSRIDTLRSHLR 571


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.8 bits (54), Expect = 0.96
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = -1

Query: 425 CGKNYFKSSHLKAHARTHTGERPFRCAWPGCERRFSRSDELSRHKR 288
           CGK      H   H  +HT   P R   P C   +SR D L  H R
Sbjct: 508 CGKEVTNRWH---HFHSHT---PQRSLCPYCPASYSRIDTLRSHLR 547


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 335 CERRFSRSDELSRHKRTHTGEKKFE 261
           CER FS++ ++   KR+    KK +
Sbjct: 570 CERLFSKAGQIYSEKRSRLAPKKLQ 594


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,848
Number of Sequences: 2352
Number of extensions: 5287
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)