Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_J20
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35639-3|CAA84695.2| 780|Caenorhabditis elegans Hypothetical pr... 184 7e-47
U58083-1|AAC47120.1| 780|Caenorhabditis elegans CUL-1 protein. 184 7e-47
Z92822-4|CAD18893.2| 791|Caenorhabditis elegans Hypothetical pr... 171 3e-43
Z92822-3|CAB07302.3| 774|Caenorhabditis elegans Hypothetical pr... 171 3e-43
Z92822-2|CAB70188.2| 850|Caenorhabditis elegans Hypothetical pr... 171 3e-43
Z92822-5|CAD45612.3| 743|Caenorhabditis elegans Hypothetical pr... 163 1e-40
U58084-1|AAC47121.1| 743|Caenorhabditis elegans CUL-2 protein. 161 6e-40
Z77666-5|CAB01230.1| 729|Caenorhabditis elegans Hypothetical pr... 157 7e-39
AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protei... 104 3e-25
Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical pr... 101 5e-22
U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein. 101 5e-22
U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein ... 101 5e-22
U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein. 95 4e-20
Z81085-3|CAB03115.1| 769|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 31 0.61
AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical ... 31 0.80
AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical ... 31 1.1
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 31 1.1
Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL110490-16|CAB54451.2| 922|Caenorhabditis elegans Hypothetical... 30 1.9
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 30 1.9
AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical ... 29 2.4
AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical ... 29 3.2
Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 4.3
U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical pr... 29 4.3
U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family pr... 29 4.3
AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical ... 29 4.3
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 28 5.7
U58758-1|AAB93429.2| 819|Caenorhabditis elegans Hypothetical pr... 28 5.7
U39855-3|AAA81082.1| 467|Caenorhabditis elegans Patterned expre... 28 5.7
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z79754-1|CAB02090.1| 457|Caenorhabditis elegans Hypothetical pr... 28 7.5
U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical pr... 28 7.5
AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRN... 28 7.5
Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 27 9.9
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 27 9.9
>Z35639-3|CAA84695.2| 780|Caenorhabditis elegans Hypothetical protein
D2045.6 protein.
Length = 780
Score = 184 bits (447), Expect = 7e-47
Identities = 92/225 (40%), Positives = 139/225 (61%), Gaps = 4/225 (1%)
Frame = -2
Query: 703 TSFQLPTEXERSVHRFTTFYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAV 524
T LP + +++ F FY+ + +GR+L W+Y+ S+GE+ + F +Y A+T QM
Sbjct: 556 TPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCT 615
Query: 523 LLQYNDNTSWTVRQLEQHTGIKGDFLIQVLQILLKAKLLVCQED---EAELGENSVVDLY 353
+L +N+ S+TV Q+ T + ++ L+K +L + E E+ + V L
Sbjct: 616 MLLFNEQDSYTVEQIAAATKMDEKSAPAIVGSLIKNLVLKADTELQKEDEVPMTATVSLN 675
Query: 352 SGYKNKKLRVNIN-IPLKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLV 176
Y NKK+RV+++ +K + + E K++EEDRK +I A IVRIMKTRK ++HQ L+
Sbjct: 676 KAYMNKKVRVDLSKFTMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQLM 735
Query: 175 VEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 41
EV+ QLS RFKP+V +IK+CI LIEKEY+ RTEG+KD Y YLA
Sbjct: 736 TEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTEGQKDLYEYLA 780
>U58083-1|AAC47120.1| 780|Caenorhabditis elegans CUL-1 protein.
Length = 780
Score = 184 bits (447), Expect = 7e-47
Identities = 92/225 (40%), Positives = 139/225 (61%), Gaps = 4/225 (1%)
Frame = -2
Query: 703 TSFQLPTEXERSVHRFTTFYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAV 524
T LP + +++ F FY+ + +GR+L W+Y+ S+GE+ + F +Y A+T QM
Sbjct: 556 TPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCT 615
Query: 523 LLQYNDNTSWTVRQLEQHTGIKGDFLIQVLQILLKAKLLVCQED---EAELGENSVVDLY 353
+L +N+ S+TV Q+ T + ++ L+K +L + E E+ + V L
Sbjct: 616 MLLFNEQDSYTVEQIAAATKMDEKSAPAIVGSLIKNLVLKADTELQKEDEVPMTATVSLN 675
Query: 352 SGYKNKKLRVNIN-IPLKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLV 176
Y NKK+RV+++ +K + + E K++EEDRK +I A IVRIMKTRK ++HQ L+
Sbjct: 676 KAYMNKKVRVDLSKFTMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQLM 735
Query: 175 VEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 41
EV+ QLS RFKP+V +IK+CI LIEKEY+ RTEG+KD Y YLA
Sbjct: 736 TEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTEGQKDLYEYLA 780
>Z92822-4|CAD18893.2| 791|Caenorhabditis elegans Hypothetical protein
ZK520.4c protein.
Length = 791
Score = 171 bits (417), Expect = 3e-43
Identities = 85/221 (38%), Positives = 132/221 (59%), Gaps = 1/221 (0%)
Frame = -2
Query: 700 SFQLPTEXERSVHRFTTFYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVL 521
+F LP + + F FY+ +H+GRKL WL+NMS+G++ +Y Q +QMA L
Sbjct: 574 NFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAAL 633
Query: 520 LQYNDNTSWTVRQLEQHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYK 341
L + + V+ + + G+ GD+L++ ++ +L LL C D+ L +S+V L
Sbjct: 634 LCFERRDAILVKDIGEEIGVSGDYLLKTIRTILDVTLLTC--DDQNLTADSLVRLNMSMT 691
Query: 340 NKKLRVNINIP-LKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVL 164
+K+++ + P + ++ EQEA + +DRK ++ AIVRIMKTRK LKH LV E++
Sbjct: 692 SKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIM 751
Query: 163 NQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 41
+Q RF P VP IKK I+ LIEK Y++RT+ + D Y YLA
Sbjct: 752 DQTKGRFSPDVPFIKKSIEDLIEKMYIQRTD-QNDEYQYLA 791
>Z92822-3|CAB07302.3| 774|Caenorhabditis elegans Hypothetical protein
ZK520.4b protein.
Length = 774
Score = 171 bits (417), Expect = 3e-43
Identities = 85/221 (38%), Positives = 132/221 (59%), Gaps = 1/221 (0%)
Frame = -2
Query: 700 SFQLPTEXERSVHRFTTFYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVL 521
+F LP + + F FY+ +H+GRKL WL+NMS+G++ +Y Q +QMA L
Sbjct: 557 NFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAAL 616
Query: 520 LQYNDNTSWTVRQLEQHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYK 341
L + + V+ + + G+ GD+L++ ++ +L LL C D+ L +S+V L
Sbjct: 617 LCFERRDAILVKDIGEEIGVSGDYLLKTIRTILDVTLLTC--DDQNLTADSLVRLNMSMT 674
Query: 340 NKKLRVNINIP-LKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVL 164
+K+++ + P + ++ EQEA + +DRK ++ AIVRIMKTRK LKH LV E++
Sbjct: 675 SKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIM 734
Query: 163 NQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 41
+Q RF P VP IKK I+ LIEK Y++RT+ + D Y YLA
Sbjct: 735 DQTKGRFSPDVPFIKKSIEDLIEKMYIQRTD-QNDEYQYLA 774
>Z92822-2|CAB70188.2| 850|Caenorhabditis elegans Hypothetical protein
ZK520.4a protein.
Length = 850
Score = 171 bits (417), Expect = 3e-43
Identities = 85/221 (38%), Positives = 132/221 (59%), Gaps = 1/221 (0%)
Frame = -2
Query: 700 SFQLPTEXERSVHRFTTFYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVL 521
+F LP + + F FY+ +H+GRKL WL+NMS+G++ +Y Q +QMA L
Sbjct: 633 NFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAAL 692
Query: 520 LQYNDNTSWTVRQLEQHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYK 341
L + + V+ + + G+ GD+L++ ++ +L LL C D+ L +S+V L
Sbjct: 693 LCFERRDAILVKDIGEEIGVSGDYLLKTIRTILDVTLLTC--DDQNLTADSLVRLNMSMT 750
Query: 340 NKKLRVNINIP-LKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVL 164
+K+++ + P + ++ EQEA + +DRK ++ AIVRIMKTRK LKH LV E++
Sbjct: 751 SKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIM 810
Query: 163 NQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 41
+Q RF P VP IKK I+ LIEK Y++RT+ + D Y YLA
Sbjct: 811 DQTKGRFSPDVPFIKKSIEDLIEKMYIQRTD-QNDEYQYLA 850
>Z92822-5|CAD45612.3| 743|Caenorhabditis elegans Hypothetical protein
ZK520.4d protein.
Length = 743
Score = 163 bits (395), Expect = 1e-40
Identities = 82/212 (38%), Positives = 127/212 (59%), Gaps = 3/212 (1%)
Frame = -2
Query: 667 VHRFTTFYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVLLQYNDNTSWTV 488
+ F FY+ +H+GRKL WL+NMS+G++ +Y Q +QMA LL + + V
Sbjct: 535 IQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRDAILV 594
Query: 487 RQLEQHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIP 308
+ + + G+ GD+L++ ++ +L LL C D+ L +S+V L +K+++ + P
Sbjct: 595 KDIGEEIGVSGDYLLKTIRTILDVTLLTC--DDQNLTADSLVRLNMSMTSKRMKFRLQAP 652
Query: 307 -LKTELKVEQEATHK--HIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKP 137
+ ++ EQEA + +DRK ++ AIVRIMKTRK LKH LV E+++Q RF P
Sbjct: 653 QVNKAVEKEQEAVANTFQVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSP 712
Query: 136 RVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 41
VP IKK I+ LIEK Y++RT+ + D Y YLA
Sbjct: 713 DVPFIKKSIEDLIEKMYIQRTD-QNDEYQYLA 743
>U58084-1|AAC47121.1| 743|Caenorhabditis elegans CUL-2 protein.
Length = 743
Score = 161 bits (390), Expect = 6e-40
Identities = 81/212 (38%), Positives = 127/212 (59%), Gaps = 3/212 (1%)
Frame = -2
Query: 667 VHRFTTFYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVLLQYNDNTSWTV 488
+ F FY+ +H+GRKL WL+NMS+G++ ++ Q +QMA LL + + V
Sbjct: 535 IQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQHVAQMYVYQMAALLCFERRDAILV 594
Query: 487 RQLEQHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIP 308
+ + + G+ GD+L++ ++ +L LL C D+ L +S+V L +K+++ + P
Sbjct: 595 KDIGEEIGVSGDYLLKTIRTILDVTLLTC--DDQNLTADSLVRLNMSMTSKRMKFRLQAP 652
Query: 307 -LKTELKVEQEATHK--HIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKP 137
+ ++ EQEA + +DRK ++ AIVRIMKTRK LKH LV E+++Q RF P
Sbjct: 653 QVNKAVEKEQEAVANTFQVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSP 712
Query: 136 RVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 41
VP IKK I+ LIEK Y++RT+ + D Y YLA
Sbjct: 713 DVPFIKKSIEDLIEKMYIQRTD-QNDEYQYLA 743
>Z77666-5|CAB01230.1| 729|Caenorhabditis elegans Hypothetical protein
K08E7.7 protein.
Length = 729
Score = 157 bits (381), Expect = 7e-39
Identities = 83/222 (37%), Positives = 131/222 (59%), Gaps = 5/222 (2%)
Frame = -2
Query: 691 LPTEXERSVHRFTTFYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVLLQY 512
LP E + F TFY++ H+GR+LNW Y+ +GE+ + F+ +Y + Q+ L +
Sbjct: 508 LPRELSTILKEFDTFYNASHNGRRLNWAYSQCRGEVNSKAFEKKYVFIVTASQLCTLYLF 567
Query: 511 NDNTSWTVRQLE---QHTGIKGDFLIQVLQILLKAKLLVCQEDEAE-LGENSVVDLYSGY 344
N+ S+T+ Q+ + T ++ L ++ L+V + +E + ++VV L + Y
Sbjct: 568 NEQDSFTIEQISKAIEMTAKSTSAIVGSLNPVIDPVLVVDKGNEKDGYPPDAVVSLNTKY 627
Query: 343 KNKKLRVNINIPLK-TELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEV 167
NKK+RV++ +K E +A +E DRK I+A IVRIMKTRK+L H L+ E+
Sbjct: 628 ANKKVRVDLTTAIKKATADRETDAVQNTVESDRKYEIKACIVRIMKTRKSLTHTLLINEI 687
Query: 166 LNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 41
++QL SRF P V +IK CI+ILIE+ Y+ R+E E + Y YLA
Sbjct: 688 ISQLKSRFTPNVQMIKICIEILIEQLYIRRSENEHNVYEYLA 729
>AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protein 3
protein.
Length = 777
Score = 104 bits (249), Expect(2) = 3e-25
Identities = 70/194 (36%), Positives = 104/194 (53%), Gaps = 8/194 (4%)
Frame = -2
Query: 598 SKGELLTNCFKNRYTLQASTFQMAVLLQYNDNTSWTVRQLEQHTGIKGDFLIQVLQILLK 419
S GE + LQ +T QM +LLQ+N + + +QL I L + LQ L
Sbjct: 586 SSGESMKERKPEHKILQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLAL 645
Query: 418 AK----LLVCQ---EDEAELGENSVVDLYSGYKNKKLRVNINIPL-KTELKVEQEATHKH 263
K +LV + +D ++ + V+ +++K RV + + K E + E T +
Sbjct: 646 GKASQRILVRKNKGKDAIDMSDEFAVN--DNFQSKLTRVKVQMVTGKVESEPEIRETRQK 703
Query: 262 IEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYL 83
+E+DRK+ ++AAIVRIMK RK L H +LV EV QL RF P +IK+ I+ LIE+EYL
Sbjct: 704 VEDDRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYL 763
Query: 82 ERTEGEKDTYSYLA 41
R E + Y Y+A
Sbjct: 764 ARDEHDHRAYQYIA 777
Score = 28.7 bits (61), Expect(2) = 3e-25
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 691 LPTEXERSVHRFTTFYSSQHSGRKL 617
LP E + FT +Y+ +H+GRKL
Sbjct: 528 LPQELSVAYEMFTQYYTEKHTGRKL 552
>Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical protein
ZK856.1 protein.
Length = 765
Score = 101 bits (242), Expect = 5e-22
Identities = 71/239 (29%), Positives = 118/239 (49%), Gaps = 20/239 (8%)
Frame = -2
Query: 697 FQLPTEXERSVHRFTTFYSSQHSGRKLNWLYNMSKGELLTNCFK-NRYTLQASTFQMAVL 521
F LP E E V FY QH+GRKL W+++ S G ++ R+ L+ +TFQMAVL
Sbjct: 527 FSLPRELEDFVPEMEAFYKKQHNGRKLCWMHHWSSGTMVFGTANGGRFDLECTTFQMAVL 586
Query: 520 LQYND--NTSWTVRQLEQHTGIKGDFLIQVLQIL-----LKAKLLVCQEDEAELGENSVV 362
+ND + ++ L T + L + L L ++ ++L+C +
Sbjct: 587 FCFNDRAHDKISLETLRLATELPDAELNRTLLSLVAYPKMRYQILLCDVPSTTVTARDFT 646
Query: 361 D------------LYSGYKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAAIVR 218
D + +G ++ +VN+ L+ L+ E H+ I R++ +Q IV+
Sbjct: 647 DSTKFLINHDFNVVKNGKSQQRGKVNLIGRLQLSLEANAEKEHESIVALRELRVQEGIVK 706
Query: 217 IMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 41
I+KTRKT L +E++ L F P +IK+ ID LIE +Y+ER + +T+ Y++
Sbjct: 707 ILKTRKTYTLAQLTMELVEILKPLFIPNRKIIKEQIDWLIENKYMERRADDINTFVYIS 765
>U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein.
Length = 803
Score = 101 bits (242), Expect = 5e-22
Identities = 74/232 (31%), Positives = 123/232 (53%), Gaps = 15/232 (6%)
Frame = -2
Query: 691 LPTEXERSVHRFTTFYSSQHSGRKLNWLYNMSKGELLTNCFKN--RYTLQASTFQMAVLL 518
+P E ++ + FY QH R + W + ++ +++ F+ + L A+ +Q +LL
Sbjct: 576 IPKEMRDTLTDYQDFYRVQHGNRNVKWHHGLASA-VISASFRPGCKKELIATMYQTVILL 634
Query: 517 QYNDNTSWTVRQLEQHTGIKGDFLIQVLQILL--KAKLLVCQEDE---AELGENSVVDLY 353
+N +WTV ++ +HT I +++ + LL + K V Q E +E E +V +L
Sbjct: 635 LFNKCETWTVAEIVEHTKILEIEVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGTVENLK 694
Query: 352 -------SGYKNKKLRVNI-NIPLKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKT 197
S + K+ RV I + +KT ++ E + + + DR+ I AA+VRIMK RK
Sbjct: 695 NEKFVVNSKFTEKRCRVRIAQVNIKTAVE-ETKEVKEEVNSDRQYKIDAAVVRIMKARKQ 753
Query: 196 LKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 41
L HQ L+ E+L QL RF IKK ++ LIE+EY+ R E +Y+Y+A
Sbjct: 754 LNHQTLMTELLQQL--RFPVSTADIKKRLESLIEREYISRDPEEASSYNYVA 803
>U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein 4
protein.
Length = 840
Score = 101 bits (242), Expect = 5e-22
Identities = 74/232 (31%), Positives = 123/232 (53%), Gaps = 15/232 (6%)
Frame = -2
Query: 691 LPTEXERSVHRFTTFYSSQHSGRKLNWLYNMSKGELLTNCFKN--RYTLQASTFQMAVLL 518
+P E ++ + FY QH R + W + ++ +++ F+ + L A+ +Q +LL
Sbjct: 613 IPKEMRDTLTDYQDFYRVQHGNRNVKWHHGLASA-VISASFRPGCKKELIATMYQTVILL 671
Query: 517 QYNDNTSWTVRQLEQHTGIKGDFLIQVLQILL--KAKLLVCQEDE---AELGENSVVDLY 353
+N +WTV ++ +HT I +++ + LL + K V Q E +E E +V +L
Sbjct: 672 LFNKCETWTVAEIVEHTKILEIEVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGTVENLK 731
Query: 352 -------SGYKNKKLRVNI-NIPLKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKT 197
S + K+ RV I + +KT ++ E + + + DR+ I AA+VRIMK RK
Sbjct: 732 NEKFVVNSKFTEKRCRVRIAQVNIKTAVE-ETKEVKEEVNSDRQYKIDAAVVRIMKARKQ 790
Query: 196 LKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 41
L HQ L+ E+L QL RF IKK ++ LIE+EY+ R E +Y+Y+A
Sbjct: 791 LNHQTLMTELLQQL--RFPVSTADIKKRLESLIEREYISRDPEEASSYNYVA 840
>U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein.
Length = 780
Score = 95.1 bits (226), Expect = 4e-20
Identities = 67/182 (36%), Positives = 99/182 (54%), Gaps = 11/182 (6%)
Frame = -2
Query: 553 LQASTFQMAVLLQYNDNTSWTVR---QLEQHTGIKGDFLIQVLQILLKAK----LLVCQ- 398
LQ +T QM +LLQ N + + + QL I L + LQ L K +LV +
Sbjct: 601 LQVNTHQMIILLQLNHHNRISCQHEQQLMDELKIPERELKRNLQSLALGKASQRILVRKN 660
Query: 397 --EDEAELGENSVVDLYSGYKNKKLRVNINIPL-KTELKVEQEATHKHIEEDRKMLIQAA 227
+D ++ + V+ +++K RV + + K E + E T + +E+DRK+ ++AA
Sbjct: 661 KGKDAIDMSDEFAVN--DNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAA 718
Query: 226 IVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSY 47
IVRIMK RK L H +LV EV QL RF P +IK+ I+ LIE+EYL R E + Y Y
Sbjct: 719 IVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHDHRAYQY 778
Query: 46 LA 41
+A
Sbjct: 779 IA 780
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 691 LPTEXERSVHRFTTFYSSQHSGRKL 617
LP E + FT +Y+ +H+GRKL
Sbjct: 528 LPQELSVAYEMFTQYYTEKHTGRKL 552
>Z81085-3|CAB03115.1| 769|Caenorhabditis elegans Hypothetical
protein F46F3.4 protein.
Length = 769
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = -2
Query: 280 EATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSR--FKPRVPV 125
++ +KH+EE + AA +++ RK +HQ L+ NQ+S++ +PR V
Sbjct: 213 QSLNKHLEEMYRRRQTAAAAALVEQRKMQQHQILLARAANQVSTQEVIRPRASV 266
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 31.5 bits (68), Expect = 0.61
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = -2
Query: 379 GENSVVDLYSGYKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRK 200
GE+ + N K ++N LK EL + A HK I +D++ I+ RIMK +
Sbjct: 397 GESEQTLIEKVKNNSKAVASLNAQLKNELSYTK-AVHKRILKDKEQCIEELENRIMKL-E 454
Query: 199 TLK 191
TLK
Sbjct: 455 TLK 457
>AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical
protein Y71G12A.2 protein.
Length = 611
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 471 CCSSWRTVHEVLSLYCSSTAIWNVLACSVYLFLKQLVRSSPLLMLXSQFSLRPE 632
CC +W TV E LS+ + ++ V L L R L +L Q L PE
Sbjct: 404 CCWTWWTVSESLSICQLLCDVSHLNVAPVILSRLHLARFDALFVLAKQLKLNPE 457
>AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical
protein Y40B1B.7 protein.
Length = 123
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -2
Query: 304 KTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQ 185
K E KVEQE + +E +RK I I +I K +KT K Q
Sbjct: 72 KKERKVEQEK--RRLENERKAEIVQKITKIHKLKKTKKRQ 109
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Frame = -2
Query: 343 KNKK-LRVNINIPLKTEL-KVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVE 170
KN++ L+ N+ + + + K E+ K +EE K + + + + RKT++ E
Sbjct: 850 KNEEALKENLKLSMLLDREKSEKVKVQKELEEVEKQGREKLLEKEREFRKTMEEMEQNEE 909
Query: 169 VLNQLSSRFKPRVPVIKKCIDILIEKE-YLERTEGEK-DTYSYLA*SRQRRRKKDS 8
+ N L ++ + + K D+L E E +E+ EK D + R+ + ++DS
Sbjct: 910 IFNVLERKYNEQHKKVMKMNDVLREYERKIEQLNMEKTDLENENQKLRETQNRQDS 965
>Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical
protein W04D2.3 protein.
Length = 465
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 697 FQLPTEXER-SVHRFTTFYSSQHSGRKLNWLYNMSKGELLTNCFKNRYTL 551
FQ E ++ VH+ TF + Q+S ++W+Y +K N F Y +
Sbjct: 171 FQANMERKKVQVHKTVTFLNFQYSSGFISWIYLFTKVLYFLNVFAQLYLM 220
>AL110490-16|CAB54451.2| 922|Caenorhabditis elegans Hypothetical
protein Y48B6A.11 protein.
Length = 922
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = +2
Query: 467 GVLLQLADRPRGVVVVLQQHRH---LERARLQRVPVLEAVGEEFPLAHVVXPVQ--LAPG 631
G + ++ D PRGVV++ +H H + + Q+ VG+ + VV P Q G
Sbjct: 763 GFVCEVRDYPRGVVMICHKHEHSYLVNKTTQQQAYTNVKVGDFVFVEDVVEPPQKLFTRG 822
Query: 632 VLRRVERGEPV 664
+ R ++ E V
Sbjct: 823 AIVRADKKETV 833
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -1
Query: 593 GGTPHQLLQEQVHAAGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGASN 429
G P Q H++ EH+ + + V Q V P A H+ +PH+ A++
Sbjct: 695 GEVPQSPSSNQFHSS-EHIEEARQSPVTNQESVHSPHASEHFEHREVVPHSPAAS 748
>AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical
protein Y45G5AM.7 protein.
Length = 433
Score = 29.5 bits (63), Expect = 2.4
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Frame = -2
Query: 478 EQHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIPLKT 299
E+ D + + +L K K+ + +E E L E ++V+ K + L+ K
Sbjct: 200 ERKISNSSDEIFSLQDLLGKTKVQLEEETEKVLQERTIVE---NLKAQFLKERKESTEKI 256
Query: 298 EL-KVEQEATHKHIEEDRKMLIQAAIVRI----MKTRKTLKHQHLVVEVLNQLSSRFKPR 134
EL + E E K IEED + Q + K T+ HQ+ V+E L Q + +
Sbjct: 257 ELIQKEAEDYRKRIEEDIRNRQQRHKKEVDAHQEKFSATVNHQNAVIEELTQTVKQKQSE 316
Query: 133 VPVIK 119
+ +K
Sbjct: 317 IAELK 321
>AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical
protein Y39G10AR.11 protein.
Length = 788
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = -2
Query: 376 ENSVVDLYSGYKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAA-IVRIMK-TR 203
E V +L K+ +L + + + EL+ + TH +EE K L A +R+M+ T
Sbjct: 18 ERRVTELQDENKSLRLTLALRTDCEHELERVRNETHPGVEELEKKLASAENEIRVMESTN 77
Query: 202 KTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYS 50
K L + +QL + R ++K ++ E E +E + Y+
Sbjct: 78 KEL--MATLATTRDQLGKMLRERNQLVKDVDELHEEIEKMESLYNKPADYA 126
>Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 400 QEDEAELGENSV-VDLYSGYKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAAI 224
+EDE E E V S K K R+ KT K E+EA + +EE+++ AA+
Sbjct: 345 EEDEEESEEKEEKVKGKSNQKTVKERIRAEEARKTVEKEEEEAEEEAVEEEKEEKAAAAV 404
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.7 bits (61), Expect = 4.3
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = -2
Query: 454 DFLIQVLQILLKAKLLVCQ--EDEAELGENSVVDLYSGYKNKKLRVNINIPLKTEL-KVE 284
+F +Q+ + K ++L + E EA+L + D N +L + L+ +L +
Sbjct: 1694 EFAVQMDKYREKCEVLTAKIAELEAQLQNPAEEDQQQKTSNVEL-----VKLRQQLANAQ 1748
Query: 283 QEATHKHIE-EDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPV 125
Q+ +++ DR+ LI +I + KT++ HL ++ + + R PRVP+
Sbjct: 1749 QDMRVQNLTISDREGLIAEYRHQIAEQTKTIEELHLKLKTFSAAARRTSPRVPM 1802
>U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical
protein F07C3.3 protein.
Length = 791
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -2
Query: 214 MKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLE-RTEGEKDTYSY 47
M +KTL+ V+ N KP VP+ KK + +K E KD YSY
Sbjct: 233 MFIKKTLEVNAFVINCYNHSKKAVKPEVPIWKKPFPGMKDKNLPEDEILRVKDLYSY 289
>U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family
protein 2 protein.
Length = 423
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 298 PSSTVCLYSRAAFCSCTPSRDRQPSSRQAQPRPLDTPTVS 417
P T L + + S + S D +P+ ++ +P P TPT S
Sbjct: 267 PGKTASLPTHSPHPSESNSEDDEPTLKKCKPEPSQTPTTS 306
>AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 400 QEDEAELGENSV-VDLYSGYKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAAI 224
+EDE E E V S K K R+ KT K E+EA + +EE+++ AA+
Sbjct: 345 EEDEEESEEKEEKVKGKSNQKTVKERIRAEEARKTVEKEEEEAEEEAVEEEKEEKAAAAV 404
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 551 QRVPVLEAVGEEFPLAHVVXPVQLAPGVLRRVERGEPVHGALXLR 685
++ PV+ E V V+L+PG LR +ERG+ +H L+
Sbjct: 984 KKSPVIVDYKEYHTDTTVKFVVKLSPGKLRELERGQDLHQVFKLQ 1028
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 551 QRVPVLEAVGEEFPLAHVVXPVQLAPGVLRRVERGEPVHGALXLR 685
++ PV+ E V V+L+PG LR +ERG+ +H L+
Sbjct: 984 KKSPVIVDYKEYHTDTTVKFVVKLSPGKLRELERGQDLHQVFKLQ 1028
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -1
Query: 197 PEASALSGGSPQPVVVTVQAQSSCHQEMYRYTD*EGIFRAHRGREGHLQLPG 42
P+A+A + Q QAQ++ Q+ + + E A R G PG
Sbjct: 339 PQAAAAQHAAQQQAAAQAQAQAAAQQQQQQQREQEAAAAAQRNGAGRATTPG 390
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -1
Query: 197 PEASALSGGSPQPVVVTVQAQSSCHQEMYRYTD*EGIFRAHRGREGHLQLPG 42
P+A+A + Q QAQ++ Q+ + + E A R G PG
Sbjct: 339 PQAAAAQHAAQQQAAAQAQAQAAAQQQQQQQREQEAAAAAQRNGAGRATTPG 390
>U58758-1|AAB93429.2| 819|Caenorhabditis elegans Hypothetical
protein ZK1127.7 protein.
Length = 819
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 551 QRVPVLEAVGEEFPLAHVVXPVQLAPGVLRRVERGEPVHGALXLR 685
++ PV+ E V V+L+PG LR +ERG+ +H L+
Sbjct: 557 KKSPVIVDYKEYHTDTTVKFVVKLSPGKLRELERGQDLHQVFKLQ 601
>U39855-3|AAA81082.1| 467|Caenorhabditis elegans Patterned
expression site protein 8 protein.
Length = 467
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/58 (27%), Positives = 21/58 (36%)
Frame = -1
Query: 551 AGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGASNIIEGETVGVSRGRG*AW 378
AG +P G ++ PP G H PH ++ VG G G AW
Sbjct: 144 AGYAMPMGAYPIPIPPNIYPTPPFGGFHMPPHSPPHVQPPPVVNPGAVGTYTGYGGAW 201
>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical
protein W05B2.4 protein.
Length = 2265
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/63 (23%), Positives = 35/63 (55%)
Frame = -2
Query: 280 EATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDIL 101
E H H++ +R++L+++ + MK R +++ ++ +N+L +P IKK ++
Sbjct: 170 EKYHHHVKNNREILLRSQSLAAMKIRIFFENRKGLIFEVNELIDPEVGNIP-IKKFREVT 228
Query: 100 IEK 92
+ K
Sbjct: 229 LTK 231
>Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical
protein C25A1.7 protein.
Length = 970
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 193 KHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEY 86
KH V EV N L S P++ KK I + + EY
Sbjct: 868 KHMKFVYEVRNLLESTAGPKIDTSKKGIVLQVTPEY 903
>Z79754-1|CAB02090.1| 457|Caenorhabditis elegans Hypothetical
protein F25H2.1 protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -2
Query: 451 FLIQVLQILLKAKLLVCQEDEAELGENSVVDLY-SGYKNKKLRVNINIPLKTELKVEQEA 275
F I V ++ LKAK+ V + + + E+ +D Y SG + + VN I + + KV +A
Sbjct: 254 FRINVSKLSLKAKVTVKEFTKNKRKEHYTIDAYVSG--SPYVFVNKKIGKRWKFKVHSDA 311
Query: 274 THKHIEE 254
+K I E
Sbjct: 312 HNKTISE 318
>U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical
protein T12E12.1 protein.
Length = 482
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -2
Query: 640 SQHSGRKLNWLYNMSKGELLTNCFKNRYTLQASTFQMAVLL 518
++H+G ++W Y LLT C RYTLQ T+ A L
Sbjct: 388 NEHNGTWIDWQYLHKSVSLLTKC---RYTLQ-YTYPFAYFL 424
>AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRNA
synthetase (mitochondrial)protein.
Length = 972
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 193 KHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEY 86
KH V EV N L S P++ KK I + + EY
Sbjct: 868 KHMKFVYEVRNLLESTAGPKIDTSKKGIVLQVTPEY 903
>Z81079-3|CAB03083.2| 588|Caenorhabditis elegans Hypothetical
protein F39H11.3 protein.
Length = 588
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 590 GTPHQLLQEQVHAAGEHVPDGGAAAVQRQHLVDGPPA 480
G PHQ++Q+Q H H+ G + + +GP A
Sbjct: 433 GHPHQMMQQQQHPQQHHMQYQGMHDPMQGGMDEGPQA 469
>Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical
protein R09E10.5 protein.
Length = 1459
Score = 27.5 bits (58), Expect = 9.9
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +2
Query: 215 YPYYGGLYKHLSVLLNVFV 271
+PYYGGLY + ++ +N ++
Sbjct: 117 FPYYGGLYNYTTISVNGYL 135
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 27.5 bits (58), Expect = 9.9
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Frame = -2
Query: 397 EDEAELGENSVVDLYSGYKNKKLRVNINIPLKTELKV----EQEATHKHIEEDRKM---L 239
E+ L E + L S N+ LR I + L V ++ + I+ + K+ L
Sbjct: 159 ENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRL 218
Query: 238 IQAAIVRIMKTRKTLKHQHLVVEVLNQ----LSSRFKPRVPVIKKCIDILIEKEYLERTE 71
+V+ + KT+ H + E+ N L+ F+P P K +DI +++ +
Sbjct: 219 EDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRD 278
Query: 70 GEKDTY 53
E++T+
Sbjct: 279 YERETF 284
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 27.5 bits (58), Expect = 9.9
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Frame = -2
Query: 397 EDEAELGENSVVDLYSGYKNKKLRVNINIPLKTELKV----EQEATHKHIEEDRKM---L 239
E+ L E + L S N+ LR I + L V ++ + I+ + K+ L
Sbjct: 159 ENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRL 218
Query: 238 IQAAIVRIMKTRKTLKHQHLVVEVLNQ----LSSRFKPRVPVIKKCIDILIEKEYLERTE 71
+V+ + KT+ H + E+ N L+ F+P P K +DI +++ +
Sbjct: 219 EDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRD 278
Query: 70 GEKDTY 53
E++T+
Sbjct: 279 YERETF 284
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 27.5 bits (58), Expect = 9.9
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Frame = -2
Query: 397 EDEAELGENSVVDLYSGYKNKKLRVNINIPLKTELKV----EQEATHKHIEEDRKM---L 239
E+ L E + L S N+ LR I + L V ++ + I+ + K+ L
Sbjct: 159 ENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRL 218
Query: 238 IQAAIVRIMKTRKTLKHQHLVVEVLNQ----LSSRFKPRVPVIKKCIDILIEKEYLERTE 71
+V+ + KT+ H + E+ N L+ F+P P K +DI +++ +
Sbjct: 219 EDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRD 278
Query: 70 GEKDTY 53
E++T+
Sbjct: 279 YERETF 284
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,591,322
Number of Sequences: 27780
Number of extensions: 347258
Number of successful extensions: 1394
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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