Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_J19
(643 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 78 9e-15
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 75 6e-14
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 57 2e-08
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 54 1e-07
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 54 2e-07
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 54 2e-07
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 52 5e-07
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 49 5e-06
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 49 6e-06
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 43 4e-04
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 42 5e-04
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 42 7e-04
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 39 0.005
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 38 0.015
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 37 0.020
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 37 0.020
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 37 0.020
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 37 0.020
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 37 0.020
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 37 0.020
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 37 0.027
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 36 0.035
AE014134-3392|AAF53993.2| 241|Drosophila melanogaster CG2042-PA... 29 5.4
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 78.2 bits (184), Expect = 9e-15
Identities = 45/149 (30%), Positives = 78/149 (52%)
Frame = +1
Query: 70 GVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYVPHPSLQIFNEIKNLISVLP 249
G+ +LI+ + + + S C ++ I V+ Y+P + ++I ++ L
Sbjct: 68 GIGVLIKRNVPHTYRNINSSILCSALQLNFEQVINIVNAYIPPSQIFSSSDISEILQNLN 127
Query: 250 RPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDL 429
++LGD NS WGS +N+ G ++ ++ SL +LN GSPT L+ + ID+
Sbjct: 128 GSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPTHLS-THNTFTHIDI 186
Query: 430 SICTPQLASSLSWSTLCSTYNSDHYPIII 516
S+ +PQ+A SWS + + SDH+PI I
Sbjct: 187 SLISPQIAHMCSWSISDNLHGSDHFPITI 215
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 75.4 bits (177), Expect = 6e-14
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Frame = +1
Query: 67 GGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYVPHPSLQIFNE-IKNLISV 243
GGV LL+ S + + ++ + S Y+ P+ I N+ + N ++
Sbjct: 63 GGVRLLVHKSIQHTVLNITIDIEAIAINIESKLKLNIFSTYIS-PTKNITNQTLHNTFNI 121
Query: 244 LPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAI 423
P +I GDFN H WGS +N G +D L +LN SPT + + I
Sbjct: 122 QQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPTHFS-THNTYTHI 180
Query: 424 DLSICTPQLASSLSWSTLCSTYNSDHYPIIIS-FP 525
DL++C+P LA W L + SDH+PII + FP
Sbjct: 181 DLTLCSPILAPHAKWKILNDLHGSDHFPIITTLFP 215
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 56.8 bits (131), Expect = 2e-08
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 7/158 (4%)
Frame = +1
Query: 67 GGVCLLIRNSSTFSSFPL----PSHSNCFSV-IAAIVDGICFVSIYVPHPSLQIFNE-IK 228
GGV + +R +T FP H SV +A + + F +IY PS +I
Sbjct: 67 GGVAVFVR--TTLRHFPQRVIETRHIQLSSVKVATGLGDLQFSAIYCS-PSTRIEERHFT 123
Query: 229 NLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLT-KPG 405
++I + +++ GD+N+ H WG + ++ G EL + L + IL +GSPTR P
Sbjct: 124 DIIRACGQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPS 183
Query: 406 EVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS 519
S ID ++ + L+ T +SDH P+IIS
Sbjct: 184 HTPSCIDFAV-YHGIPDHLATITQSWDLDSDHLPLIIS 220
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 54.4 bits (125), Expect = 1e-07
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 6/157 (3%)
Frame = +1
Query: 67 GGVCLLIRNSSTFSSFPLPSHSNCF-----SVIAAIVDGICFVSIYVPHPSLQIFNEIKN 231
GG +LI+NS + FPL + +VI + I F ++Y P +E K+
Sbjct: 66 GGAAILIKNS--LAHFPLTPIATAKVQLAPAVIETALGPISFGAVYCPPRFAWTTDEFKD 123
Query: 232 LISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEV 411
++ F++ GD+N+ H WG+ SN G L +++ + L +G PTR
Sbjct: 124 ILEEFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYPYGCRG 183
Query: 412 ISA-IDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS 519
ID ++ L + S + +SDH P++I+
Sbjct: 184 SPGYIDFALTKGVLGIHANISAVVE-LSSDHLPLVIT 219
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/96 (29%), Positives = 47/96 (48%)
Frame = +1
Query: 235 ISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVI 414
IS + F+I GDFNS H +W + +N +G L ++ D+ IL PT +
Sbjct: 149 ISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPH-NHKA 207
Query: 415 SAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIISF 522
A L +C + + L+ + +SDH P++I +
Sbjct: 208 KASTLDLCLTNIPNQLANPAVMQELSSDHLPVVIKY 243
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/96 (29%), Positives = 47/96 (48%)
Frame = +1
Query: 235 ISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVI 414
IS + F+I GDFNS H +W + +N +G L ++ D+ IL PT +
Sbjct: 97 ISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPH-NHKA 155
Query: 415 SAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIISF 522
A L +C + + L+ + +SDH P++I +
Sbjct: 156 KASTLDLCLTNIPNQLANPAVMQELSSDHLPVVIKY 191
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 52.4 bits (120), Expect = 5e-07
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Frame = +1
Query: 154 AIVDGICFVSIYVP-HPSLQIFNE-IKNLISVLP--RPFMILGDFNSHHTSWGSSVSNSY 321
A + GI F S Y P S + F + ++ L++ RP +I GD N+ T WGS +SN+
Sbjct: 82 AKIRGIHFYSCYAPPSDSPEQFEDMLEKLVNHASGRRPTVIGGDLNAWATEWGSRISNTR 141
Query: 322 GYELLDILDMYSLCILNSG-SPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSD 498
G ++D +++ L +LN G PT G S ID++ + L + +W SD
Sbjct: 142 GRAVIDAMNLLDLVLLNDGFKPTFNNDRG--TSFIDVTFVSRVLVAGSNWMVHEDITLSD 199
Query: 499 H 501
H
Sbjct: 200 H 200
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 49.2 bits (112), Expect = 5e-06
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Frame = +1
Query: 160 VDGICFVSIYVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLD 339
V + ++Y+P I ++ K++ + L F+ GD+N+ H WG+ S G L +
Sbjct: 101 VGTVTVAAVYLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQE 160
Query: 340 ILDMYSLCILNSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPII 513
++ +L +G PT + P SA+D I L TL +SDH PI+
Sbjct: 161 VIAHGQYQVLATGEPTFYSYNPLLTPSALDFFITCGYGMGRLDVQTL-QELSSDHLPIL 218
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 48.8 bits (111), Expect = 6e-06
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 7/157 (4%)
Frame = +1
Query: 67 GGVCLLIRNSSTFSSFP--LPSHSNCFSVIAAIVDG--ICFVSIYVPHPSLQIFNEIKNL 234
GG +LIRN + +H S+ + D + ++Y P + + +
Sbjct: 65 GGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLTLAAVYCPPRFTVLEAQFLDF 124
Query: 235 ISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLD--ILDMYSLCILNSGSPTRLTKP-G 405
L F+ GD+N+ HT WGS + N G +L I L ++ GSPT
Sbjct: 125 FQALGPHFIAAGDYNAKHTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDLN 184
Query: 406 EVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIII 516
++ ID ++ T ++ SL + +SDH P++I
Sbjct: 185 KLPDLIDFAV-TKNISRSLVKAECLPDLSSDHSPVLI 220
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 42.7 bits (96), Expect = 4e-04
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Frame = +1
Query: 67 GGVCLLIRNSST---FSSFPLPSHSNCFSVIAAIVDG-ICFVSIYVPHPSLQIF-NEIKN 231
GG +LIRN ++F ++ S+ + +G ++Y P P I ++
Sbjct: 65 GGTGILIRNRIKHHHLNNFD-KNYLQSTSIALQLNNGSTTLAAVYCP-PRFPISEDQFME 122
Query: 232 LISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDM--YSLCILNSGSPTRL-TKP 402
+ L F+ GD+N+ HT WGS + + G +L + L L ++ G PT P
Sbjct: 123 FFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGKQLYNALTKPENKLDYVSPGKPTYWPADP 182
Query: 403 GEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS 519
++ ID +I T + ++ + + +SDH P+ ++
Sbjct: 183 RKIPDLIDFAI-TKHVPRNMVTAEALADLSSDHSPVFLN 220
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 42.3 bits (95), Expect = 5e-04
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Frame = +1
Query: 67 GGVCLLIRNSST---FSSFPLPSHSNCFSVIAAIVDG-ICFVSIYVPHPSLQIF-NEIKN 231
GG +LIRN ++F ++ S+ + +G ++Y P P I ++
Sbjct: 65 GGTGILIRNRIKHHHLNNFD-KNYLQSTSIALQLNNGSTTLAAVYCP-PRFPISEDQFME 122
Query: 232 LISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDM--YSLCILNSGSPTRL-TKP 402
+ L F+ GD+N+ HT WGS + G +L + L L ++ G PT P
Sbjct: 123 FFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGKQLYNALTKPENKLDYVSPGKPTYWPADP 182
Query: 403 GEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS 519
++ ID +I T + ++ + + +SDH P+ ++
Sbjct: 183 RKIPDLIDFAI-TKHVPRNMVTAEALADLSSDHSPVFLN 220
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 41.9 bits (94), Expect = 7e-04
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = +1
Query: 160 VDGICFVSIYVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLD 339
V + ++Y+P I ++ K++ + L F+ GD+N+ H WG+ S G L +
Sbjct: 101 VGTVTVAAVYLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQE 160
Query: 340 ILDMYSLCILNSGSPT 387
++ +L +G PT
Sbjct: 161 VIAHGQYQVLATGEPT 176
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 39.1 bits (87), Expect = 0.005
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Frame = +1
Query: 130 SNCFSVIAAIVDGICFVSI-YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSS 306
+N S + I C S+ + PH + N + + + ++ GD+N+ H WG
Sbjct: 118 NNRRSEMIVIASVYCPPSLSWSPHHFTDVLNFAEKTMGGQTK-LILCGDWNAKHRQWGCI 176
Query: 307 VSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLC 480
+ G L D + S+ I+ +GS T + SAID SIC +L +
Sbjct: 177 RACQRGAALYDAIQADSMAEIVATGSATHFPHDTRKSPSAIDFSIC-KRLGRYEKRISSS 235
Query: 481 STYNSDHYPIIISFPL 528
+ +SDH PI++ L
Sbjct: 236 AHLSSDHLPILLEINL 251
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 37.5 bits (83), Expect = 0.015
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Frame = +1
Query: 130 SNCFSVIAAIVDGICFVSI-YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSS 306
+N S + I C S+ ++PH + N + + + F++ GD+N+ H WG +
Sbjct: 106 NNRRSEMIVIASVYCPPSLRWLPHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCT 164
Query: 307 VSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLC 480
+ G L + + S I+ +G T + SAID SIC L +
Sbjct: 165 RACQRGTALYEAVQADSTAEIIATGCATHFPHDTRKNPSAIDFSIC-KGLGRFEKRISSG 223
Query: 481 STYNSDHYPIIISFPL 528
+ +SDH PI++ L
Sbjct: 224 ADLSSDHLPILLEINL 239
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 37.1 bits (82), Expect = 0.020
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Frame = +1
Query: 130 SNCFSVIAAIVDGICFVSI-YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSS 306
+N S + I C S+ + PH + N + + + F++ GD+N+ H WG +
Sbjct: 106 NNRRSEMIVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCT 164
Query: 307 VSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDLSIC--TPQLASSLSWST 474
+ G L + + + I+ +G T + SAID SIC +L +S S
Sbjct: 165 RACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSS- 223
Query: 475 LCSTYNSDHYPIIISFPL 528
+ +SDH PI++ L
Sbjct: 224 --ADLSSDHLPILLEINL 239
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 37.1 bits (82), Expect = 0.020
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Frame = +1
Query: 130 SNCFSVIAAIVDGICFVSI-YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSS 306
+N S + I C S+ + PH + N + + + F++ GD+N+ H WG +
Sbjct: 68 NNRRSEMIVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCT 126
Query: 307 VSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDLSIC--TPQLASSLSWST 474
+ G L + + + I+ +G T + SAID SIC +L +S S
Sbjct: 127 RACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSS- 185
Query: 475 LCSTYNSDHYPIIISFPL 528
+ +SDH PI++ L
Sbjct: 186 --ADLSSDHLPILLEINL 201
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.1 bits (82), Expect = 0.020
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = +1
Query: 208 QIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSP 384
++FN + L+ + F++ GD+N H WG+ +S + G L IL L I+ +G
Sbjct: 137 KLFNHFEMLLDGKSK-FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 385 TRLT-KPGEVISAIDLSICTPQLASSL-SWSTLCSTYNSDHYPIII 516
T + SA+D +IC L ++ST +SDH PI I
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQI 239
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 37.1 bits (82), Expect = 0.020
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Frame = +1
Query: 130 SNCFSVIAAIVDGICFVSI-YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSS 306
+N S + I C S+ + PH + N + + + F++ GD+N+ H WG +
Sbjct: 106 NNRRSEMIVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCT 164
Query: 307 VSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDLSIC--TPQLASSLSWST 474
+ G L + + + I+ +G T + SAID SIC +L +S S
Sbjct: 165 RACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSS- 223
Query: 475 LCSTYNSDHYPIIISFPL 528
+ +SDH PI++ L
Sbjct: 224 --ADLSSDHLPILLEINL 239
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.1 bits (82), Expect = 0.020
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = +1
Query: 208 QIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSP 384
++FN + L+ + F++ GD+N H WG+ +S + G L IL L I+ +G
Sbjct: 137 KLFNHFEMLLDGKSK-FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 385 TRLT-KPGEVISAIDLSICTPQLASSL-SWSTLCSTYNSDHYPIII 516
T + SA+D +IC L ++ST +SDH PI I
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQI 239
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.1 bits (82), Expect = 0.020
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = +1
Query: 208 QIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSP 384
++FN + L+ + F++ GD+N H WG+ +S + G L IL L I+ +G
Sbjct: 137 KLFNHFEMLLDGKSK-FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 385 TRLT-KPGEVISAIDLSICTPQLASSL-SWSTLCSTYNSDHYPIII 516
T + SA+D +IC L ++ST +SDH PI I
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQI 239
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 36.7 bits (81), Expect = 0.027
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Frame = +1
Query: 193 PHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-IL 369
PH + N + + + F++ GD+N+ H WG + + G L + + + I+
Sbjct: 12 PHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 70
Query: 370 NSGSPTRLT-KPGEVISAIDLSIC--TPQLASSLSWSTLCSTYNSDHYPIIISFPL 528
+G T + SAID SIC +L +S S + +SDH PI++ L
Sbjct: 71 ATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSS---ADLSSDHLPILLEINL 123
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 36.3 bits (80), Expect = 0.035
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Frame = +1
Query: 130 SNCFSVIAAIVDGICFVSI-YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSS 306
+N S + I C S+ + PH + N + + + F++ GD+N+ H WG +
Sbjct: 106 NNRRSEMIVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCT 164
Query: 307 VSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLC 480
+ G L + + + I+ +G T + SAID SIC L +
Sbjct: 165 RACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSIC-KGLGRLEKRISSV 223
Query: 481 STYNSDHYPIIISFPL 528
+ +SDH PI++ L
Sbjct: 224 ADLSSDHLPILLEINL 239
>AE014134-3392|AAF53993.2| 241|Drosophila melanogaster CG2042-PA
protein.
Length = 241
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 268 GDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVIS 417
GD+N+ H WG+ N G L +++ + L +G P R + + ++
Sbjct: 57 GDWNTSHWLWGAERCNRRGRALANLVLSTGMSSLVTGGPKRFQEAVDTLT 106
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,678,566
Number of Sequences: 53049
Number of extensions: 525664
Number of successful extensions: 1059
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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