Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_J13
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   2.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.5  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   2.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   3.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   4.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.9  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 480 NVEALPAVTVPFSFWN 527
           N +ALP +T P S WN
Sbjct: 38  NNQALPPITYPPSDWN 53


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 81  APPPPLQIEATP 116
           +PPPP QI A P
Sbjct: 329 SPPPPYQISAQP 340


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 480 NVEALPAVTVPFSFWN 527
           N +ALP +T P S WN
Sbjct: 29  NNQALPPITYPPSDWN 44


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 285  SHNATSSFLTPVFSNNLGMATAGAIGKSMGSHSPSA 392
            S  A SS    +  NN G A A + GK   SH  +A
Sbjct: 958  SLGALSSMFDSLSGNNTGDALAPSGGKKGSSHPLAA 993


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 69  ITDDAPPPPLQIEATPFS 122
           I +++PPP  Q  ATP S
Sbjct: 6   IYEESPPPAPQSAATPIS 23


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -2

Query: 640 DELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVT--AGNAS 485
           DE+ P PVP     P    E E  +    E+ T+ ST  QK   T T  +GN S
Sbjct: 389 DEIPPEPVPTPEPQPTQTTESEPTQA--SEQPTESSTT-QKPQTTKTPESGNES 439


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 27  YTLHFMLSTYIF 62
           +T+HF+L TY F
Sbjct: 92  FTVHFLLCTYYF 103


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 515 FLLEYRRQFCKLFKINSFILF 577
           F LEY++   + + I SF+LF
Sbjct: 135 FRLEYKQLLKRSYLIISFVLF 155


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 515 FLLEYRRQFCKLFKINSFILF 577
           F LEY++   + + I SF+LF
Sbjct: 135 FRLEYKQLLKRSYLIISFVLF 155


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 559 NFEKFTKLSTVFQKENGTVTAGNAS 485
           N +   K    FQ++   VT GN S
Sbjct: 509 NVDNSAKFKDGFQEQPNVVTVGNPS 533


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +3

Query: 540  FVNFSKLTLLYSSSSANITGAPLFC 614
            + N+S   L Y+S    +   P+ C
Sbjct: 1170 YTNYSMEVLAYTSGGDGVRTTPIHC 1194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,522
Number of Sequences: 336
Number of extensions: 3344
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)